| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022299
Identifier: 124022299
GI number: 124022299
Start: 560104
End: 560856
Strand: Reverse
Name: 124022299
Synonym: P9303_05891
Alternate gene names: NA
Gene position: 560856-560104 (Counterclockwise)
Preceding gene: 124022302
Following gene: 124022297
Centisome position: 20.91
GC content: 54.45
Gene sequence:
>753_bases ATGAACCTGGCAGCGACCTATTTTGGTGCCAACGGTTGGTTGCTTGAGTTTGGTGCCTGCAGGGTGTTGGTGGATCCCTG GCTCACCGGTCAACTCTCCTTCCCACCAGGACCCTGGTTGCTGAATGGCAAGCTGCCCCGCGACTGGGCTGTGCCTGACA ACCTTGATCTGCTGCTTTTAAGCCAGGGGTTACCAGATCATGCCCACCCAGAAACGCTGCAGCTTCTTCCCAAGGATCTC AAGATCGTTGGCTCCCCCTCGGCCGCAAAACTGGTTGGCCGCTTGGGGTTTAAACAAGTGACCCCGTTGCATCCTGGAGA GAGCACCAACATCGCTGGACTCACCATCCGCGCGACCGCTGGAGCCATGGTGCCCTCGATAGAGAACGGTTATCTCATCA GCAATGCTGACGGCAAGATCTACCTTGAACCTCATGGTTTTCTCGACAGCAAAATCGAATCACAATCCGTTGATGCGGTG ATCAGCCCGGTGGTTGATCTTGGTTTGCCTCTTGCAGGGGCTTTTGTGAAAGGCCGTCAAGTCCTGCCTGAATTGCTCAA AAGATTTGAGCCAAAAACCGTCCTTGCCAGCACTGCTGGAGGGAATGTTCGCTTCGAGGGGCTGCTGAGCAGCTTTATGC AGATGGAGGGATCAGCAAAAGACGTTGCCGAAATGTTGCCTGCTCAGGTCAAGTTCATTGACCCAGAACCCGGCAAACGC TACGCCCTTACCTCCAAGCAATCTCTGGTTTAA
Upstream 100 bases:
>100_bases GGCAGCTGCCAGTTAAAAGAATTCCTACCTGCAAGACGGGTGCCTCCAGCAATCGATACCAGATCCCCGATAGGGTCAGA TCTCAGAACCTGATCAGATC
Downstream 100 bases:
>100_bases CCATCTAGCTCATGAGCCCCGTCAGCAAGCTCAAGAAAATCTCAAGCTGGCGAGATTGAGGCCATGACGAAGACAAAAGA AGGTGATGCTCGCAATCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MNLAATYFGANGWLLEFGACRVLVDPWLTGQLSFPPGPWLLNGKLPRDWAVPDNLDLLLLSQGLPDHAHPETLQLLPKDL KIVGSPSAAKLVGRLGFKQVTPLHPGESTNIAGLTIRATAGAMVPSIENGYLISNADGKIYLEPHGFLDSKIESQSVDAV ISPVVDLGLPLAGAFVKGRQVLPELLKRFEPKTVLASTAGGNVRFEGLLSSFMQMEGSAKDVAEMLPAQVKFIDPEPGKR YALTSKQSLV
Sequences:
>Translated_250_residues MNLAATYFGANGWLLEFGACRVLVDPWLTGQLSFPPGPWLLNGKLPRDWAVPDNLDLLLLSQGLPDHAHPETLQLLPKDL KIVGSPSAAKLVGRLGFKQVTPLHPGESTNIAGLTIRATAGAMVPSIENGYLISNADGKIYLEPHGFLDSKIESQSVDAV ISPVVDLGLPLAGAFVKGRQVLPELLKRFEPKTVLASTAGGNVRFEGLLSSFMQMEGSAKDVAEMLPAQVKFIDPEPGKR YALTSKQSLV >Mature_250_residues MNLAATYFGANGWLLEFGACRVLVDPWLTGQLSFPPGPWLLNGKLPRDWAVPDNLDLLLLSQGLPDHAHPETLQLLPKDL KIVGSPSAAKLVGRLGFKQVTPLHPGESTNIAGLTIRATAGAMVPSIENGYLISNADGKIYLEPHGFLDSKIESQSVDAV ISPVVDLGLPLAGAFVKGRQVLPELLKRFEPKTVLASTAGGNVRFEGLLSSFMQMEGSAKDVAEMLPAQVKFIDPEPGKR YALTSKQSLV
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26802; Mature: 26802
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLAATYFGANGWLLEFGACRVLVDPWLTGQLSFPPGPWLLNGKLPRDWAVPDNLDLLLL CCEEEEEECCCCCEEEECCEEEEECCCCCCEECCCCCCEEECCCCCCCCCCCCCCCEEEE SQGLPDHAHPETLQLLPKDLKIVGSPSAAKLVGRLGFKQVTPLHPGESTNIAGLTIRATA ECCCCCCCCCHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECC GAMVPSIENGYLISNADGKIYLEPHGFLDSKIESQSVDAVISPVVDLGLPLAGAFVKGRQ CCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH VLPELLKRFEPKTVLASTAGGNVRFEGLLSSFMQMEGSAKDVAEMLPAQVKFIDPEPGKR HHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCCE YALTSKQSLV EEECCCCCCC >Mature Secondary Structure MNLAATYFGANGWLLEFGACRVLVDPWLTGQLSFPPGPWLLNGKLPRDWAVPDNLDLLLL CCEEEEEECCCCCEEEECCEEEEECCCCCCEECCCCCCEEECCCCCCCCCCCCCCCEEEE SQGLPDHAHPETLQLLPKDLKIVGSPSAAKLVGRLGFKQVTPLHPGESTNIAGLTIRATA ECCCCCCCCCHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECC GAMVPSIENGYLISNADGKIYLEPHGFLDSKIESQSVDAVISPVVDLGLPLAGAFVKGRQ CCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH VLPELLKRFEPKTVLASTAGGNVRFEGLLSSFMQMEGSAKDVAEMLPAQVKFIDPEPGKR HHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCCE YALTSKQSLV EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA