| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021985
Identifier: 124021985
GI number: 124021985
Start: 286001
End: 286357
Strand: Reverse
Name: 124021985
Synonym: P9303_02721
Alternate gene names: NA
Gene position: 286357-286001 (Counterclockwise)
Preceding gene: 124021986
Following gene: 124021984
Centisome position: 10.67
GC content: 50.98
Gene sequence:
>357_bases ATGGCAATTAGAAGTACAAGAGCAGGTTTCACACAGGCCAAGTTCAATGACGATGCCTCATCTCTGGTCATTTTTGAAAT CATCGTGATAGCCGTTGCATTCGGCATCGGAATGCAGAGCTGGTGGTGGGGAGGAGGAATATTCCTGGGAGGAGTGATCG TGATGGTCACCCCTATTTTGAATATCCTGTTCTGCATTGCCATGACGGCGCTATGGGCCGCGGCCGGCTTCCATATCGGC GAAGCGATCGATCAGGAAGGTGCCAACTACGTAATCGCAGTAATTGCTGGCCTGATTGCACTCGGAGCGCATCTCGGTGC AATCGAATGGGCAGAAGATTTGGGAGCAAAAGATTAG
Upstream 100 bases:
>100_bases CCACAATCATGATCCATAGGGATGGTGCTTCATCAGGTAGCAGTAGAAATATACTGCCGGTACTAAGCATTAAGAATCTC CCCTTACTCCTAACTAAGCC
Downstream 100 bases:
>100_bases TTTACCTACAAATAATCTTGCAAGATCCAGATAACAACCCATTCACCGATCGCAAAGCCTTCGCCACAATCAACTCATCC AGGGCAGAATGTCCCCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MAIRSTRAGFTQAKFNDDASSLVIFEIIVIAVAFGIGMQSWWWGGGIFLGGVIVMVTPILNILFCIAMTALWAAAGFHIG EAIDQEGANYVIAVIAGLIALGAHLGAIEWAEDLGAKD
Sequences:
>Translated_118_residues MAIRSTRAGFTQAKFNDDASSLVIFEIIVIAVAFGIGMQSWWWGGGIFLGGVIVMVTPILNILFCIAMTALWAAAGFHIG EAIDQEGANYVIAVIAGLIALGAHLGAIEWAEDLGAKD >Mature_117_residues AIRSTRAGFTQAKFNDDASSLVIFEIIVIAVAFGIGMQSWWWGGGIFLGGVIVMVTPILNILFCIAMTALWAAAGFHIGE AIDQEGANYVIAVIAGLIALGAHLGAIEWAEDLGAKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12424; Mature: 12292
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRSTRAGFTQAKFNDDASSLVIFEIIVIAVAFGIGMQSWWWGGGIFLGGVIVMVTPIL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHH NILFCIAMTALWAAAGFHIGEAIDQEGANYVIAVIAGLIALGAHLGAIEWAEDLGAKD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC >Mature Secondary Structure AIRSTRAGFTQAKFNDDASSLVIFEIIVIAVAFGIGMQSWWWGGGIFLGGVIVMVTPIL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHH NILFCIAMTALWAAAGFHIGEAIDQEGANYVIAVIAGLIALGAHLGAIEWAEDLGAKD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA