| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022057
Identifier: 124022057
GI number: 124022057
Start: 354184
End: 355248
Strand: Direct
Name: 124022057
Synonym: P9303_03471
Alternate gene names: NA
Gene position: 354184-355248 (Clockwise)
Preceding gene: 124022056
Following gene: 124022058
Centisome position: 13.2
GC content: 43.29
Gene sequence:
>1065_bases ATGGACTTTTCATTCTTTCGCTCCTCTTTGGCGCTGATTGTTTCAGCATTCAGCATGACAGCTCTGACTTACCTTGACTC TGAGAAGAAAGCACTGGCTGGTAATAATTGTCCTAAGGCAGCAATTGTTGCCGAGCTTGCGGAGGTAGAGAAGGCGACTC CCATCACAAAAGAAAACTATGCTTTTGCGGAAACCGATATCATTCTAGCGGAATATGTGAAGAAGATAGCCAAAAATAAC TGCTCCGAAGGCATAGGAGAATTCATGCATATTAGAGATGCTATTGATATTAACGATCGTACAATCATTCGCCCGAATTT CGATACGCTGTATTCAGCAGCTGTGATTGACCTCAATAGACCGGCAGTCATTGTGATGCCTGAAACAGATAGGCTGCAAA TTTTAGCCGCGCTTGATGAGGAACATTGGAATGTTCTTCTCGCAGATCAGCCTGGACGCTACGAATTTACAAAAGAGGCA GTGGGAGCTAGATACATTTTTTTGATTGTACGCACACAGGTCAATATGAATGACCCAGATGACCTTCAGAAGGTTTCTGC TTTGCAAGATCGAATTCAAATTCAACAAACTGATAAAGGAGAATATCTTCAGACCAAAAGATGGGATCGTCGTGAGATTC TTGCATTGCGAGATGAGTACAACGAACGCTGGAGCTCTGAGGGCATAAAAAGTGAGTTGGTGTTTGGGGGGAAAGGTGAG ATCTCCCCTGAGATGAGAAATTTTGGCGTAGCCTTTGGATGGGGTGGCCTTCCTAAAAAAGGAGCTGTCTACCCTTCGCT GCAAGTGCCAGTTTCAACTGGTCCGCTGACCTTAACTCTTAAGGATGTACCAATCGCTGATAACTCATTTTGGTCAGTCA CTATATACAATCAGGAAGGCTTTTCTCGGGGAGAGCATTATAATATCAACAGCGCTTTTGCTAAAGCGAATAAAAATGGA GAGTACGTTTTAAATTTCGGGACATCATTAGGGCAAGATAACTATCTTGAGATTTATCCTGGCTGGAATGCAACACTTAG AATTTACTCTCCTCAGTCTGCGTAA
Upstream 100 bases:
>100_bases CGACTGACTCGGTCTGGATTGATCAAGATAGAGCAAGCTGCAGTCAGGTCATGTTGCGAATCATCTGACTATCAGCTAAG AAATAATCATTTAGTTATTG
Downstream 100 bases:
>100_bases TTCAATGGTGAATGGGTCGTCCCGTCTCTGAGATCTATCCAAAAGAACTAGGTGCATATTCAAACATGAAAAACATCGAT ACTTCATGGCTAACTGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MDFSFFRSSLALIVSAFSMTALTYLDSEKKALAGNNCPKAAIVAELAEVEKATPITKENYAFAETDIILAEYVKKIAKNN CSEGIGEFMHIRDAIDINDRTIIRPNFDTLYSAAVIDLNRPAVIVMPETDRLQILAALDEEHWNVLLADQPGRYEFTKEA VGARYIFLIVRTQVNMNDPDDLQKVSALQDRIQIQQTDKGEYLQTKRWDRREILALRDEYNERWSSEGIKSELVFGGKGE ISPEMRNFGVAFGWGGLPKKGAVYPSLQVPVSTGPLTLTLKDVPIADNSFWSVTIYNQEGFSRGEHYNINSAFAKANKNG EYVLNFGTSLGQDNYLEIYPGWNATLRIYSPQSA
Sequences:
>Translated_354_residues MDFSFFRSSLALIVSAFSMTALTYLDSEKKALAGNNCPKAAIVAELAEVEKATPITKENYAFAETDIILAEYVKKIAKNN CSEGIGEFMHIRDAIDINDRTIIRPNFDTLYSAAVIDLNRPAVIVMPETDRLQILAALDEEHWNVLLADQPGRYEFTKEA VGARYIFLIVRTQVNMNDPDDLQKVSALQDRIQIQQTDKGEYLQTKRWDRREILALRDEYNERWSSEGIKSELVFGGKGE ISPEMRNFGVAFGWGGLPKKGAVYPSLQVPVSTGPLTLTLKDVPIADNSFWSVTIYNQEGFSRGEHYNINSAFAKANKNG EYVLNFGTSLGQDNYLEIYPGWNATLRIYSPQSA >Mature_354_residues MDFSFFRSSLALIVSAFSMTALTYLDSEKKALAGNNCPKAAIVAELAEVEKATPITKENYAFAETDIILAEYVKKIAKNN CSEGIGEFMHIRDAIDINDRTIIRPNFDTLYSAAVIDLNRPAVIVMPETDRLQILAALDEEHWNVLLADQPGRYEFTKEA VGARYIFLIVRTQVNMNDPDDLQKVSALQDRIQIQQTDKGEYLQTKRWDRREILALRDEYNERWSSEGIKSELVFGGKGE ISPEMRNFGVAFGWGGLPKKGAVYPSLQVPVSTGPLTLTLKDVPIADNSFWSVTIYNQEGFSRGEHYNINSAFAKANKNG EYVLNFGTSLGQDNYLEIYPGWNATLRIYSPQSA
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39765; Mature: 39765
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSFFRSSLALIVSAFSMTALTYLDSEKKALAGNNCPKAAIVAELAEVEKATPITKENY CCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC AFAETDIILAEYVKKIAKNNCSEGIGEFMHIRDAIDINDRTIIRPNFDTLYSAAVIDLNR EEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHEEEEEECCC PAVIVMPETDRLQILAALDEEHWNVLLADQPGRYEFTKEAVGARYIFLIVRTQVNMNDPD CEEEEECCCCCEEEEEEECCCCCEEEEECCCCCEEHHHHHCCCEEEEEEEEEECCCCCHH DLQKVSALQDRIQIQQTDKGEYLQTKRWDRREILALRDEYNERWSSEGIKSELVFGGKGE HHHHHHHHHHHHEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC ISPEMRNFGVAFGWGGLPKKGAVYPSLQVPVSTGPLTLTLKDVPIADNSFWSVTIYNQEG CCHHHHHCCEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCC FSRGEHYNINSAFAKANKNGEYVLNFGTSLGQDNYLEIYPGWNATLRIYSPQSA CCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEECCCCC >Mature Secondary Structure MDFSFFRSSLALIVSAFSMTALTYLDSEKKALAGNNCPKAAIVAELAEVEKATPITKENY CCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC AFAETDIILAEYVKKIAKNNCSEGIGEFMHIRDAIDINDRTIIRPNFDTLYSAAVIDLNR EEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHEEEEEECCC PAVIVMPETDRLQILAALDEEHWNVLLADQPGRYEFTKEAVGARYIFLIVRTQVNMNDPD CEEEEECCCCCEEEEEEECCCCCEEEEECCCCCEEHHHHHCCCEEEEEEEEEECCCCCHH DLQKVSALQDRIQIQQTDKGEYLQTKRWDRREILALRDEYNERWSSEGIKSELVFGGKGE HHHHHHHHHHHHEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC ISPEMRNFGVAFGWGGLPKKGAVYPSLQVPVSTGPLTLTLKDVPIADNSFWSVTIYNQEG CCHHHHHCCEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCC FSRGEHYNINSAFAKANKNGEYVLNFGTSLGQDNYLEIYPGWNATLRIYSPQSA CCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA