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The map label for this gene is atpE [H]

Identifier: 124022189

GI number: 124022189

Start: 476792

End: 477160

Strand: Direct

Name: atpE [H]

Synonym: P9303_04791

Alternate gene names: 124022189

Gene position: 476792-477160 (Clockwise)

Preceding gene: 124022188

Following gene: 124022190

Centisome position: 17.77

GC content: 59.62

Gene sequence:

>369_bases
ATGCGCGCAGGTCCGGCTTGTTCGGGCCCATCTCACAATCTCCGAGATGTCCCTGGCGCTGGTATCAACCTCTCGGTCCC
CATCCGCGCTGTTTTAGCGCCCCACACCTTTAGTTCAACCATGGATTCCATTACCACCGCCGCGTCTGTTGTTGCCGCTG
GTCTAGCTGTAGGCCTCGGGGCCATCGGCCCAGGTATCGGTCAGGGCACCGCTGCAGGCGGCGCTGTTGAGGGCATTGCC
CGCCAGCCTGAAGCTGAAGGCAAGATTCGCGGCACTCTGCTGCTCTCTTTTGCCTTTATGGAATCTCTCACCATCTATGG
CCTTGTGGTCGCCTTGGTGTTGCTGTTCGCCAATCCCTTCGCTGGTTGA

Upstream 100 bases:

>100_bases
TCGCCACCCTCGCCGCCTATTACATCGGTGAAGCGGTTGAAGAGCACCATTGATCAAACTCTGATCTAGCAAGGCCTAAC
CCCTCGGTCTGGCAAACTCC

Downstream 100 bases:

>100_bases
TCCAGATCGGAGTCGCTCGCTGGCTGCTCTCATCACCTCACGGCCATGGTTGTGAGTTGATCGGGACTCTTCCCAGAGGC
AATAATCGCTCTCCAGCATT

Product: F0F1 ATP synthase subunit C

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein [H]

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MRAGPACSGPSHNLRDVPGAGINLSVPIRAVLAPHTFSSTMDSITTAASVVAAGLAVGLGAIGPGIGQGTAAGGAVEGIA
RQPEAEGKIRGTLLLSFAFMESLTIYGLVVALVLLFANPFAG

Sequences:

>Translated_122_residues
MRAGPACSGPSHNLRDVPGAGINLSVPIRAVLAPHTFSSTMDSITTAASVVAAGLAVGLGAIGPGIGQGTAAGGAVEGIA
RQPEAEGKIRGTLLLSFAFMESLTIYGLVVALVLLFANPFAG
>Mature_122_residues
MRAGPACSGPSHNLRDVPGAGINLSVPIRAVLAPHTFSSTMDSITTAASVVAAGLAVGLGAIGPGIGQGTAAGGAVEGIA
RQPEAEGKIRGTLLLSFAFMESLTIYGLVVALVLLFANPFAG

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits [H]

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000454
- InterPro:   IPR005953
- InterPro:   IPR020537
- InterPro:   IPR002379 [H]

Pfam domain/function: PF00137 ATP-synt_C [H]

EC number: 3.6.3.14

Molecular weight: Translated: 12027; Mature: 12027

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGPACSGPSHNLRDVPGAGINLSVPIRAVLAPHTFSSTMDSITTAASVVAAGLAVGLG
CCCCCCCCCCCCCCCCCCCCCCEECCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
AIGPGIGQGTAAGGAVEGIARQPEAEGKIRGTLLLSFAFMESLTIYGLVVALVLLFANPF
HCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AG
CC
>Mature Secondary Structure
MRAGPACSGPSHNLRDVPGAGINLSVPIRAVLAPHTFSSTMDSITTAASVVAAGLAVGLG
CCCCCCCCCCCCCCCCCCCCCCEECCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
AIGPGIGQGTAAGGAVEGIARQPEAEGKIRGTLLLSFAFMESLTIYGLVVALVLLFANPF
HCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA