| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022154
Identifier: 124022154
GI number: 124022154
Start: 449695
End: 450486
Strand: Direct
Name: 124022154
Synonym: P9303_04441
Alternate gene names: NA
Gene position: 449695-450486 (Clockwise)
Preceding gene: 124022153
Following gene: 124022155
Centisome position: 16.76
GC content: 53.54
Gene sequence:
>792_bases ATGAGTGAAGCTTCTAGACAGCTAGAGGAAGGTCTGGCCAGCCTGGCCATTGATCCTGATGTCTTGGCCAAGGAGTTGGC GGCTGAACAGTTCGTTGATCCGCTTGACGAGATCAATCCTGATAATTCAGACGTGGCGCATGTGTGTGACGCAGGTCTTA ACTGGCTGAAGCAGGGCCATGAGGAGCGTCTGCAGGGACTAAGGGTGTTTTGTGAACATAGGGATCCCAGGGCAGTGGCT TTGCTGTTGCCCTTGTTGAAGGAGCCTTGTCCAGTTGAACGGATGAGTGCTGTTTATGCGTTAGGTCGAAATCCTTCCCC GCCAGCGTTAGACCCCCTTTTGCATTTGCTACAGGCTGATTGCAATGCCTATGTGCGTAAGGCAACCGCCTGGAGCCTGG GGAATTACGCCGATGCCCGCGTCCTCAACCCCCTCATTCATGTTCTTCAAAACGATGTGGCTGCGGTACGGCTATGGGCC ACCGGCTCATTGGCGGAAGCCGGTGGCACCTCTCCTGCTAATGCTGATATCGCTGCAATTCAATTACTGATGAGTTTGCA GATCGATGGTGAGCCTGTTGTGCGAAGTAACTGCATCTGGGCCCTCGGACGTCTTTACAACACGTTGGCTGAACCTCGTC GGCAGGAGTTGGTGGAGGCTTTTGTTGATTCTCTGCTCAACGATGCAGAGCTCTCGGTACGTGATGAGGCTCGCATCGCT CTTGAGCAGTTGGAGAACTCTGAGGTGATTCAGCGGCTTCAAACTCTTGTAGATGAAGGACGCTTGACCTGA
Upstream 100 bases:
>100_bases CTGGTGGCAGTGACTGCTCGTATCTGGTTGCCTGGGGACATGCTCGCGCCGGCTCCAATCGGGTGAGATCAGTCGGCCTA ATGCCTCTACGATCAAGGTC
Downstream 100 bases:
>100_bases AGGCTCAGATTGGATCCTTGATTTACTTGGGTCTTGTGACAATCAACACGTCAGCTCTTGAAGATGGAGGATATTATTTG GAACCCTTCTGATGAAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSEASRQLEEGLASLAIDPDVLAKELAAEQFVDPLDEINPDNSDVAHVCDAGLNWLKQGHEERLQGLRVFCEHRDPRAVA LLLPLLKEPCPVERMSAVYALGRNPSPPALDPLLHLLQADCNAYVRKATAWSLGNYADARVLNPLIHVLQNDVAAVRLWA TGSLAEAGGTSPANADIAAIQLLMSLQIDGEPVVRSNCIWALGRLYNTLAEPRRQELVEAFVDSLLNDAELSVRDEARIA LEQLENSEVIQRLQTLVDEGRLT
Sequences:
>Translated_263_residues MSEASRQLEEGLASLAIDPDVLAKELAAEQFVDPLDEINPDNSDVAHVCDAGLNWLKQGHEERLQGLRVFCEHRDPRAVA LLLPLLKEPCPVERMSAVYALGRNPSPPALDPLLHLLQADCNAYVRKATAWSLGNYADARVLNPLIHVLQNDVAAVRLWA TGSLAEAGGTSPANADIAAIQLLMSLQIDGEPVVRSNCIWALGRLYNTLAEPRRQELVEAFVDSLLNDAELSVRDEARIA LEQLENSEVIQRLQTLVDEGRLT >Mature_262_residues SEASRQLEEGLASLAIDPDVLAKELAAEQFVDPLDEINPDNSDVAHVCDAGLNWLKQGHEERLQGLRVFCEHRDPRAVAL LLPLLKEPCPVERMSAVYALGRNPSPPALDPLLHLLQADCNAYVRKATAWSLGNYADARVLNPLIHVLQNDVAAVRLWAT GSLAEAGGTSPANADIAAIQLLMSLQIDGEPVVRSNCIWALGRLYNTLAEPRRQELVEAFVDSLLNDAELSVRDEARIAL EQLENSEVIQRLQTLVDEGRLT
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28847; Mature: 28716
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEASRQLEEGLASLAIDPDVLAKELAAEQFVDPLDEINPDNSDVAHVCDAGLNWLKQGH CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHH EERLQGLRVFCEHRDPRAVALLLPLLKEPCPVERMSAVYALGRNPSPPALDPLLHLLQAD HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH CNAYVRKATAWSLGNYADARVLNPLIHVLQNDVAAVRLWATGSLAEAGGTSPANADIAAI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHEEEECCCCHHHCCCCCCCCHHHHHH QLLMSLQIDGEPVVRSNCIWALGRLYNTLAEPRRQELVEAFVDSLLNDAELSVRDEARIA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LEQLENSEVIQRLQTLVDEGRLT HHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SEASRQLEEGLASLAIDPDVLAKELAAEQFVDPLDEINPDNSDVAHVCDAGLNWLKQGH CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHH EERLQGLRVFCEHRDPRAVALLLPLLKEPCPVERMSAVYALGRNPSPPALDPLLHLLQAD HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH CNAYVRKATAWSLGNYADARVLNPLIHVLQNDVAAVRLWATGSLAEAGGTSPANADIAAI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHEEEECCCCHHHCCCCCCCCHHHHHH QLLMSLQIDGEPVVRSNCIWALGRLYNTLAEPRRQELVEAFVDSLLNDAELSVRDEARIA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LEQLENSEVIQRLQTLVDEGRLT HHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA