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The map label for this gene is yidC [H]

Identifier: 124022319

GI number: 124022319

Start: 575574

End: 576707

Strand: Reverse

Name: yidC [H]

Synonym: P9303_06091

Alternate gene names: 124022319

Gene position: 576707-575574 (Counterclockwise)

Preceding gene: 124022320

Following gene: 124022318

Centisome position: 21.5

GC content: 50.26

Gene sequence:

>1134_bases
GTGATCGGGTACATCTCCGACAACATTCTGCTCCCGATCCTGGATTTCTTCTACGGATTAGTGCCGAGCTATGGCCTCGC
CATCGTCGCCCTCACAGTGGTCATCCGATTGGCACTGTTCCCCTTAAGTGCTGGATCCATTCGTAGCGCTCGTCGCATGC
GGATCGCCCAGCCGGCCATGAAGAAGCGCCAGGATGAAATCAAGAGCCGCTATGCCAAAGACCCTCAGAAGCAACAGGAG
GAACTAGGGAAAGTCATGAAGGAGTTCGGCAACCCTCTCTCAGGGTGCCTACCCCTATTGGTACAGATGCCAATTCTCTT
CGCCCTGTTTGCAACCCTTAGAGGATCACCTTTTGCTGATGTGCCTTACTTGGTGAACCTCAAGGTGCTGCCTAGCGACC
AAATTGCAGCCATTGAGCCCAAGCCATTTACCAGTAGCAAGCATTCAATTTTTATCAGTGAAACCAAACATTTCCCAGTC
ATTGCGTCTCTGCAAAGCGGCACAAAATTAGGAGTTGGAGACAAGGCCCAAATCAAGCTGCAAACGCTCACTGGCGAAAG
CTTCACAAGCAGGCTTTCTGGCGTAGAAGGTGGAACCAAGTTCACGCCAACCTGGAGCGTCACCAAGGGAGATGATCTTG
TCAAGGTGTCTGCCGATGGCACGATCCAGGCCTTGTCTGAAGGCGATGCCACCGTTCAAGGCAAAATTCCAGGCCTTGCT
GCCCAAAGTGGCTTTTTATTCATTAAGGCCCTTGGTCAAGTTGGTTTCTACGTCGATGGGGAAATCAACTGGGATATCGC
AATCCTGGTTGGTGGTTTCGGCTTGACGCTTTTGGTCTCACAAATACTGTCCGGCAGGGGGCTACCTGCGAACCCTCAAC
AATCAACAGCCAACAAGATCACTCCAGTGATGATCACTGGCATGTTTTTGTTCTTTCCACTACCAGCAGGTGTATTGCTT
TATATGGTGATCGCAAACATCTTTCAAGCAGGTCAGACTTTTCTGCTTAGTCGTGAAGCCCTACCTGAGAACCTGCAAAA
AATCCTCAATGAACAGCAATCCAAACCTGCGTTAGCAACAGAAGCCATCGGTGGATCAGATCGCCTTCCCTTTGAACCCA
AAAAACGTAAATGA

Upstream 100 bases:

>100_bases
AAAGGGCTTTGCGGCTTAAATAGACCCCAGCCTGTAACTCAGCCATATAGGTGCTGATGCACACTGGCATCACAGTTCCA
TCCACCCTCAGCAATCGATC

Downstream 100 bases:

>100_bases
TCCCAGGGCTCCAACCCATTTCATTGCAAGACCTAAAAGCCTTGGCTGCTCCTCGACACTGGTCTATCGAGGGACATCTG
GACGAGATGGCCTCTCTCAC

Product: inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MIGYISDNILLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAMKKRQDEIKSRYAKDPQKQQE
ELGKVMKEFGNPLSGCLPLLVQMPILFALFATLRGSPFADVPYLVNLKVLPSDQIAAIEPKPFTSSKHSIFISETKHFPV
IASLQSGTKLGVGDKAQIKLQTLTGESFTSRLSGVEGGTKFTPTWSVTKGDDLVKVSADGTIQALSEGDATVQGKIPGLA
AQSGFLFIKALGQVGFYVDGEINWDIAILVGGFGLTLLVSQILSGRGLPANPQQSTANKITPVMITGMFLFFPLPAGVLL
YMVIANIFQAGQTFLLSREALPENLQKILNEQQSKPALATEAIGGSDRLPFEPKKRK

Sequences:

>Translated_377_residues
MIGYISDNILLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAMKKRQDEIKSRYAKDPQKQQE
ELGKVMKEFGNPLSGCLPLLVQMPILFALFATLRGSPFADVPYLVNLKVLPSDQIAAIEPKPFTSSKHSIFISETKHFPV
IASLQSGTKLGVGDKAQIKLQTLTGESFTSRLSGVEGGTKFTPTWSVTKGDDLVKVSADGTIQALSEGDATVQGKIPGLA
AQSGFLFIKALGQVGFYVDGEINWDIAILVGGFGLTLLVSQILSGRGLPANPQQSTANKITPVMITGMFLFFPLPAGVLL
YMVIANIFQAGQTFLLSREALPENLQKILNEQQSKPALATEAIGGSDRLPFEPKKRK
>Mature_377_residues
MIGYISDNILLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAMKKRQDEIKSRYAKDPQKQQE
ELGKVMKEFGNPLSGCLPLLVQMPILFALFATLRGSPFADVPYLVNLKVLPSDQIAAIEPKPFTSSKHSIFISETKHFPV
IASLQSGTKLGVGDKAQIKLQTLTGESFTSRLSGVEGGTKFTPTWSVTKGDDLVKVSADGTIQALSEGDATVQGKIPGLA
AQSGFLFIKALGQVGFYVDGEINWDIAILVGGFGLTLLVSQILSGRGLPANPQQSTANKITPVMITGMFLFFPLPAGVLL
YMVIANIFQAGQTFLLSREALPENLQKILNEQQSKPALATEAIGGSDRLPFEPKKRK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=117, Percent_Identity=34.1880341880342, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 40738; Mature: 40738

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGYISDNILLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAM
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KKRQDEIKSRYAKDPQKQQEELGKVMKEFGNPLSGCLPLLVQMPILFALFATLRGSPFAD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPYLVNLKVLPSDQIAAIEPKPFTSSKHSIFISETKHFPVIASLQSGTKLGVGDKAQIKL
CCEEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCEECCCCCCEEEE
QTLTGESFTSRLSGVEGGTKFTPTWSVTKGDDLVKVSADGTIQALSEGDATVQGKIPGLA
EEECCHHHHHHHCCCCCCCEECCEEEECCCCCEEEEECCCCEEECCCCCCEEEECCCCCC
AQSGFLFIKALGQVGFYVDGEINWDIAILVGGFGLTLLVSQILSGRGLPANPQQSTANKI
CCCCHHHEEEHHCCCEEECCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHCC
TPVMITGMFLFFPLPAGVLLYMVIANIFQAGQTFLLSREALPENLQKILNEQQSKPALAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
EAIGGSDRLPFEPKKRK
HCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIGYISDNILLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAM
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KKRQDEIKSRYAKDPQKQQEELGKVMKEFGNPLSGCLPLLVQMPILFALFATLRGSPFAD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPYLVNLKVLPSDQIAAIEPKPFTSSKHSIFISETKHFPVIASLQSGTKLGVGDKAQIKL
CCEEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCEECCCCCCEEEE
QTLTGESFTSRLSGVEGGTKFTPTWSVTKGDDLVKVSADGTIQALSEGDATVQGKIPGLA
EEECCHHHHHHHCCCCCCCEECCEEEECCCCCEEEEECCCCEEECCCCCCEEEECCCCCC
AQSGFLFIKALGQVGFYVDGEINWDIAILVGGFGLTLLVSQILSGRGLPANPQQSTANKI
CCCCHHHEEEHHCCCEEECCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHCC
TPVMITGMFLFFPLPAGVLLYMVIANIFQAGQTFLLSREALPENLQKILNEQQSKPALAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
EAIGGSDRLPFEPKKRK
HCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]