| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022318
Identifier: 124022318
GI number: 124022318
Start: 575047
End: 575577
Strand: Reverse
Name: 124022318
Synonym: P9303_06081
Alternate gene names: NA
Gene position: 575577-575047 (Counterclockwise)
Preceding gene: 124022319
Following gene: 124022317
Centisome position: 21.46
GC content: 51.41
Gene sequence:
>531_bases ATGATCCCAGGGCTCCAACCCATTTCATTGCAAGACCTAAAAGCCTTGGCTGCTCCTCGACACTGGTCTATCGAGGGACA TCTGGACGAGATGGCCTCTCTCACACCATTGAGAGGCAGCATCAGCGCCGAGCATCAAGGCAGCATTCTTGAAGTGAAAG GGAAATTCCAAACCATCGTCACCCTCTGCTGTGATCGATGCCTAAGCGAATTCAATCAAAACCTCGCCTGTAATACCGAA GAATTGATCTGGCTGAAGGGAAATGGTCCAAACCCAAACGAACTCAATGTCTCGAGCCATTCAGATGATATGGATGCACT GATGGAGTGCCTGGACCCTCGTGGCAGCTTTGACCCAGAACGTTGGGTTTTCGAACAACTGAGTCTGCAGATGCCTTTAG TCAAGCGTTGTGGGGCCGATTGTCCCGGTCCAGCTCAACTGCAGCCCTCAGCCAAAACCACTGCCGTTAAAGCTGAGGGA ACTGATCTCGATCCACGCTGGGCAGCATTACAAAAACTCAACTCGCCATGA
Upstream 100 bases:
>100_bases ACCTGCAAAAAATCCTCAATGAACAGCAATCCAAACCTGCGTTAGCAACAGAAGCCATCGGTGGATCAGATCGCCTTCCC TTTGAACCCAAAAAACGTAA
Downstream 100 bases:
>100_bases CGAGCTGGGATAACCACCTGGATCTGCTGATCAGAGCCAGAACACCTCTCCTTTGGATTCGTAGCAGCGAAGAGGAACGT GTTGAAGTGCTACTTGAGCA
Product: metal-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MIPGLQPISLQDLKALAAPRHWSIEGHLDEMASLTPLRGSISAEHQGSILEVKGKFQTIVTLCCDRCLSEFNQNLACNTE ELIWLKGNGPNPNELNVSSHSDDMDALMECLDPRGSFDPERWVFEQLSLQMPLVKRCGADCPGPAQLQPSAKTTAVKAEG TDLDPRWAALQKLNSP
Sequences:
>Translated_176_residues MIPGLQPISLQDLKALAAPRHWSIEGHLDEMASLTPLRGSISAEHQGSILEVKGKFQTIVTLCCDRCLSEFNQNLACNTE ELIWLKGNGPNPNELNVSSHSDDMDALMECLDPRGSFDPERWVFEQLSLQMPLVKRCGADCPGPAQLQPSAKTTAVKAEG TDLDPRWAALQKLNSP >Mature_176_residues MIPGLQPISLQDLKALAAPRHWSIEGHLDEMASLTPLRGSISAEHQGSILEVKGKFQTIVTLCCDRCLSEFNQNLACNTE ELIWLKGNGPNPNELNVSSHSDDMDALMECLDPRGSFDPERWVFEQLSLQMPLVKRCGADCPGPAQLQPSAKTTAVKAEG TDLDPRWAALQKLNSP
Specific function: Unknown
COG id: COG1399
COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19305; Mature: 19305
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPGLQPISLQDLKALAAPRHWSIEGHLDEMASLTPLRGSISAEHQGSILEVKGKFQTIV CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHH TLCCDRCLSEFNQNLACNTEELIWLKGNGPNPNELNVSSHSDDMDALMECLDPRGSFDPE HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCHH RWVFEQLSLQMPLVKRCGADCPGPAQLQPSAKTTAVKAEGTDLDPRWAALQKLNSP HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MIPGLQPISLQDLKALAAPRHWSIEGHLDEMASLTPLRGSISAEHQGSILEVKGKFQTIV CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHH TLCCDRCLSEFNQNLACNTEELIWLKGNGPNPNELNVSSHSDDMDALMECLDPRGSFDPE HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCHH RWVFEQLSLQMPLVKRCGADCPGPAQLQPSAKTTAVKAEGTDLDPRWAALQKLNSP HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA