| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is dap2 [H]
Identifier: 124022017
GI number: 124022017
Start: 321324
End: 323282
Strand: Reverse
Name: dap2 [H]
Synonym: P9303_03061
Alternate gene names: 124022017
Gene position: 323282-321324 (Counterclockwise)
Preceding gene: 124022018
Following gene: 124022011
Centisome position: 12.05
GC content: 55.64
Gene sequence:
>1959_bases ATGGAAAGCACCAGCCATCACCAGCGAAACCCGAAGCAAACCACTCAACCTCTTTCTGCCAGACGCGCTCTCGGACAAAC ACCCACCCTCAAAGAACCGCGCCTGATTGATGACTGGGTGCTTTGGCTGGAGCAACGTCCTCAGGAACATGGTCGCACCA CTGCCCTTATCCGTCCCTGGGGTCAATCTGACCACCCCCCCCAAGAGCTGACACCTGCCCCAGCCAACCTGCGTAGTCGT ATTCACGATTACGGAGGAGGGGTTCTAGCAACAGCCTGCCAAGACAACCAGCTACTGATGGCCTGGATCGATGATGCCGA TGGCTGCCTCTGGTTCCAGCGCTGGCAGGGCCTCAACCAGGCCACAAAAGGTAAGAAGGCATTATCTCCGCTCAAGCCGC CGCTTCGCCTCTCAAAACCAAACGATGCCCAACTTGCTGATGGTCTGATTGACCTCCCACGACAGCGCTGGCTCGGAATC ATGGAAGCAGACAAGCGGGACTGGCTGGTGACCTTCTCCCTCAACCATGAGAACCAGGCTGCCACGGTGTTGCATCGCCC TGCTGATTTTGCTGGTTACGCGATCCTCAGCCCGAATGGAGATCAACTGGCCTGGGTGGAATGGCAACAACCGGCCATGC CCTGGGAGGCAAGCCAACTCTGGTGGGCCAGCCTCGACCCTGCGGGTTTGATCCAAAGCTCGGCCTGTCTAGCTGGTAGC AAACCACTTGATCACAAACAAACGTCCGTTTTCCAGCCCCTTTGGCTACCCAATGGAGAGCTGGTTGTCAGCGAAGACAG CAGCGGCTGGTGGAATCTGATGGTGGCAAAGCTGACGACTGACCCCACTGTCCAACCCACTTGGCGACGCCCCTGGCCAC TTTCAGCCGAAACCGGCATGCCGCAGTGGGTTTATGGCATGAGCAGCAGCGCATGGGATGGAGAACAAATTCTGACCGCC GTCTGTGAACAAGGTTCTTGGAGGCTGAGCCGCTTGGCCGATGATGGACAGATCAGCACCATCAACCAACCTTTTGATGA TCTAAATGGTCTGCAGGCACAGGAAGGTCGAGCCGTAGCCATCGCTAGCAATGCCACCACGAGCCCTGGGCTACTAGAGC TCAACCTCAACTGTGGCAGCTGGAAGCACACCCCAGCCAATGAGCCTTTACTGAATGCTGATGCAATCAGCGTTGCGGAA CCTATCTGGTTTGAAGGCTGCCATGGCCAGGCAACCCATGCCTGGTATTACCCGCCAATCAATGGCAGCAAAGGCCCTGC GCCACTACTTGTCAAAAGCCATAGCGGTCCTACCAGCATGGCCAACCACGGTCTAAGCCTCAGCATTCAGTTCTGGACAT GCAGAGGCTGGGGAGTGGTGGATGTGAACTATGGCGGCTCCACTGGATTTGGCCGTGCATACCGCGAACGCCTACGGGGA GGCTGGGGTGAGACAGACGTAACGGATTGCGCACAAGCAGCACTTGCACTAGTGAAATGCAACAAGGCAAACCCAACACA AATCGCCATTGAAGGAGGCAGTGCCGGTGGATTTACCACCCTGGCCTGCCTTTGTTTCACAGATGTCTTTCGCGCTGCTG CCTGCCGTTATGCAGTGAGTGATCTCACCGCCATGGCAGAAGACACCCATCGATTTGAAGCGCGATACCTCGATCACCTA GTAGGCCGTTGGCCCGACCAAAGACAACTTTACGAAAACCGCTCACCTCTCCTGCATGCCAACAAGATCCAATGCCCAGT GATCTTCTTTCAGGGACTTCAAGACAAAGTGGTTCCTCCAGATCAAACAGAACGGATGGCCAATGCCTTAAAAGAAAACG GCATACCAGTTGAACTACACATTTTTGAGCAGGAAGGCCACGGCTTTCGCGACAGTGCTGTCAAGATCAAAGTCTTAGAA GCAACTGAGCAATTCTTCCGCCGCCACCTAAAGCTCTAG
Upstream 100 bases:
>100_bases CCGTACGTGCCAGCTGAGCGAAGCTTCGAGCCAAAGAAAAGTCTCAGCATCAGTTGATTGAGTTTAGGCAACTCCACCGC ACATCAGACCCCAAACCGCC
Downstream 100 bases:
>100_bases CTGTGCTCTCTTAAGAAGCCGATCGTCGAAACCAATTCCTCAGCAAAACGATCGACTTCTTCTGGTGTATTGGTGAAGCT CAAGCTGGCACGAGCTGATC
Product: esterase/lipase/thioesterase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MESTSHHQRNPKQTTQPLSARRALGQTPTLKEPRLIDDWVLWLEQRPQEHGRTTALIRPWGQSDHPPQELTPAPANLRSR IHDYGGGVLATACQDNQLLMAWIDDADGCLWFQRWQGLNQATKGKKALSPLKPPLRLSKPNDAQLADGLIDLPRQRWLGI MEADKRDWLVTFSLNHENQAATVLHRPADFAGYAILSPNGDQLAWVEWQQPAMPWEASQLWWASLDPAGLIQSSACLAGS KPLDHKQTSVFQPLWLPNGELVVSEDSSGWWNLMVAKLTTDPTVQPTWRRPWPLSAETGMPQWVYGMSSSAWDGEQILTA VCEQGSWRLSRLADDGQISTINQPFDDLNGLQAQEGRAVAIASNATTSPGLLELNLNCGSWKHTPANEPLLNADAISVAE PIWFEGCHGQATHAWYYPPINGSKGPAPLLVKSHSGPTSMANHGLSLSIQFWTCRGWGVVDVNYGGSTGFGRAYRERLRG GWGETDVTDCAQAALALVKCNKANPTQIAIEGGSAGGFTTLACLCFTDVFRAAACRYAVSDLTAMAEDTHRFEARYLDHL VGRWPDQRQLYENRSPLLHANKIQCPVIFFQGLQDKVVPPDQTERMANALKENGIPVELHIFEQEGHGFRDSAVKIKVLE ATEQFFRRHLKL
Sequences:
>Translated_652_residues MESTSHHQRNPKQTTQPLSARRALGQTPTLKEPRLIDDWVLWLEQRPQEHGRTTALIRPWGQSDHPPQELTPAPANLRSR IHDYGGGVLATACQDNQLLMAWIDDADGCLWFQRWQGLNQATKGKKALSPLKPPLRLSKPNDAQLADGLIDLPRQRWLGI MEADKRDWLVTFSLNHENQAATVLHRPADFAGYAILSPNGDQLAWVEWQQPAMPWEASQLWWASLDPAGLIQSSACLAGS KPLDHKQTSVFQPLWLPNGELVVSEDSSGWWNLMVAKLTTDPTVQPTWRRPWPLSAETGMPQWVYGMSSSAWDGEQILTA VCEQGSWRLSRLADDGQISTINQPFDDLNGLQAQEGRAVAIASNATTSPGLLELNLNCGSWKHTPANEPLLNADAISVAE PIWFEGCHGQATHAWYYPPINGSKGPAPLLVKSHSGPTSMANHGLSLSIQFWTCRGWGVVDVNYGGSTGFGRAYRERLRG GWGETDVTDCAQAALALVKCNKANPTQIAIEGGSAGGFTTLACLCFTDVFRAAACRYAVSDLTAMAEDTHRFEARYLDHL VGRWPDQRQLYENRSPLLHANKIQCPVIFFQGLQDKVVPPDQTERMANALKENGIPVELHIFEQEGHGFRDSAVKIKVLE ATEQFFRRHLKL >Mature_652_residues MESTSHHQRNPKQTTQPLSARRALGQTPTLKEPRLIDDWVLWLEQRPQEHGRTTALIRPWGQSDHPPQELTPAPANLRSR IHDYGGGVLATACQDNQLLMAWIDDADGCLWFQRWQGLNQATKGKKALSPLKPPLRLSKPNDAQLADGLIDLPRQRWLGI MEADKRDWLVTFSLNHENQAATVLHRPADFAGYAILSPNGDQLAWVEWQQPAMPWEASQLWWASLDPAGLIQSSACLAGS KPLDHKQTSVFQPLWLPNGELVVSEDSSGWWNLMVAKLTTDPTVQPTWRRPWPLSAETGMPQWVYGMSSSAWDGEQILTA VCEQGSWRLSRLADDGQISTINQPFDDLNGLQAQEGRAVAIASNATTSPGLLELNLNCGSWKHTPANEPLLNADAISVAE PIWFEGCHGQATHAWYYPPINGSKGPAPLLVKSHSGPTSMANHGLSLSIQFWTCRGWGVVDVNYGGSTGFGRAYRERLRG GWGETDVTDCAQAALALVKCNKANPTQIAIEGGSAGGFTTLACLCFTDVFRAAACRYAVSDLTAMAEDTHRFEARYLDHL VGRWPDQRQLYENRSPLLHANKIQCPVIFFQGLQDKVVPPDQTERMANALKENGIPVELHIFEQEGHGFRDSAVKIKVLE ATEQFFRRHLKL
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=239, Percent_Identity=25.9414225941423, Blast_Score=81, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17552908, Length=588, Percent_Identity=29.7619047619048, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI25144540, Length=212, Percent_Identity=30.188679245283, Blast_Score=104, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25144537, Length=212, Percent_Identity=30.6603773584906, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25149159, Length=240, Percent_Identity=25.4166666666667, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI25144543, Length=102, Percent_Identity=37.2549019607843, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 72431; Mature: 72431
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTSHHQRNPKQTTQPLSARRALGQTPTLKEPRLIDDWVLWLEQRPQEHGRTTALIRPW CCCCCCCCCCCHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHCCCEEEEEECC GQSDHPPQELTPAPANLRSRIHDYGGGVLATACQDNQLLMAWIDDADGCLWFQRWQGLNQ CCCCCCCHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCEEHHHHHCCCCH ATKGKKALSPLKPPLRLSKPNDAQLADGLIDLPRQRWLGIMEADKRDWLVTFSLNHENQA HHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCEECCCCCEEEEEEECCCCCE ATVLHRPADFAGYAILSPNGDQLAWVEWQQPAMPWEASQLWWASLDPAGLIQSSACLAGS EEEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCHHHHHHCCHHHCCC KPLDHKQTSVFQPLWLPNGELVVSEDSSGWWNLMVAKLTTDPTVQPTWRRPWPLSAETGM CCCCCCHHHCCCEEECCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC PQWVYGMSSSAWDGEQILTAVCEQGSWRLSRLADDGQISTINQPFDDLNGLQAQEGRAVA CCEEECCCCCCCCHHHHHHHHHHCCCCEEHHCCCCCCEEECCCCHHHHCCCCCCCCCEEE IASNATTSPGLLELNLNCGSWKHTPANEPLLNADAISVAEPIWFEGCHGQATHAWYYPPI EECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCEEEECCCC NGSKGPAPLLVKSHSGPTSMANHGLSLSIQFWTCRGWGVVDVNYGGSTGFGRAYRERLRG CCCCCCCCEEEECCCCCHHHHCCCEEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHCC GWGETDVTDCAQAALALVKCNKANPTQIAIEGGSAGGFTTLACLCFTDVFRAAACRYAVS CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH DLTAMAEDTHRFEARYLDHLVGRWPDQRQLYENRSPLLHANKIQCPVIFFQGLQDKVVPP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEECCCCCCEEEEECCCCCCCCCC DQTERMANALKENGIPVELHIFEQEGHGFRDSAVKIKVLEATEQFFRRHLKL CHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHCC >Mature Secondary Structure MESTSHHQRNPKQTTQPLSARRALGQTPTLKEPRLIDDWVLWLEQRPQEHGRTTALIRPW CCCCCCCCCCCHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHCCCEEEEEECC GQSDHPPQELTPAPANLRSRIHDYGGGVLATACQDNQLLMAWIDDADGCLWFQRWQGLNQ CCCCCCCHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCEEHHHHHCCCCH ATKGKKALSPLKPPLRLSKPNDAQLADGLIDLPRQRWLGIMEADKRDWLVTFSLNHENQA HHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCEECCCCCEEEEEEECCCCCE ATVLHRPADFAGYAILSPNGDQLAWVEWQQPAMPWEASQLWWASLDPAGLIQSSACLAGS EEEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCHHHHHHCCHHHCCC KPLDHKQTSVFQPLWLPNGELVVSEDSSGWWNLMVAKLTTDPTVQPTWRRPWPLSAETGM CCCCCCHHHCCCEEECCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC PQWVYGMSSSAWDGEQILTAVCEQGSWRLSRLADDGQISTINQPFDDLNGLQAQEGRAVA CCEEECCCCCCCCHHHHHHHHHHCCCCEEHHCCCCCCEEECCCCHHHHCCCCCCCCCEEE IASNATTSPGLLELNLNCGSWKHTPANEPLLNADAISVAEPIWFEGCHGQATHAWYYPPI EECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCEEEECCCC NGSKGPAPLLVKSHSGPTSMANHGLSLSIQFWTCRGWGVVDVNYGGSTGFGRAYRERLRG CCCCCCCCEEEECCCCCHHHHCCCEEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHCC GWGETDVTDCAQAALALVKCNKANPTQIAIEGGSAGGFTTLACLCFTDVFRAAACRYAVS CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH DLTAMAEDTHRFEARYLDHLVGRWPDQRQLYENRSPLLHANKIQCPVIFFQGLQDKVVPP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEECCCCCCEEEEECCCCCCCCCC DQTERMANALKENGIPVELHIFEQEGHGFRDSAVKIKVLEATEQFFRRHLKL CHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]