| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124022139
Identifier: 124022139
GI number: 124022139
Start: 430597
End: 431589
Strand: Direct
Name: 124022139
Synonym: P9303_04291
Alternate gene names: NA
Gene position: 430597-431589 (Clockwise)
Preceding gene: 124022138
Following gene: 124022140
Centisome position: 16.05
GC content: 45.22
Gene sequence:
>993_bases ATGATGCCTTCACGACGCTTAATAGCACTGATTGCAATTTCTACTTTTTCAATGTTGTCCTCTGAGGCCTTTGCAGAGCA ATCTCTGTATGAGCGCAATCCTGAGCAGGGGCAGGTCTTGGTTTCGATTGAACCAGATCAGCTTGAAGATGATGAGGTGG TCGAAGAGAATGAGGATGTATTGGAAGAGGATGATTGGAGAGTGTATTTAGACCTTTATGGATTCCTGCCATTATCGACA ACTGGAGACATCACAATCAATGGAAACACTGCGCCTATAGACTCGAGCCTTGCCGATGTTTTGGCTACGGTTACAGGGCT TTTTACAGGAAGGGCTTCTGTTGAATATGGGCGACTGGGCTTCATGGCTGGGATTATTTATGGCACGTCATCTGAGGATC AGAGTGGTACAAATAGTTTTGATGGTGAAGAACTTAATCCTCCAATTGATGGCCTGAAGCTTAATAGTAAATCAACTACA GATTTCAATCAGTCTGTAGTTGACCTTGCTCTGCGCTATCGCCTTGGTGCCATTGAACAGCCAGTCATGAAAACAGGCGA CTCCACTTTCATAGGCTTTGTTGGCGCACGAGTTATTGATGCAGGCATGGACATGGATATGTCTTTATCAGCAGATGTCA AAGTTAATGGCAGGACGTTAACAAAGAAGGAAATACCAGAGTTGGAGAAGAGCGCGAGCGGATCGATTGACCGCACCTGG GCTCAACCATTACTTGGCATGCAGGTGACTTATGCCATGAGTCCAGAATGGCAGGCTTTTATGAGGTTGGATGCGGGAGG ATTCGGTCTTTCTGGCAAGAAGGATCTTTCTGGAACTGCTCAGGCAGGACTTGCTTATACAGTGGGCAATTCAGCGCAAT TAACTCTTTCTTGGAAGTACTTTGGCCTTGAGTACGCTGGTTATGATTCTGATAATAGCTATAGTAATTATCAGAATGGT GCCAACCTTGGCTTGAGATGGTTTTTCCCTTAA
Upstream 100 bases:
>100_bases ACTTCAAGGTGAATTTACGATCCGTACTCAGGTTCAGTTCCTATTCCCAACTGGTAGCTAAAAGTATTCTTTTTATTATT CTCCCCACTAATACAAAAAC
Downstream 100 bases:
>100_bases TGGTCTTTAGCGGGTCCTATTCGGCTGATAGAGATCTGATCTCTATCAGCCGTTTGTTTCGATATCTCTTGATGTATAGA GATTGAAACTAGTGGGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MMPSRRLIALIAISTFSMLSSEAFAEQSLYERNPEQGQVLVSIEPDQLEDDEVVEENEDVLEEDDWRVYLDLYGFLPLST TGDITINGNTAPIDSSLADVLATVTGLFTGRASVEYGRLGFMAGIIYGTSSEDQSGTNSFDGEELNPPIDGLKLNSKSTT DFNQSVVDLALRYRLGAIEQPVMKTGDSTFIGFVGARVIDAGMDMDMSLSADVKVNGRTLTKKEIPELEKSASGSIDRTW AQPLLGMQVTYAMSPEWQAFMRLDAGGFGLSGKKDLSGTAQAGLAYTVGNSAQLTLSWKYFGLEYAGYDSDNSYSNYQNG ANLGLRWFFP
Sequences:
>Translated_330_residues MMPSRRLIALIAISTFSMLSSEAFAEQSLYERNPEQGQVLVSIEPDQLEDDEVVEENEDVLEEDDWRVYLDLYGFLPLST TGDITINGNTAPIDSSLADVLATVTGLFTGRASVEYGRLGFMAGIIYGTSSEDQSGTNSFDGEELNPPIDGLKLNSKSTT DFNQSVVDLALRYRLGAIEQPVMKTGDSTFIGFVGARVIDAGMDMDMSLSADVKVNGRTLTKKEIPELEKSASGSIDRTW AQPLLGMQVTYAMSPEWQAFMRLDAGGFGLSGKKDLSGTAQAGLAYTVGNSAQLTLSWKYFGLEYAGYDSDNSYSNYQNG ANLGLRWFFP >Mature_330_residues MMPSRRLIALIAISTFSMLSSEAFAEQSLYERNPEQGQVLVSIEPDQLEDDEVVEENEDVLEEDDWRVYLDLYGFLPLST TGDITINGNTAPIDSSLADVLATVTGLFTGRASVEYGRLGFMAGIIYGTSSEDQSGTNSFDGEELNPPIDGLKLNSKSTT DFNQSVVDLALRYRLGAIEQPVMKTGDSTFIGFVGARVIDAGMDMDMSLSADVKVNGRTLTKKEIPELEKSASGSIDRTW AQPLLGMQVTYAMSPEWQAFMRLDAGGFGLSGKKDLSGTAQAGLAYTVGNSAQLTLSWKYFGLEYAGYDSDNSYSNYQNG ANLGLRWFFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35987; Mature: 35987
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPSRRLIALIAISTFSMLSSEAFAEQSLYERNPEQGQVLVSIEPDQLEDDEVVEENEDV CCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHCCCHH LEEDDWRVYLDLYGFLPLSTTGDITINGNTAPIDSSLADVLATVTGLFTGRASVEYGRLG CCCCCCEEEEEEEECEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE FMAGIIYGTSSEDQSGTNSFDGEELNPPIDGLKLNSKSTTDFNQSVVDLALRYRLGAIEQ EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCC PVMKTGDSTFIGFVGARVIDAGMDMDMSLSADVKVNGRTLTKKEIPELEKSASGSIDRTW HHHHCCCCEEEHHHHHHHHHCCCCCCCEEECEEEECCEEECHHHCCHHHHHCCCCCCHHH AQPLLGMQVTYAMSPEWQAFMRLDAGGFGLSGKKDLSGTAQAGLAYTVGNSAQLTLSWKY HHHHHCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEE FGLEYAGYDSDNSYSNYQNGANLGLRWFFP EEEEEECCCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MMPSRRLIALIAISTFSMLSSEAFAEQSLYERNPEQGQVLVSIEPDQLEDDEVVEENEDV CCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHCCCHH LEEDDWRVYLDLYGFLPLSTTGDITINGNTAPIDSSLADVLATVTGLFTGRASVEYGRLG CCCCCCEEEEEEEECEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE FMAGIIYGTSSEDQSGTNSFDGEELNPPIDGLKLNSKSTTDFNQSVVDLALRYRLGAIEQ EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCC PVMKTGDSTFIGFVGARVIDAGMDMDMSLSADVKVNGRTLTKKEIPELEKSASGSIDRTW HHHHCCCCEEEHHHHHHHHHCCCCCCCEEECEEEECCEEECHHHCCHHHHHCCCCCCHHH AQPLLGMQVTYAMSPEWQAFMRLDAGGFGLSGKKDLSGTAQAGLAYTVGNSAQLTLSWKY HHHHHCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEE FGLEYAGYDSDNSYSNYQNGANLGLRWFFP EEEEEECCCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA