Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124022052

Identifier: 124022052

GI number: 124022052

Start: 350160

End: 351416

Strand: Direct

Name: 124022052

Synonym: P9303_03421

Alternate gene names: NA

Gene position: 350160-351416 (Clockwise)

Preceding gene: 124022050

Following gene: 124022053

Centisome position: 13.05

GC content: 57.28

Gene sequence:

>1257_bases
ATGATGCGCAGCATGTTGAAAGCCCTCTCGCTCACCGTTGCTGTGGGAACAGCCCTGCTCATGAGTGGAGGCCCCAGCCA
CAGCCAAACATCACCTGAGCTCACCAAAAAGGTGCTGCAGATGGAGCGCGATCGAGAACAAGAATTTGAAAACTACTTCG
GTGAAGACCTGGCATCCGTCAGCAAAACGGCTGATGAAACTGCCGCCGAACTCGAACGGCTGAGTGCAGAAACCGGAACA
CGCTCAGCGCTGCTGTATGTGATTCCGCGGAAAAGCCACCTGCACCTGGTGCTGATTCCGCCCAGTGGCACTCCGATCGT
CAAAGACTTCTATGAAGTCACCGACCCCGAGCTGTTCGCGGTCTCGCGCCGCTTTCACAAGGGCATCCTGCGGATGGATA
CAACCCAAAGTCAAAGCGCAGGCCAGCAGTTGTACGACTGGATCATCAAGCCGTATGAGCAGGAGCTGGCGGATGCAGAG
ATTGACCTACTTCTGTTCTGCCTGGGTGATGGCGTGAAGGATCTGGCTTTGCCAGCCCTGTTCAACAACGGCTCCTACCT
GATCGAGAGCTATGCGATGGCGCGGATCCCCGCGTTCAACCTGATCGAGACGACCTACAAACCCTTTAAAAGCGGTCAGC
TGTTGGCCATGGGAGCCAGCCAGTTTCAAGATCCATCGATTCCAACCTTGCCAGGCACAGCACAAGAAATCGCAGCCCTC
AGCCAAAGCCTTGGGTCTGCAGGGCAAAGCACATGGGGGGTAACACGGTTGGAGAACAGGGCCTTCACGCAGAAGCGGAT
CAACCAGAACCTCTCCAAGAAGCCTTACACCACGCTGCACGTGAGCACCCATGCCCAGTTTCAGCCTGGCCAGGTGGAGG
AGTCCTACATCCAACTCTGGGATCAGAAGCTGAAGCTGAACGCTCTCAATGCAATCGACTGGGACCAGTCCAAGGCAGAT
CTGATCGTGCTCAGCGCCTGTCAGACCGCTCTGGGAGACACCGATGCCGCCAATGGATTTGCCGGACTCGCGCTCAAAGC
CGGGGTGCCCTCAGCCATCGGCACCCTTTGGTCGGTCAACGATCAATCGACCACGGAGTTGATGACATCGTTCTACGGCG
CACTGCCGGACAGCCGCACCAAAGCTCAGGCCCTGCAAACGGCACAGATCACTGCGATCCGACAACCATCGTCGTCAACG
TCGAGCGCTGCTCCCTACTACTGGGCTGGCTTCAGCCTGATCAGCACACCTTGGTGA

Upstream 100 bases:

>100_bases
GTGCTGAATCCCTTACGAGGAAATCGTCCCGTAACCAAAACCTTACAAAAGTGGGCCATCCCAGCAATCGGAGCTAACTG
GGTAGCAAGACCAACCCCTG

Downstream 100 bases:

>100_bases
TCAGACTGAAGCCGAGTTAAAGCTCAGCTTTCGACGCGCCACTCCTGGTCGGATGGAGACCAGTCGTTCAGCTCGGATGC
TTTAAACCAGAGGCCGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Haemagglutination Activity Domain Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Hemagglutinin Family Outer Membrane Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Domain-Containing Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Region; Tetratricopeptide Domain Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Peptidase Domain-Containing Protein; Hemagglutination Activity Domain-Containing Protein

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MMRSMLKALSLTVAVGTALLMSGGPSHSQTSPELTKKVLQMERDREQEFENYFGEDLASVSKTADETAAELERLSAETGT
RSALLYVIPRKSHLHLVLIPPSGTPIVKDFYEVTDPELFAVSRRFHKGILRMDTTQSQSAGQQLYDWIIKPYEQELADAE
IDLLLFCLGDGVKDLALPALFNNGSYLIESYAMARIPAFNLIETTYKPFKSGQLLAMGASQFQDPSIPTLPGTAQEIAAL
SQSLGSAGQSTWGVTRLENRAFTQKRINQNLSKKPYTTLHVSTHAQFQPGQVEESYIQLWDQKLKLNALNAIDWDQSKAD
LIVLSACQTALGDTDAANGFAGLALKAGVPSAIGTLWSVNDQSTTELMTSFYGALPDSRTKAQALQTAQITAIRQPSSST
SSAAPYYWAGFSLISTPW

Sequences:

>Translated_418_residues
MMRSMLKALSLTVAVGTALLMSGGPSHSQTSPELTKKVLQMERDREQEFENYFGEDLASVSKTADETAAELERLSAETGT
RSALLYVIPRKSHLHLVLIPPSGTPIVKDFYEVTDPELFAVSRRFHKGILRMDTTQSQSAGQQLYDWIIKPYEQELADAE
IDLLLFCLGDGVKDLALPALFNNGSYLIESYAMARIPAFNLIETTYKPFKSGQLLAMGASQFQDPSIPTLPGTAQEIAAL
SQSLGSAGQSTWGVTRLENRAFTQKRINQNLSKKPYTTLHVSTHAQFQPGQVEESYIQLWDQKLKLNALNAIDWDQSKAD
LIVLSACQTALGDTDAANGFAGLALKAGVPSAIGTLWSVNDQSTTELMTSFYGALPDSRTKAQALQTAQITAIRQPSSST
SSAAPYYWAGFSLISTPW
>Mature_418_residues
MMRSMLKALSLTVAVGTALLMSGGPSHSQTSPELTKKVLQMERDREQEFENYFGEDLASVSKTADETAAELERLSAETGT
RSALLYVIPRKSHLHLVLIPPSGTPIVKDFYEVTDPELFAVSRRFHKGILRMDTTQSQSAGQQLYDWIIKPYEQELADAE
IDLLLFCLGDGVKDLALPALFNNGSYLIESYAMARIPAFNLIETTYKPFKSGQLLAMGASQFQDPSIPTLPGTAQEIAAL
SQSLGSAGQSTWGVTRLENRAFTQKRINQNLSKKPYTTLHVSTHAQFQPGQVEESYIQLWDQKLKLNALNAIDWDQSKAD
LIVLSACQTALGDTDAANGFAGLALKAGVPSAIGTLWSVNDQSTTELMTSFYGALPDSRTKAQALQTAQITAIRQPSSST
SSAAPYYWAGFSLISTPW

Specific function: Unknown

COG id: COG4995

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45702; Mature: 45702

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRSMLKALSLTVAVGTALLMSGGPSHSQTSPELTKKVLQMERDREQEFENYFGEDLASV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKTADETAAELERLSAETGTRSALLYVIPRKSHLHLVLIPPSGTPIVKDFYEVTDPELFA
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCHHHH
VSRRFHKGILRMDTTQSQSAGQQLYDWIIKPYEQELADAEIDLLLFCLGDGVKDLALPAL
HHHHHHHCHHHCCCCCCHHHHHHHHHHHHCHHHHHHCCCHHHEEEEECCCCHHHHHHHHH
FNNGSYLIESYAMARIPAFNLIETTYKPFKSGQLLAMGASQFQDPSIPTLPGTAQEIAAL
CCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCHHCCCCCCCCCCCCHHHHHHH
SQSLGSAGQSTWGVTRLENRAFTQKRINQNLSKKPYTTLHVSTHAQFQPGQVEESYIQLW
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
DQKLKLNALNAIDWDQSKADLIVLSACQTALGDTDAANGFAGLALKAGVPSAIGTLWSVN
HHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCEEEECCCCHHHHHEECCC
DQSTTELMTSFYGALPDSRTKAQALQTAQITAIRQPSSSTSSAAPYYWAGFSLISTPW
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCHHHCCCC
>Mature Secondary Structure
MMRSMLKALSLTVAVGTALLMSGGPSHSQTSPELTKKVLQMERDREQEFENYFGEDLASV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKTADETAAELERLSAETGTRSALLYVIPRKSHLHLVLIPPSGTPIVKDFYEVTDPELFA
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCHHHH
VSRRFHKGILRMDTTQSQSAGQQLYDWIIKPYEQELADAEIDLLLFCLGDGVKDLALPAL
HHHHHHHCHHHCCCCCCHHHHHHHHHHHHCHHHHHHCCCHHHEEEEECCCCHHHHHHHHH
FNNGSYLIESYAMARIPAFNLIETTYKPFKSGQLLAMGASQFQDPSIPTLPGTAQEIAAL
CCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCHHCCCCCCCCCCCCHHHHHHH
SQSLGSAGQSTWGVTRLENRAFTQKRINQNLSKKPYTTLHVSTHAQFQPGQVEESYIQLW
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
DQKLKLNALNAIDWDQSKADLIVLSACQTALGDTDAANGFAGLALKAGVPSAIGTLWSVN
HHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCEEEECCCCHHHHHEECCC
DQSTTELMTSFYGALPDSRTKAQALQTAQITAIRQPSSSTSSAAPYYWAGFSLISTPW
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA