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The map label for this gene is psbV

Identifier: 124022241

GI number: 124022241

Start: 516648

End: 517160

Strand: Reverse

Name: psbV

Synonym: P9303_05311

Alternate gene names: 124022241

Gene position: 517160-516648 (Counterclockwise)

Preceding gene: 124022243

Following gene: 124022240

Centisome position: 19.28

GC content: 55.17

Gene sequence:

>513_bases
ATGGCCTCTCTCTTTGCATCCCTGGGACGGTCCCTGATCAAACTATTGATCGTTTTGCCCGTAATAATTGGCTTGAGCAT
TAGCTCTCCGGCCATGGCTGCCCAATGGGATGCCGAGACCCTCACCGTTCCCGCAGGCTCAGGCGGACAGCAGGTGACCT
TCAGCGAGTCAGAAATCAAGAGCGCTAGCAAGCTCTTCAAAAGCAACTGCGCCACCTGCCATAACCAAGGCGTCACCAAG
ACCAATCAAAACGTTGGCCTCGACCTTGAGGCTCTCTCACTGGCATCACCTGCTCGTGACAACGTGGACGGCCTGGTCGA
ATTCCTGAAAAATCCCATGTCATATGACGGGGAATACAGCATTGCCGACACCCACCCAGGCATCAGCAGCAGCGATGTCT
ACGTTCAGATGCGCACGCTCAACGATGAGGACCTGCGCCTAATCGCCGGTTACATCCTCACGGCTGAGAAAGTACAGGGC
GACCAATGGGGTGGTGGCAAGATCTACTTCTGA

Upstream 100 bases:

>100_bases
TGAAGTCGCTCCGCGCTGCAACAGTTCTTGATTACGGCCCTTAGAGCTCCCGCCCCGTGATACAAGGTGTTGTCGCTTCT
GTCAGTAACTGGCGTATTCC

Downstream 100 bases:

>100_bases
TCCTTCAAGAAGAAAAAAGCAATCAGGGGATCTCAGCCAAAGCTGGGGTCCTTTTTTTTGCCTAAAAAATTGGCAGTGAT
CTCCCTCGCCAGAGTCTTGT

Product: cytochrome C-550

Products: NA

Alternate protein names: Cytochrome c550; Low-potential cytochrome c

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MASLFASLGRSLIKLLIVLPVIIGLSISSPAMAAQWDAETLTVPAGSGGQQVTFSESEIKSASKLFKSNCATCHNQGVTK
TNQNVGLDLEALSLASPARDNVDGLVEFLKNPMSYDGEYSIADTHPGISSSDVYVQMRTLNDEDLRLIAGYILTAEKVQG
DQWGGGKIYF

Sequences:

>Translated_170_residues
MASLFASLGRSLIKLLIVLPVIIGLSISSPAMAAQWDAETLTVPAGSGGQQVTFSESEIKSASKLFKSNCATCHNQGVTK
TNQNVGLDLEALSLASPARDNVDGLVEFLKNPMSYDGEYSIADTHPGISSSDVYVQMRTLNDEDLRLIAGYILTAEKVQG
DQWGGGKIYF
>Mature_169_residues
ASLFASLGRSLIKLLIVLPVIIGLSISSPAMAAQWDAETLTVPAGSGGQQVTFSESEIKSASKLFKSNCATCHNQGVTKT
NQNVGLDLEALSLASPARDNVDGLVEFLKNPMSYDGEYSIADTHPGISSSDVYVQMRTLNDEDLRLIAGYILTAEKVQGD
QWGGGKIYF

Specific function: Low-potential cytochrome c that plays a role in the oxygen-evolving complex of photosystem II

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Lumenal side. Note=Associated with photosystem II at the lumenal side of the thylakoid membrane (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family. PsbV subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CY550_PROM3 (A2C723)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001016548.1
- ProteinModelPortal:   A2C723
- SMR:   A2C723
- STRING:   A2C723
- GeneID:   4777252
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_05311
- eggNOG:   NOG13404
- HOGENOM:   HBG285698
- OMA:   WGGGKIY
- ProtClustDB:   PRK13617
- GO:   GO:0015979
- GO:   GO:0006810
- HAMAP:   MF_01378
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR016003
- InterPro:   IPR017851
- Gene3D:   G3DSA:1.10.760.10
- PIRSF:   PIRSF005890
- TIGRFAMs:   TIGR03045

Pfam domain/function: PF00034 Cytochrom_C; SSF46626 Cytochrome_c

EC number: NA

Molecular weight: Translated: 18160; Mature: 18029

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS51007 CYTC

Important sites: BINDING 70-70 BINDING 73-73

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLFASLGRSLIKLLIVLPVIIGLSISSPAMAAQWDAETLTVPAGSGGQQVTFSESEIK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEECCCCCCEEEECHHHHH
SASKLFKSNCATCHNQGVTKTNQNVGLDLEALSLASPARDNVDGLVEFLKNPMSYDGEYS
HHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEE
IADTHPGISSSDVYVQMRTLNDEDLRLIAGYILTAEKVQGDQWGGGKIYF
ECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEECC
>Mature Secondary Structure 
ASLFASLGRSLIKLLIVLPVIIGLSISSPAMAAQWDAETLTVPAGSGGQQVTFSESEIK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEECCCCCCEEEECHHHHH
SASKLFKSNCATCHNQGVTKTNQNVGLDLEALSLASPARDNVDGLVEFLKNPMSYDGEYS
HHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEE
IADTHPGISSSDVYVQMRTLNDEDLRLIAGYILTAEKVQGDQWGGGKIYF
ECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA