| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is scrK [H]
Identifier: 124021886
GI number: 124021886
Start: 193567
End: 194607
Strand: Direct
Name: scrK [H]
Synonym: P9303_01731
Alternate gene names: 124021886
Gene position: 193567-194607 (Clockwise)
Preceding gene: 124021885
Following gene: 124021888
Centisome position: 7.22
GC content: 57.16
Gene sequence:
>1041_bases ATGACGGGGACCAATCCGGTTCACAGCAACGAGCCTGAGGTGATTTGCTTGGGCGAGGCGTTGGTGGATCGTCTTGGACC TCTGGGGGGAGATCCAGTTGTGGATCAGCCTGTGGAAGATTGCCTAGGGGGAGCCCCTGCCAACGTGGCTTGTGGCTTAG CTCGGCTTGGTAGCAAGGTGGCTTTTTTAGGACGTCTTGGAGACGATTCCATCGGGGCCAGGTTTCGAGAATTGTTTGAT ACTCGAGGCGTGAACCTTGCTGGTCTGCAGACCGATCTGCGTCGGCCAAGTCGCATTGTGTTGGTGCGTCGTGATCTCGA TGGGGAGAGGGTTTTCCAGGGTTTTGCAGGCGACCGCGGAGACGGTTTTGCTGATCAGGCTCTGTCTTTAGATGAGTTGG CGGCCAGCTGGCCTTTGCTGGTAGGTAAGGCGAGCTGGTTGTTGATCGGCTCCATTCCTTTGGCCACACCAGCTTCCGCC CAAGCCTTGCTTTGGTGCGTTGAGCAGGCACAAACAGCAGGGATTGAGATAGCCCTGGATGTCAACTGGCGTTCAACCTT CTGGGATCCTGGCCGTTCTCCCGATAGTGGCCCTGATGAGAAGGCCTTGCAGGCGATTGCGCCGCTTCTTGAGCGTGCTT CTCTGCTCAAACTGGCTAGGGAAGAGGCCGTTTGGTTCTTTGACACTGACGACCCTGCAGTGATTGCGCGATCCCTTCCG CAGCAGCCGGATGTGGTTGTGACCGATGGGGCGCGTCCGGTGCGGTGGTGGATAGGGGGTTGTGTTGGTGAGCTTGCAGC GCTTTCTCCCCCTTCAGTTGTCGACACCACGGGTGCTGGCGATGCTTTCACTGCAGGATTGCTGCATCAATTGTTGATGG ATGTCTCATCTCAACGAGATTCGATCAAGGTCCGGGAGATGGTTCGTTTTGCTGCAGCCTGTGGTGCGCTTGTTTGTGGA GGGGCTGGTGGTATCGATCCGCAGCCGTCTCAGATGCAAGTGGAGGAGTTTTTGGGGTCGGTCGCAGGTGACGTGAACTG A
Upstream 100 bases:
>100_bases CCCGGCAGCCAATGCGCGCATGATTGCCGCGTTGATTGATCATCTTCGCGCAGACACGCTTGGCCAGCGTTCCTAGCTTC AACTCAGTAGCTGCTAACTG
Downstream 100 bases:
>100_bases GCCAGACGACCTCCTTGAGCTCGATGCTGCAATTGCAATCTCCAGGCTTCAGGCAAGTTCAGGCTTAATCGATCAGGCCA TTCCACGGCCATGAGGGCAC
Product: carbohydrate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTGTNPVHSNEPEVICLGEALVDRLGPLGGDPVVDQPVEDCLGGAPANVACGLARLGSKVAFLGRLGDDSIGARFRELFD TRGVNLAGLQTDLRRPSRIVLVRRDLDGERVFQGFAGDRGDGFADQALSLDELAASWPLLVGKASWLLIGSIPLATPASA QALLWCVEQAQTAGIEIALDVNWRSTFWDPGRSPDSGPDEKALQAIAPLLERASLLKLAREEAVWFFDTDDPAVIARSLP QQPDVVVTDGARPVRWWIGGCVGELAALSPPSVVDTTGAGDAFTAGLLHQLLMDVSSQRDSIKVREMVRFAAACGALVCG GAGGIDPQPSQMQVEEFLGSVAGDVN
Sequences:
>Translated_346_residues MTGTNPVHSNEPEVICLGEALVDRLGPLGGDPVVDQPVEDCLGGAPANVACGLARLGSKVAFLGRLGDDSIGARFRELFD TRGVNLAGLQTDLRRPSRIVLVRRDLDGERVFQGFAGDRGDGFADQALSLDELAASWPLLVGKASWLLIGSIPLATPASA QALLWCVEQAQTAGIEIALDVNWRSTFWDPGRSPDSGPDEKALQAIAPLLERASLLKLAREEAVWFFDTDDPAVIARSLP QQPDVVVTDGARPVRWWIGGCVGELAALSPPSVVDTTGAGDAFTAGLLHQLLMDVSSQRDSIKVREMVRFAAACGALVCG GAGGIDPQPSQMQVEEFLGSVAGDVN >Mature_345_residues TGTNPVHSNEPEVICLGEALVDRLGPLGGDPVVDQPVEDCLGGAPANVACGLARLGSKVAFLGRLGDDSIGARFRELFDT RGVNLAGLQTDLRRPSRIVLVRRDLDGERVFQGFAGDRGDGFADQALSLDELAASWPLLVGKASWLLIGSIPLATPASAQ ALLWCVEQAQTAGIEIALDVNWRSTFWDPGRSPDSGPDEKALQAIAPLLERASLLKLAREEAVWFFDTDDPAVIARSLPQ QPDVVVTDGARPVRWWIGGCVGELAALSPPSVVDTTGAGDAFTAGLLHQLLMDVSSQRDSIKVREMVRFAAACGALVCGG AGGIDPQPSQMQVEEFLGSVAGDVN
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 36499; Mature: 36368
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTNPVHSNEPEVICLGEALVDRLGPLGGDPVVDQPVEDCLGGAPANVACGLARLGSKV CCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCHH AFLGRLGDDSIGARFRELFDTRGVNLAGLQTDLRRPSRIVLVRRDLDGERVFQGFAGDRG EEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHCCCCEEEEEEECCCHHHHHHHCCCCCC DGFADQALSLDELAASWPLLVGKASWLLIGSIPLATPASAQALLWCVEQAQTAGIEIALD CCHHHHHCCHHHHHHCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEE VNWRSTFWDPGRSPDSGPDEKALQAIAPLLERASLLKLAREEAVWFFDTDDPAVIARSLP ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHCC QQPDVVVTDGARPVRWWIGGCVGELAALSPPSVVDTTGAGDAFTAGLLHQLLMDVSSQRD CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCC SIKVREMVRFAAACGALVCGGAGGIDPQPSQMQVEEFLGSVAGDVN HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TGTNPVHSNEPEVICLGEALVDRLGPLGGDPVVDQPVEDCLGGAPANVACGLARLGSKV CCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCHH AFLGRLGDDSIGARFRELFDTRGVNLAGLQTDLRRPSRIVLVRRDLDGERVFQGFAGDRG EEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHCCCCEEEEEEECCCHHHHHHHCCCCCC DGFADQALSLDELAASWPLLVGKASWLLIGSIPLATPASAQALLWCVEQAQTAGIEIALD CCHHHHHCCHHHHHHCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEE VNWRSTFWDPGRSPDSGPDEKALQAIAPLLERASLLKLAREEAVWFFDTDDPAVIARSLP ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHCC QQPDVVVTDGARPVRWWIGGCVGELAALSPPSVVDTTGAGDAFTAGLLHQLLMDVSSQRD CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCC SIKVREMVRFAAACGALVCGGAGGIDPQPSQMQVEEFLGSVAGDVN HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2174811 [H]