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The map label for this gene is lytB [H]

Identifier: 124022245

GI number: 124022245

Start: 518310

End: 519728

Strand: Direct

Name: lytB [H]

Synonym: P9303_05351

Alternate gene names: 124022245

Gene position: 518310-519728 (Clockwise)

Preceding gene: 124022244

Following gene: 124022246

Centisome position: 19.32

GC content: 60.82

Gene sequence:

>1419_bases
ATGGGATTGGTCGGTGGGGTCACACTCACGGCCGTAAGCCCCGCTGCCCAGGTGATTGCTGTGCAGGAGCCAGTGATGCG
GGTGCTGGTGCTGGAAGCAGCAGCTCTGCGTCTGCGGGCCGATGCTGAGCAGCCTTTGCTTGTGGCAGGCCTGGGCTCGA
GCGAGCAGAGGCTGAGGGCGCTTTCGGTTCGTAAGCAGCGCGGTCAGCTGCAGCTGACACTGGAGGGGCGATCGCGGCGA
TCAGTTTCGCTTGCTTTGCAGCGTGAGCTCAGGGTTCGCAGTGCAGACCCACGCGGGATATGGCTGGGCAAGCGTCGCTA
TCGCGGTGAGTTGAGGGTTCGATCTGTTGGAGCAGGCTTGCAGGTGGTTAACCACCTGCGCGTGGAGGACTATCTGGCCA
GTGTGGTTGGCAGTGAGATGCCGGAATCCTGGCCGCTGGCTGCATTGCAGGCCCAGGCGGTGGCCGCTCGCACCTATGCC
CTTGCTCAACACGGCAAAGCAGGTGGTTTTGATCTCAAGGCCACCGTTGCCAGTCAGGTGTATCGCGGCGTGGAATCTGA
AACCGCCAACACCTTGAAGGCAGTCGAAAGCACCCATTCGCTGGTTTTAGTGCATGGCGGCAAGTTGATCGATGCTGTTT
TTCACAGCAGCTCTGGCGGGGCAACAGAAGCCAGCGGGGCGGTATGGACCAAGCAGCTGCCTTATCTGGTCAGCGTGCCG
GATCACGATCAACACAGCCCTGTACATCAGTGGGACGTGTGGTTTGAGCCGCATCAGTTGCGAAGAGCGTTCCGCGAAAC
CGGTGGTGTGAGCAGCATTGATGTGTTGGGCACCACGGGCACGGGCAGAATTCGCCAGGCTCGTGTAGAGGGGCCTCGTG
GTGATTTGCTGCTGAGCGGCAAGCAGCTGCGCCAGCGTTTGGGCTTGAAGAGCACCTTGGTGCGCTTTGAAATGCTTGCC
TCGAAGTCAGCAAAGCCTGGCGCAGGCGTTGGCCGTCAGCGCTTTGAGCACAGCTTTGGAGATAGAAACTCTGCTGGGGC
TGGCACGGTGTTGATGGGGTCTTGGCGTGATGGCGCAACAGGCAAGAGCTTGTTTGCACCCAGCGTTGATGCCAATGCCA
GTTTCATGGGCCTGACCCCGCCGCCGCCTGTGCCGCCTCTGCCGGTTCGCTCAACACGCCGTTCGCGCCATCAGCCGCTG
ATGTTGCTGGCGATGGGGCAAGGTTTTGGCCATGGCGTCGGCATGAGTCAGTGGGGTGCCCATGGCCTGGCGCAACGGGG
TGCAGATTTCCGCCAAATCCTCAATCACTACTACCGAGGCGCAGAGATTGTTCCCTATCGGCAGCTGCAGAATTCCTCTT
TGGCCTTCCTGTGGCGCTCTCGCCAGCCTGGAGGAGTTGAGAGAATGGGAGGCGCCTAA

Upstream 100 bases:

>100_bases
TGCTGCCATGGCTTGGGGCCTGGCCTGGTTGTTGTGATCGGGGCACACTGAATGTCCTTGTTGAACATGTTGATTGGCTT
TGCCAGCGCCGCTATGGGCT

Downstream 100 bases:

>100_bases
TTGAACCTCTTGCGGCCTTCTGTGGCCTCTGAGCAAGGGTTCGCAAGCACGATCACGGTGCGAGAGAACCTGCCAAGCCT
TGTGGAAGCGGTTGTTGATG

Product: sporulation protein SpoIID

Products: NA

Alternate protein names: Cell wall-associated polypeptide CWBP76; CWBP76; Modifier protein of major autolysin [H]

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MGLVGGVTLTAVSPAAQVIAVQEPVMRVLVLEAAALRLRADAEQPLLVAGLGSSEQRLRALSVRKQRGQLQLTLEGRSRR
SVSLALQRELRVRSADPRGIWLGKRRYRGELRVRSVGAGLQVVNHLRVEDYLASVVGSEMPESWPLAALQAQAVAARTYA
LAQHGKAGGFDLKATVASQVYRGVESETANTLKAVESTHSLVLVHGGKLIDAVFHSSSGGATEASGAVWTKQLPYLVSVP
DHDQHSPVHQWDVWFEPHQLRRAFRETGGVSSIDVLGTTGTGRIRQARVEGPRGDLLLSGKQLRQRLGLKSTLVRFEMLA
SKSAKPGAGVGRQRFEHSFGDRNSAGAGTVLMGSWRDGATGKSLFAPSVDANASFMGLTPPPPVPPLPVRSTRRSRHQPL
MLLAMGQGFGHGVGMSQWGAHGLAQRGADFRQILNHYYRGAEIVPYRQLQNSSLAFLWRSRQPGGVERMGGA

Sequences:

>Translated_472_residues
MGLVGGVTLTAVSPAAQVIAVQEPVMRVLVLEAAALRLRADAEQPLLVAGLGSSEQRLRALSVRKQRGQLQLTLEGRSRR
SVSLALQRELRVRSADPRGIWLGKRRYRGELRVRSVGAGLQVVNHLRVEDYLASVVGSEMPESWPLAALQAQAVAARTYA
LAQHGKAGGFDLKATVASQVYRGVESETANTLKAVESTHSLVLVHGGKLIDAVFHSSSGGATEASGAVWTKQLPYLVSVP
DHDQHSPVHQWDVWFEPHQLRRAFRETGGVSSIDVLGTTGTGRIRQARVEGPRGDLLLSGKQLRQRLGLKSTLVRFEMLA
SKSAKPGAGVGRQRFEHSFGDRNSAGAGTVLMGSWRDGATGKSLFAPSVDANASFMGLTPPPPVPPLPVRSTRRSRHQPL
MLLAMGQGFGHGVGMSQWGAHGLAQRGADFRQILNHYYRGAEIVPYRQLQNSSLAFLWRSRQPGGVERMGGA
>Mature_471_residues
GLVGGVTLTAVSPAAQVIAVQEPVMRVLVLEAAALRLRADAEQPLLVAGLGSSEQRLRALSVRKQRGQLQLTLEGRSRRS
VSLALQRELRVRSADPRGIWLGKRRYRGELRVRSVGAGLQVVNHLRVEDYLASVVGSEMPESWPLAALQAQAVAARTYAL
AQHGKAGGFDLKATVASQVYRGVESETANTLKAVESTHSLVLVHGGKLIDAVFHSSSGGATEASGAVWTKQLPYLVSVPD
HDQHSPVHQWDVWFEPHQLRRAFRETGGVSSIDVLGTTGTGRIRQARVEGPRGDLLLSGKQLRQRLGLKSTLVRFEMLAS
KSAKPGAGVGRQRFEHSFGDRNSAGAGTVLMGSWRDGATGKSLFAPSVDANASFMGLTPPPPVPPLPVRSTRRSRHQPLM
LLAMGQGFGHGVGMSQWGAHGLAQRGADFRQILNHYYRGAEIVPYRQLQNSSLAFLWRSRQPGGVERMGGA

Specific function: Possibly involved in cell wall metabolism during spore formation. Enhances the amidase activity approximately threefold [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein. Secreted, cell wall. Note=Cell wall localization shown in PubMed:11987133 [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007253
- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF04122 CW_binding_2; PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 50951; Mature: 50820

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLVGGVTLTAVSPAAQVIAVQEPVMRVLVLEAAALRLRADAEQPLLVAGLGSSEQRLRA
CCCCCCEEEEEECCHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH
LSVRKQRGQLQLTLEGRSRRSVSLALQRELRVRSADPRGIWLGKRRYRGELRVRSVGAGL
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHCCCCEEEEECCCHH
QVVNHLRVEDYLASVVGSEMPESWPLAALQAQAVAARTYALAQHGKAGGFDLKATVASQV
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
YRGVESETANTLKAVESTHSLVLVHGGKLIDAVFHSSSGGATEASGAVWTKQLPYLVSVP
HHCCHHHHHHHHHHHHCCCCEEEEECCCEEEHHHCCCCCCCCCCCCCEEECCCCEEEECC
DHDQHSPVHQWDVWFEPHQLRRAFRETGGVSSIDVLGTTGTGRIRQARVEGPRGDLLLSG
CCCCCCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCEEECC
KQLRQRLGLKSTLVRFEMLASKSAKPGAGVGRQRFEHSFGDRNSAGAGTVLMGSWRDGAT
HHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCC
GKSLFAPSVDANASFMGLTPPPPVPPLPVRSTRRSRHQPLMLLAMGQGFGHGVGMSQWGA
CCCEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCHHHCC
HGLAQRGADFRQILNHYYRGAEIVPYRQLQNSSLAFLWRSRQPGGVERMGGA
HHHHHCCHHHHHHHHHHHCCCCEEEHHHHCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
GLVGGVTLTAVSPAAQVIAVQEPVMRVLVLEAAALRLRADAEQPLLVAGLGSSEQRLRA
CCCCCEEEEEECCHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH
LSVRKQRGQLQLTLEGRSRRSVSLALQRELRVRSADPRGIWLGKRRYRGELRVRSVGAGL
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHCCCCEEEEECCCHH
QVVNHLRVEDYLASVVGSEMPESWPLAALQAQAVAARTYALAQHGKAGGFDLKATVASQV
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
YRGVESETANTLKAVESTHSLVLVHGGKLIDAVFHSSSGGATEASGAVWTKQLPYLVSVP
HHCCHHHHHHHHHHHHCCCCEEEEECCCEEEHHHCCCCCCCCCCCCCEEECCCCEEEECC
DHDQHSPVHQWDVWFEPHQLRRAFRETGGVSSIDVLGTTGTGRIRQARVEGPRGDLLLSG
CCCCCCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCEEECC
KQLRQRLGLKSTLVRFEMLASKSAKPGAGVGRQRFEHSFGDRNSAGAGTVLMGSWRDGAT
HHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCC
GKSLFAPSVDANASFMGLTPPPPVPPLPVRSTRRSRHQPLMLLAMGQGFGHGVGMSQWGA
CCCEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCHHHCC
HGLAQRGADFRQILNHYYRGAEIVPYRQLQNSSLAFLWRSRQPGGVERMGGA
HHHHHCCHHHHHHHHHHHCCCCEEEHHHHCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1357079; 1356138; 9384377 [H]