Click here to switch to the map view.

The map label for this gene is yfjD [C]

Identifier: 124022203

GI number: 124022203

Start: 487894

End: 488889

Strand: Reverse

Name: yfjD [C]

Synonym: P9303_04931

Alternate gene names: 124022203

Gene position: 488889-487894 (Counterclockwise)

Preceding gene: 124022204

Following gene: 124022202

Centisome position: 18.22

GC content: 57.83

Gene sequence:

>996_bases
ATGAGCAACGACCTGCTGGTCTTAACGCTATTGGTCGTTGTCGTTATCACCGGTTCTGCCTTGTGCTCAGGTGTGGAAGC
TGCACTACTCACAGTGAATCCTGTGCAAGTGCATGAGCTGGCAGCACGGCCCCAACCAATCGCTGGCGCTAGACGCTTAG
CCCAACTACGTCAACGGCTGGGACGGACTCTGTCTGTACTGGTGATCGCCAACAACGGCTTCAACATTTTCGGCAGCCTG
ATGCTTGGCGCCTTCGCGGCTTATGTCTTTGAGAAGCACAACATCAATGATGTGGCCTTGCCGTTGTTTTCGGTAGGTCT
CACATTGCTCGTGATCGTGCTGGGCGAGATCCTGCCGAAATCCCTCGGCAGCCGCCTGGCCCTCTCGGTTTCCCTCTCCA
GTGCCCCAGTGCTGCACCTGCTGGGCCTGCTGATGCGCCCTGTGGTGGTGTTGCTCGAGCGGTTATTGCCAGCAATTACC
GCCGAGAACGAACTGAGCACGAATGAGAATGAAATCAGGCTGCTGGCAAGGCTGGGGTCGCAAAAAGGGCAGATCGAAGC
CGATGAAGCTGCCATGATCGCCAAGGTGTTCCAACTCAACGACCTCACAGCCCGCGACCTGATGATCCCCCGGGTGGCAG
CTCCCACCCTCGATGCTGCTGCCAAACTTGAAACACTTCGCCCTGAACTGCTCACCCACAACGCCGAGTGGTGGGTCGTG
CTTGGCAAAGAAGTCGATAAAGTTCTTGGCGTGGCCAGCCGCGAAAGGCTGCTCACCGCCCTTCTGCAGGGTCAGGGTCA
CCTCACCCCTGCAGACCTCAGTGAAACGGTGGAATTTGTACCTGAAATGATTCGCGCCGATCGACTACTCACTGGCTTCC
GTCGTGACAACAGCGGTGTGAGAGTGGTGGTTGATGAGTTCGGCGGTTTCGTGGGCGTGATCGGAGCCGAAGCGGTCTTG
GCCGTACTGGCCGGCTGGTGGAGGAAGTCAAGCTGA

Upstream 100 bases:

>100_bases
TGCCCGAGACGGTCACACTGCGTGGCCATGATCAGGAGTCGCAAAAGCATTTACGACTTGTCGTGATCAACCACGACATC
CTTACCCCCCCCCGCCAGGC

Downstream 100 bases:

>100_bases
TGACGCAAGCACCCCCCTCCACACCCGAGCGCTGTCACCTTCTACTCAGCCAGTGGGTCAAACAACTATCGCTGAGTAAC
CGCGAATACAACCAATTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSNDLLVLTLLVVVVITGSALCSGVEAALLTVNPVQVHELAARPQPIAGARRLAQLRQRLGRTLSVLVIANNGFNIFGSL
MLGAFAAYVFEKHNINDVALPLFSVGLTLLVIVLGEILPKSLGSRLALSVSLSSAPVLHLLGLLMRPVVVLLERLLPAIT
AENELSTNENEIRLLARLGSQKGQIEADEAAMIAKVFQLNDLTARDLMIPRVAAPTLDAAAKLETLRPELLTHNAEWWVV
LGKEVDKVLGVASRERLLTALLQGQGHLTPADLSETVEFVPEMIRADRLLTGFRRDNSGVRVVVDEFGGFVGVIGAEAVL
AVLAGWWRKSS

Sequences:

>Translated_331_residues
MSNDLLVLTLLVVVVITGSALCSGVEAALLTVNPVQVHELAARPQPIAGARRLAQLRQRLGRTLSVLVIANNGFNIFGSL
MLGAFAAYVFEKHNINDVALPLFSVGLTLLVIVLGEILPKSLGSRLALSVSLSSAPVLHLLGLLMRPVVVLLERLLPAIT
AENELSTNENEIRLLARLGSQKGQIEADEAAMIAKVFQLNDLTARDLMIPRVAAPTLDAAAKLETLRPELLTHNAEWWVV
LGKEVDKVLGVASRERLLTALLQGQGHLTPADLSETVEFVPEMIRADRLLTGFRRDNSGVRVVVDEFGGFVGVIGAEAVL
AVLAGWWRKSS
>Mature_330_residues
SNDLLVLTLLVVVVITGSALCSGVEAALLTVNPVQVHELAARPQPIAGARRLAQLRQRLGRTLSVLVIANNGFNIFGSLM
LGAFAAYVFEKHNINDVALPLFSVGLTLLVIVLGEILPKSLGSRLALSVSLSSAPVLHLLGLLMRPVVVLLERLLPAITA
ENELSTNENEIRLLARLGSQKGQIEADEAAMIAKVFQLNDLTARDLMIPRVAAPTLDAAAKLETLRPELLTHNAEWWVVL
GKEVDKVLGVASRERLLTALLQGQGHLTPADLSETVEFVPEMIRADRLLTGFRRDNSGVRVVVDEFGGFVGVIGAEAVLA
VLAGWWRKSS

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=336, Percent_Identity=21.7261904761905, Blast_Score=75, Evalue=6e-14,
Organism=Escherichia coli, GI145693175, Length=318, Percent_Identity=24.5283018867925, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786879, Length=158, Percent_Identity=27.2151898734177, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 35623; Mature: 35492

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDLLVLTLLVVVVITGSALCSGVEAALLTVNPVQVHELAARPQPIAGARRLAQLRQRL
CCCCHHHHHHHHHHHHHHHHHHHCHHHHEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHH
GRTLSVLVIANNGFNIFGSLMLGAFAAYVFEKHNINDVALPLFSVGLTLLVIVLGEILPK
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLGSRLALSVSLSSAPVLHLLGLLMRPVVVLLERLLPAITAENELSTNENEIRLLARLGS
HCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
QKGQIEADEAAMIAKVFQLNDLTARDLMIPRVAAPTLDAAAKLETLRPELLTHNAEWWVV
CCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHCHHHHCCCCCEEEE
LGKEVDKVLGVASRERLLTALLQGQGHLTPADLSETVEFVPEMIRADRLLTGFRRDNSGV
ECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RVVVDEFGGFVGVIGAEAVLAVLAGWWRKSS
EEEHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNDLLVLTLLVVVVITGSALCSGVEAALLTVNPVQVHELAARPQPIAGARRLAQLRQRL
CCCHHHHHHHHHHHHHHHHHHHCHHHHEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHH
GRTLSVLVIANNGFNIFGSLMLGAFAAYVFEKHNINDVALPLFSVGLTLLVIVLGEILPK
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLGSRLALSVSLSSAPVLHLLGLLMRPVVVLLERLLPAITAENELSTNENEIRLLARLGS
HCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
QKGQIEADEAAMIAKVFQLNDLTARDLMIPRVAAPTLDAAAKLETLRPELLTHNAEWWVV
CCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHCHHHHCCCCCEEEE
LGKEVDKVLGVASRERLLTALLQGQGHLTPADLSETVEFVPEMIRADRLLTGFRRDNSGV
ECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RVVVDEFGGFVGVIGAEAVLAVLAGWWRKSS
EEEHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]