| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022274
Identifier: 124022274
GI number: 124022274
Start: 544631
End: 545677
Strand: Reverse
Name: 124022274
Synonym: P9303_05641
Alternate gene names: NA
Gene position: 545677-544631 (Counterclockwise)
Preceding gene: 124022275
Following gene: 124022273
Centisome position: 20.34
GC content: 56.06
Gene sequence:
>1047_bases ATGCCTGAAACCGACCTCCCCCTCCGCAAACAGCCTCCCCCTGGGCAGACTTCTCCTGAACAGCTTGCGCCTGAACAGCC TTCTCCTCAACAGCCGTCTCCTGAACAGCTATCTCCTGAACAGCCCTCAAATAACTCAGCAGACTCTCAATCCGATCTCC TAGCTGCTCCTCAAGACAAACCAGATCTTGATCCACTCCTGCAAGTGGCCTTAACGGAGCTGCAGCAACGTCGCGATCAA CTCGAAGCAGAAATCAAAGACCTCTCCAACCGCAAATCCCAACTGGAAAAGGAGCTCAGCAGTTCCTTCGCTGGTCAATC CGATGCTATTGCCAGGCGGGTCAAAGGCTTCCAGGACTACCTCACAGGCGCTCTGCAAGACCTGGCCCAATCAGTGGAGC AACTTGAACTGGTTGTGCAGCCTGTTGTGGTCCAACCTTCTCCCCTAGACCAACCCAATTCAACGCCCGAGGCTGCCGCT CAGGGCAACGCCCTAGCAGTTGCTGACACCTTTAAACCAGACGAAAGCCTGATCCGTGAATGTCTGGAGCAATTTCTAAG TCAGCCAGACTTCTACGCCGATCCTTGGAAACTGCGACGCAGCCTTGATCCCAGGGACAAAGAACTTCTAGAAGACTGGT TTTTCAATCAGGGTGGGCGAGGAGCGCAGCCAAGCCGGAACAGCCGAACACGCAACATCCTTGTAGCGGCAGCCCTGATT GCCATCCTCGGTGAACTCTATGGCGACCGATTCCAAAGCCTGGTGCTTGCCGGCGAACCAGAGCGGCTTGGCGAATGGCG ACGTGGCCTTCAAGATGCTCTGGGCCTCGCTCGAGAAGACTTCGGCCCAAGCAGCGGCATTGTTCTTTTTGAACGCGGCG AAGCTCTTGTAGAACGCGCCGACCGACTTGAGGAACGAGGGGAAGTCCCCCTCATCCTGATTGATGCAGCCCAACGCAGC GTAGAGATCCCCGTGCTTCAGTTCCCTCTCTGGCTAGCCTTTGCAGCTGGGCCGCAAGAACGGTTCGAAGACGAAGAACT GCTCTGA
Upstream 100 bases:
>100_bases CCTAAATCGGTGATGGGTCCAGATCGGCCCTCTCTCATCAACTCCCCAAACAGACCCAACATCTCTCCTGAGAGCAATAC CACCACTGCCTGCCTGGTTC
Downstream 100 bases:
>100_bases TGATGTTCAACTCTCTATTTGGGAGTCTTCTCTCTCTAGTCATGGGATATCTGCTGGGTTCACTGCCCAGCGGATATCTT GCAGCCCAATGGTTGGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MPETDLPLRKQPPPGQTSPEQLAPEQPSPQQPSPEQLSPEQPSNNSADSQSDLLAAPQDKPDLDPLLQVALTELQQRRDQ LEAEIKDLSNRKSQLEKELSSSFAGQSDAIARRVKGFQDYLTGALQDLAQSVEQLELVVQPVVVQPSPLDQPNSTPEAAA QGNALAVADTFKPDESLIRECLEQFLSQPDFYADPWKLRRSLDPRDKELLEDWFFNQGGRGAQPSRNSRTRNILVAAALI AILGELYGDRFQSLVLAGEPERLGEWRRGLQDALGLAREDFGPSSGIVLFERGEALVERADRLEERGEVPLILIDAAQRS VEIPVLQFPLWLAFAAGPQERFEDEELL
Sequences:
>Translated_348_residues MPETDLPLRKQPPPGQTSPEQLAPEQPSPQQPSPEQLSPEQPSNNSADSQSDLLAAPQDKPDLDPLLQVALTELQQRRDQ LEAEIKDLSNRKSQLEKELSSSFAGQSDAIARRVKGFQDYLTGALQDLAQSVEQLELVVQPVVVQPSPLDQPNSTPEAAA QGNALAVADTFKPDESLIRECLEQFLSQPDFYADPWKLRRSLDPRDKELLEDWFFNQGGRGAQPSRNSRTRNILVAAALI AILGELYGDRFQSLVLAGEPERLGEWRRGLQDALGLAREDFGPSSGIVLFERGEALVERADRLEERGEVPLILIDAAQRS VEIPVLQFPLWLAFAAGPQERFEDEELL >Mature_347_residues PETDLPLRKQPPPGQTSPEQLAPEQPSPQQPSPEQLSPEQPSNNSADSQSDLLAAPQDKPDLDPLLQVALTELQQRRDQL EAEIKDLSNRKSQLEKELSSSFAGQSDAIARRVKGFQDYLTGALQDLAQSVEQLELVVQPVVVQPSPLDQPNSTPEAAAQ GNALAVADTFKPDESLIRECLEQFLSQPDFYADPWKLRRSLDPRDKELLEDWFFNQGGRGAQPSRNSRTRNILVAAALIA ILGELYGDRFQSLVLAGEPERLGEWRRGLQDALGLAREDFGPSSGIVLFERGEALVERADRLEERGEVPLILIDAAQRSV EIPVLQFPLWLAFAAGPQERFEDEELL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38639; Mature: 38507
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETDLPLRKQPPPGQTSPEQLAPEQPSPQQPSPEQLSPEQPSNNSADSQSDLLAAPQDK CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC PDLDPLLQVALTELQQRRDQLEAEIKDLSNRKSQLEKELSSSFAGQSDAIARRVKGFQDY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LTGALQDLAQSVEQLELVVQPVVVQPSPLDQPNSTPEAAAQGNALAVADTFKPDESLIRE HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHH CLEQFLSQPDFYADPWKLRRSLDPRDKELLEDWFFNQGGRGAQPSRNSRTRNILVAAALI HHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH AILGELYGDRFQSLVLAGEPERLGEWRRGLQDALGLAREDFGPSSGIVLFERGEALVERA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH DRLEERGEVPLILIDAAQRSVEIPVLQFPLWLAFAAGPQERFEDEELL HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCC >Mature Secondary Structure PETDLPLRKQPPPGQTSPEQLAPEQPSPQQPSPEQLSPEQPSNNSADSQSDLLAAPQDK CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC PDLDPLLQVALTELQQRRDQLEAEIKDLSNRKSQLEKELSSSFAGQSDAIARRVKGFQDY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LTGALQDLAQSVEQLELVVQPVVVQPSPLDQPNSTPEAAAQGNALAVADTFKPDESLIRE HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHH CLEQFLSQPDFYADPWKLRRSLDPRDKELLEDWFFNQGGRGAQPSRNSRTRNILVAAALI HHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH AILGELYGDRFQSLVLAGEPERLGEWRRGLQDALGLAREDFGPSSGIVLFERGEALVERA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH DRLEERGEVPLILIDAAQRSVEIPVLQFPLWLAFAAGPQERFEDEELL HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA