| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022227
Identifier: 124022227
GI number: 124022227
Start: 505990
End: 506631
Strand: Direct
Name: 124022227
Synonym: P9303_05171
Alternate gene names: NA
Gene position: 505990-506631 (Clockwise)
Preceding gene: 124022225
Following gene: 124022228
Centisome position: 18.86
GC content: 46.11
Gene sequence:
>642_bases GTGTCTTTGGATCTGATTGCTTGCTATCGCAACCCTGGTTTCGAGGCTGTTGCTGATGGGGTGATGTCATTCTTTGATCG GCGCCTTGATCTTCAACATAGTGGAGTCGCATTCGGCAATAACTCATCTTCATCCGAGGCAGAAGCAGCCAAAGTGTCAA CCGATATAAGCCTTGTTGCAATTGATCGTTCAGATCCAGAGGCATTTGCTCTTTCAGATGTGATTGTTCGGGGTGTCACT GCTGCTCTCGATCAATATCTTCAGGACCGTCCATTATTTAGAGACTGCTCCCCAGAGCAGTCTCTGTTTGTCATTCCGAT TTTTAATATCCAACGTTATGGCCCTGGTGAAGGCTTTAAGCGCTGGCATTGTGATTGGACTATCAGCGATGAGGCAACAG AGCCTGTTCATAGAATGCTTGCTTGGATCCTTTATTGCAATGATATTGATTCGGCTGGTACTGAGTTTTATTGGCAGCAA CATCATGAACCTGCAGAGCGAGGAAAGCTAGTCATTTTTCCTGCAGGCCCATCTCATATTCATCGCGGCCGAGTGAATTA TAAAAGCACTAAAACGATCTCTACAGGCTGGATTAATGCGGGCAGTAAAGACTCCTATCTTTCACGTTTGGCAGCCTCTT GA
Upstream 100 bases:
>100_bases CTCGGGGTCTTATTCGTTATGAACCTTTCTAGCTAATCGAGCTATAGAGGCATTCCTTTGAAAAGGTAATTAACTTGATA TCAATCCCAATTGAAAATCT
Downstream 100 bases:
>100_bases AACTTTGGTTCAAAAGCAAATTCTCAGATCAACATTGATAAGCTTTTCTCACCTAGTGGATTAAATGTTGATTCTGCGAC TCTTTAGTGAATTGTTGCCT
Product: mannitol dehydrogenase
Products: NA
Alternate protein names: Trypsin; Prolyl 4-Hydroxylase Alpha Subunit; Mannitol Dehydrogenase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; 2og-Fe(Ii) Oxygenase; 2-Oxoglutarate-Fe(Ii) Oxygenase Family; 2OG-Fe(II) Oxygenase Family Protein; 2-Oxoglutarate-Fe(II) Oxygenase Family Protein; Dioxygenase
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSLDLIACYRNPGFEAVADGVMSFFDRRLDLQHSGVAFGNNSSSSEAEAAKVSTDISLVAIDRSDPEAFALSDVIVRGVT AALDQYLQDRPLFRDCSPEQSLFVIPIFNIQRYGPGEGFKRWHCDWTISDEATEPVHRMLAWILYCNDIDSAGTEFYWQQ HHEPAERGKLVIFPAGPSHIHRGRVNYKSTKTISTGWINAGSKDSYLSRLAAS
Sequences:
>Translated_213_residues MSLDLIACYRNPGFEAVADGVMSFFDRRLDLQHSGVAFGNNSSSSEAEAAKVSTDISLVAIDRSDPEAFALSDVIVRGVT AALDQYLQDRPLFRDCSPEQSLFVIPIFNIQRYGPGEGFKRWHCDWTISDEATEPVHRMLAWILYCNDIDSAGTEFYWQQ HHEPAERGKLVIFPAGPSHIHRGRVNYKSTKTISTGWINAGSKDSYLSRLAAS >Mature_212_residues SLDLIACYRNPGFEAVADGVMSFFDRRLDLQHSGVAFGNNSSSSEAEAAKVSTDISLVAIDRSDPEAFALSDVIVRGVTA ALDQYLQDRPLFRDCSPEQSLFVIPIFNIQRYGPGEGFKRWHCDWTISDEATEPVHRMLAWILYCNDIDSAGTEFYWQQH HEPAERGKLVIFPAGPSHIHRGRVNYKSTKTISTGWINAGSKDSYLSRLAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23777; Mature: 23646
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDLIACYRNPGFEAVADGVMSFFDRRLDLQHSGVAFGNNSSSSEAEAAKVSTDISLVA CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHEECCEEEEE IDRSDPEAFALSDVIVRGVTAALDQYLQDRPLFRDCSPEQSLFVIPIFNIQRYGPGEGFK EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECCCCCCCC RWHCDWTISDEATEPVHRMLAWILYCNDIDSAGTEFYWQQHHEPAERGKLVIFPAGPSHI EEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHCCCEEEEECCCCHH HRGRVNYKSTKTISTGWINAGSKDSYLSRLAAS HCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCC >Mature Secondary Structure SLDLIACYRNPGFEAVADGVMSFFDRRLDLQHSGVAFGNNSSSSEAEAAKVSTDISLVA CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHEECCEEEEE IDRSDPEAFALSDVIVRGVTAALDQYLQDRPLFRDCSPEQSLFVIPIFNIQRYGPGEGFK EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECCCCCCCC RWHCDWTISDEATEPVHRMLAWILYCNDIDSAGTEFYWQQHHEPAERGKLVIFPAGPSHI EEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHCCCEEEEECCCCHH HRGRVNYKSTKTISTGWINAGSKDSYLSRLAAS HCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA