| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021933
Identifier: 124021933
GI number: 124021933
Start: 237273
End: 238064
Strand: Reverse
Name: 124021933
Synonym: P9303_02201
Alternate gene names: NA
Gene position: 238064-237273 (Counterclockwise)
Preceding gene: 124021939
Following gene: 124021932
Centisome position: 8.87
GC content: 53.91
Gene sequence:
>792_bases TTGTCCAGCGGCTTAATCAAAAAAAAACAGCCCGACAGCAGCACATTTGTACGGAACCAACCCCTGAGGAAGCCTGTCGA ATCGCAAACATCTGAAAAGGACTTCGACGCCAATCTTTCAGACCTTCAGCAATTGCAACTTTGGGCAGGTGCCCTGGTCG TGCTGCCTGTTTTTGTGCAGGCCCCCTGGGTACGCCTGAATCCATTATCAGCCTGCTTATTCACGCTGTTCCTGCTAGCT CTTGGCATTCCTCTTGCCCTCCTCGGCCAACGGGGATGGGCTGTGGCGGGCGAGCTTTTGGTAGGGGTTAGCGGCAGCTG GCTCGCGGGATGCCTCTACTGGGGATGGCTCAGAACACAGCCCTTGTGGCACTTACCCGTTGAATCTCTAGTGCTGCCTA TTGCCCTGTTGGGGCTTTCGAGCCGCTGGAGATTGAGTTCAAGTTTCTATTTGGCCTCCCTGCTTGGAACCGCCTGCACT GATCTGATGATGGTCCTGACCGGCGTCATGAATCAATGGCCTGTTGTGGTGATGGCTCCACTACAGCAAGCACCAAGGTT GCTTCACGAAACTGCTCAGCAGCTTCTTCATCCCCTTCCCCTTATCGCTCTGGTCTGTGCAGCAACGCTGATCCTGCTGC TGGCGCAAGCTATGCAGCAAAAAACCCGTCTGGCTTCAGAATTTCGCAGTACATGGGCTGTAGGCAGTGCAGTACTAGTG ACAACGCTAATAATCGATGGACTTTTCCTGATTGCAGCCCTAATCAACCCAGGGTTGAGCGGCTTGATCTGA
Upstream 100 bases:
>100_bases CCATGGAGGCTATTGACCCCATGGGTCCAATGCCAAAAGCAGCGCAATTCCAGAGAGTCTTATAAGGTTCAATGTCTTGA CTGCATAGTGAGAGGGTGCT
Downstream 100 bases:
>100_bases AACGAACTGCAAAAGCTGATCACAGTCCTGGGTTAAGTTCCTGTCCAAACTTGTAAAGTTGGTAGACCGGCATAGCCGGA AGACCTCTTCCGATCCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSSGLIKKKQPDSSTFVRNQPLRKPVESQTSEKDFDANLSDLQQLQLWAGALVVLPVFVQAPWVRLNPLSACLFTLFLLA LGIPLALLGQRGWAVAGELLVGVSGSWLAGCLYWGWLRTQPLWHLPVESLVLPIALLGLSSRWRLSSSFYLASLLGTACT DLMMVLTGVMNQWPVVVMAPLQQAPRLLHETAQQLLHPLPLIALVCAATLILLLAQAMQQKTRLASEFRSTWAVGSAVLV TTLIIDGLFLIAALINPGLSGLI
Sequences:
>Translated_263_residues MSSGLIKKKQPDSSTFVRNQPLRKPVESQTSEKDFDANLSDLQQLQLWAGALVVLPVFVQAPWVRLNPLSACLFTLFLLA LGIPLALLGQRGWAVAGELLVGVSGSWLAGCLYWGWLRTQPLWHLPVESLVLPIALLGLSSRWRLSSSFYLASLLGTACT DLMMVLTGVMNQWPVVVMAPLQQAPRLLHETAQQLLHPLPLIALVCAATLILLLAQAMQQKTRLASEFRSTWAVGSAVLV TTLIIDGLFLIAALINPGLSGLI >Mature_262_residues SSGLIKKKQPDSSTFVRNQPLRKPVESQTSEKDFDANLSDLQQLQLWAGALVVLPVFVQAPWVRLNPLSACLFTLFLLAL GIPLALLGQRGWAVAGELLVGVSGSWLAGCLYWGWLRTQPLWHLPVESLVLPIALLGLSSRWRLSSSFYLASLLGTACTD LMMVLTGVMNQWPVVVMAPLQQAPRLLHETAQQLLHPLPLIALVCAATLILLLAQAMQQKTRLASEFRSTWAVGSAVLVT TLIIDGLFLIAALINPGLSGLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28605; Mature: 28474
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGLIKKKQPDSSTFVRNQPLRKPVESQTSEKDFDANLSDLQQLQLWAGALVVLPVFVQ CCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH APWVRLNPLSACLFTLFLLALGIPLALLGQRGWAVAGELLVGVSGSWLAGCLYWGWLRTQ CCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC PLWHLPVESLVLPIALLGLSSRWRLSSSFYLASLLGTACTDLMMVLTGVMNQWPVVVMAP CCHHCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHH LQQAPRLLHETAQQLLHPLPLIALVCAATLILLLAQAMQQKTRLASEFRSTWAVGSAVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTLIIDGLFLIAALINPGLSGLI HHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure SSGLIKKKQPDSSTFVRNQPLRKPVESQTSEKDFDANLSDLQQLQLWAGALVVLPVFVQ CCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH APWVRLNPLSACLFTLFLLALGIPLALLGQRGWAVAGELLVGVSGSWLAGCLYWGWLRTQ CCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC PLWHLPVESLVLPIALLGLSSRWRLSSSFYLASLLGTACTDLMMVLTGVMNQWPVVVMAP CCHHCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHH LQQAPRLLHETAQQLLHPLPLIALVCAATLILLLAQAMQQKTRLASEFRSTWAVGSAVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTLIIDGLFLIAALINPGLSGLI HHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA