Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124021976

Identifier: 124021976

GI number: 124021976

Start: 274660

End: 275085

Strand: Direct

Name: 124021976

Synonym: P9303_02631

Alternate gene names: NA

Gene position: 274660-275085 (Clockwise)

Preceding gene: 124021975

Following gene: 124021977

Centisome position: 10.24

GC content: 51.64

Gene sequence:

>426_bases
ATGCATCAGGAGCAGGCGCTAATGGTTTCTGGAACTTGGTCGAGTGGTGAAGATGTGACGTCTCGCTTGGCGGAACGGGA
GGCCACTCTCAACCTGCGCAGCGAGGCCGAAGCGTTGTTGTTGTCTTTCACCCGAGCTCAGATGACACGTTTCTATTGGG
GTGAGTTTGCCTCGTCGTTGGATGAGCTGGGCCTGACTGTTGGAGAACCTCTCATCGCACATGTGCAACGATCAAAAAAC
CTCACCATGTTGTGGCTGGCTCCTCAACATGGTGAGGAAGCCTATTTAGCCATTGTTCGTCGTGACAGCAGCGGCACTAG
GCTCGAGAGACTTCATTGCAGAGGCAATGTTTCCAGGTTGAAGCAACCCTTTTTGGGTCGTTGCCCAGATGGATGGAGTG
CATTTTTGCCTTTAAAAAACATTTGA

Upstream 100 bases:

>100_bases
GAGGGTCATTGTTGAGACGCTCATGCTCGGCATGCTGAGCTCACAGAAAGCCCCATCGCTTGTAGCCGCAGTCCTTTTGG
CAGTGATGGGTTTGTTGGGG

Downstream 100 bases:

>100_bases
ATATTGCGACATCAACTTGATTAGGCCTCTTAACTATTGGGGCACGACGAGATTCGCGATCTTTCAGCCTTGGTGCAAGA
ACAGTTTGATTACGGTCTGA

Product: thymidylate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWGEFASSLDELGLTVGEPLIAHVQRSKN
LTMLWLAPQHGEEAYLAIVRRDSSGTRLERLHCRGNVSRLKQPFLGRCPDGWSAFLPLKNI

Sequences:

>Translated_141_residues
MHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWGEFASSLDELGLTVGEPLIAHVQRSKN
LTMLWLAPQHGEEAYLAIVRRDSSGTRLERLHCRGNVSRLKQPFLGRCPDGWSAFLPLKNI
>Mature_141_residues
MHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWGEFASSLDELGLTVGEPLIAHVQRSKN
LTMLWLAPQHGEEAYLAIVRRDSSGTRLERLHCRGNVSRLKQPFLGRCPDGWSAFLPLKNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15915; Mature: 15915

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWGEFASSL
CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELGLTVGEPLIAHVQRSKNLTMLWLAPQHGEEAYLAIVRRDSSGTRLERLHCRGNVSRL
HHCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHCCCCHHHH
KQPFLGRCPDGWSAFLPLKNI
CCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWGEFASSL
CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELGLTVGEPLIAHVQRSKNLTMLWLAPQHGEEAYLAIVRRDSSGTRLERLHCRGNVSRL
HHCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHCCCCHHHH
KQPFLGRCPDGWSAFLPLKNI
CCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA