| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022233
Identifier: 124022233
GI number: 124022233
Start: 511228
End: 511794
Strand: Reverse
Name: 124022233
Synonym: P9303_05231
Alternate gene names: NA
Gene position: 511794-511228 (Counterclockwise)
Preceding gene: 124022240
Following gene: 124022232
Centisome position: 19.08
GC content: 53.97
Gene sequence:
>567_bases ATGGCTATTTGCGTTCTTGTTCTCGCCGAAAGAGACCACGCAGATCAATTGAATGAACAACTCAGGGCAGCAGAGACCCC GCTAACCCGCTGTGAGCTGATTCAGCCGGCAACCAACTCAGAAACACAACCTGAGAGAACGGCCTCAGAGGCCAATGGGA ATGGCAAGCCACTCCAATCGATCGACATTGATTCAATCGAGAGGCTGAGCCCCAAGCTGACCCGCAGCCGTCGTCAAAAA CTGATGGCCTTCTGGTTGCTGCCGTTTGGCTTCATCTTCGGCATCGTCATCACGCTCAGTACAGATATGGATACCTTTGC CAGTTACGGCAGCCTGGGTGCATCAATCATCGGAGGATTGCTGGGCCTCGTCTCAGGTTGGATGGGTAGTTATGCAGCCG CAATCAGCGTCAAAATTCCAAACGCTGAAGACGTTCGCATCCTGCGCAATCGCCATGACCAAGGCCAATGGCTGCTGCTG CTGGAGACACCGATGGGCATCGATTTGCCCTGGAAAGTGCTACGAGAAGCAAATCCCCTCGCCTTAACGAGCCTCAGCGA ACTGTGA
Upstream 100 bases:
>100_bases CCGGCGCAAGACTGCAGCAGGGCACTGTAGAGATCTACAGGCTCCAAGCCCTGCAGACCACAAAACAGGGTTCAGAATTC AAACGATTGAGGTGTGTTGT
Downstream 100 bases:
>100_bases TCTTGCCGCGGCAAGAGCTGCTCAAAGGTTGCCTGGATCCACAAGGCATGGAAGCCCTGCTGGTCCAGGCAGACTCAGTG CTACGGACCTGGCAGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MAICVLVLAERDHADQLNEQLRAAETPLTRCELIQPATNSETQPERTASEANGNGKPLQSIDIDSIERLSPKLTRSRRQK LMAFWLLPFGFIFGIVITLSTDMDTFASYGSLGASIIGGLLGLVSGWMGSYAAAISVKIPNAEDVRILRNRHDQGQWLLL LETPMGIDLPWKVLREANPLALTSLSEL
Sequences:
>Translated_188_residues MAICVLVLAERDHADQLNEQLRAAETPLTRCELIQPATNSETQPERTASEANGNGKPLQSIDIDSIERLSPKLTRSRRQK LMAFWLLPFGFIFGIVITLSTDMDTFASYGSLGASIIGGLLGLVSGWMGSYAAAISVKIPNAEDVRILRNRHDQGQWLLL LETPMGIDLPWKVLREANPLALTSLSEL >Mature_187_residues AICVLVLAERDHADQLNEQLRAAETPLTRCELIQPATNSETQPERTASEANGNGKPLQSIDIDSIERLSPKLTRSRRQKL MAFWLLPFGFIFGIVITLSTDMDTFASYGSLGASIIGGLLGLVSGWMGSYAAAISVKIPNAEDVRILRNRHDQGQWLLLL ETPMGIDLPWKVLREANPLALTSLSEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20672; Mature: 20541
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAICVLVLAERDHADQLNEQLRAAETPLTRCELIQPATNSETQPERTASEANGNGKPLQS CEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCC IDIDSIERLSPKLTRSRRQKLMAFWLLPFGFIFGIVITLSTDMDTFASYGSLGASIIGGL CCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LGLVSGWMGSYAAAISVKIPNAEDVRILRNRHDQGQWLLLLETPMGIDLPWKVLREANPL HHHHHHHHHHHEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCE ALTSLSEL EHHCHHCC >Mature Secondary Structure AICVLVLAERDHADQLNEQLRAAETPLTRCELIQPATNSETQPERTASEANGNGKPLQS EEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCC IDIDSIERLSPKLTRSRRQKLMAFWLLPFGFIFGIVITLSTDMDTFASYGSLGASIIGGL CCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LGLVSGWMGSYAAAISVKIPNAEDVRILRNRHDQGQWLLLLETPMGIDLPWKVLREANPL HHHHHHHHHHHEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCE ALTSLSEL EHHCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA