| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021874
Identifier: 124021874
GI number: 124021874
Start: 178035
End: 179453
Strand: Direct
Name: 124021874
Synonym: P9303_01611
Alternate gene names: NA
Gene position: 178035-179453 (Clockwise)
Preceding gene: 124021873
Following gene: 124021876
Centisome position: 6.64
GC content: 44.82
Gene sequence:
>1419_bases TTGGCAAGTCTTGGTTGTCTTCAACTTCTGGACTCTTCATTAAATAGATTCGCCGAAATTCGTCTGCCTCTTAAGGAGAT AGATTTCTCGATTGTAGGGATGATTCATACCCTTAGTTCTAGTGAGGCTATAGAAACGGTTGCTAATTGTGTGGCGAGAG ATCTTTATCCTTGGGATGCCATTGTTTGTACCTCTAACGCTGGGAAGGAGGTTGTCCAAAAGATTTGGGAACAGCGCGCA GCTTATCTTTGTTGCCGTTTAGGTGCTAATTTTGCAAGTGATAATTGGATGCCTGCAACTCCCGTCATTCCTCTCCCAGG GCCTGCTAAGCAGCCTTATCGGCCAGATTTGAGTCGCAAGGAGCGAAGGCAATTGGCGCGAAAAGTGCTAGGAATTTCAG ATGAGGCGTTTGTTATTTGCTTTGTTGGCCGCCTTAGCTTTCATAGCAAGGCTCATCCCGTTATTTTATATCAAACCTTG GCCAATTTATCCCAAGACACTAGAGAAGTTGTATTGATTGAGTGCGGTCAATTCCCTAATTACCATTTCAGGGAAGCATT TGATGAGGTGGCTGGAATGTTTCAAGGCTTCACTAGAATCGTTATCGGTGGATTGTCGCCTGCCACTGAGAATGAGAAGT GGGAAGTTTATGCAGCCGCCAATGTCTTCCTGTCACACTCTGACAATATTCAGGAAACATTTGGTCTTACAATTCTTGAG GCAATGCTTGCTGAATTGCCAGTGATTGCTTCTGCATGGAGTGGTTATCGAGATCTTGTTGCAGATGGTCAAACGGGTTT CCTTTTGCCTACAATAGATTTGCTATTGGACCTTGAAGATGATCCTTTGCAGGATGCTTACTATGAGCGCGAGCTCAGTT ATGATATATGGGTGGGTATCGCAAGCTTGGGCGTATTGATTGACAAGGATGCTCTCTATGCGTCCTTAAGGACCTTTGTT GAATGCCCTGAATTAGGGGAAAGGTTTGCTGCTGAGGGCCTTCGTCGCTTTCATAAACTATTCTCTCCTTTTGCAGTATT ACAGAGATATCGTGACCTTTGGCTAGACTTGGCGGCCAAGCGTAACCAGGCCAAAAAAGATGGTGGGTATCCTTCTGGGA AGGCTCCCAAAATGGGCGAACTATTCTCAGGATATCCAAGCACTGTTCAACATTTAGAGGCAATTTCAATAAAAAAGACG ACTTATTTCTGGGCTTTGTTAAAGGGCCCTATGGTGAATGAGTTTCTGCAGAAAATCAGTTCTGATTCTGGGGATACTTT TCTGGAGTTTATCAACGATAGGAAAGTGGTCTCGGTTGTTGATTTACTTGCGCTTGGCTATCGGCGTGATCAAGCCCTTC GTTTGCTGACTTTGCTTGTAAAATTGGGTCTTGCAGAATCCCATGCAGTGGGTGGGTAG
Upstream 100 bases:
>100_bases TTCAAAGGATGAAGATCAAAAGGCTCTAAGAGAGATGCTTGTGCCCTTGATGCAAGCTAATACTAAATTGCGAATACATC AAGGGTGGGACCATCGTTGC
Downstream 100 bases:
>100_bases ACGCATTGGTAATTAGGTGTTCAACGCTTGCTCGATCGCACCTTTCAGTTCAGTGCTTTCAGGCTCCACGCCGCTCTTGA AACGTTTGATCACGGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family; Group 1 Glycosyl Transferase; Glycosyltransferase
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MASLGCLQLLDSSLNRFAEIRLPLKEIDFSIVGMIHTLSSSEAIETVANCVARDLYPWDAIVCTSNAGKEVVQKIWEQRA AYLCCRLGANFASDNWMPATPVIPLPGPAKQPYRPDLSRKERRQLARKVLGISDEAFVICFVGRLSFHSKAHPVILYQTL ANLSQDTREVVLIECGQFPNYHFREAFDEVAGMFQGFTRIVIGGLSPATENEKWEVYAAANVFLSHSDNIQETFGLTILE AMLAELPVIASAWSGYRDLVADGQTGFLLPTIDLLLDLEDDPLQDAYYERELSYDIWVGIASLGVLIDKDALYASLRTFV ECPELGERFAAEGLRRFHKLFSPFAVLQRYRDLWLDLAAKRNQAKKDGGYPSGKAPKMGELFSGYPSTVQHLEAISIKKT TYFWALLKGPMVNEFLQKISSDSGDTFLEFINDRKVVSVVDLLALGYRRDQALRLLTLLVKLGLAESHAVGG
Sequences:
>Translated_472_residues MASLGCLQLLDSSLNRFAEIRLPLKEIDFSIVGMIHTLSSSEAIETVANCVARDLYPWDAIVCTSNAGKEVVQKIWEQRA AYLCCRLGANFASDNWMPATPVIPLPGPAKQPYRPDLSRKERRQLARKVLGISDEAFVICFVGRLSFHSKAHPVILYQTL ANLSQDTREVVLIECGQFPNYHFREAFDEVAGMFQGFTRIVIGGLSPATENEKWEVYAAANVFLSHSDNIQETFGLTILE AMLAELPVIASAWSGYRDLVADGQTGFLLPTIDLLLDLEDDPLQDAYYERELSYDIWVGIASLGVLIDKDALYASLRTFV ECPELGERFAAEGLRRFHKLFSPFAVLQRYRDLWLDLAAKRNQAKKDGGYPSGKAPKMGELFSGYPSTVQHLEAISIKKT TYFWALLKGPMVNEFLQKISSDSGDTFLEFINDRKVVSVVDLLALGYRRDQALRLLTLLVKLGLAESHAVGG >Mature_471_residues ASLGCLQLLDSSLNRFAEIRLPLKEIDFSIVGMIHTLSSSEAIETVANCVARDLYPWDAIVCTSNAGKEVVQKIWEQRAA YLCCRLGANFASDNWMPATPVIPLPGPAKQPYRPDLSRKERRQLARKVLGISDEAFVICFVGRLSFHSKAHPVILYQTLA NLSQDTREVVLIECGQFPNYHFREAFDEVAGMFQGFTRIVIGGLSPATENEKWEVYAAANVFLSHSDNIQETFGLTILEA MLAELPVIASAWSGYRDLVADGQTGFLLPTIDLLLDLEDDPLQDAYYERELSYDIWVGIASLGVLIDKDALYASLRTFVE CPELGERFAAEGLRRFHKLFSPFAVLQRYRDLWLDLAAKRNQAKKDGGYPSGKAPKMGELFSGYPSTVQHLEAISIKKTT YFWALLKGPMVNEFLQKISSDSGDTFLEFINDRKVVSVVDLLALGYRRDQALRLLTLLVKLGLAESHAVGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52689; Mature: 52558
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLGCLQLLDSSLNRFAEIRLPLKEIDFSIVGMIHTLSSSEAIETVANCVARDLYPWDA CCCHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCE IVCTSNAGKEVVQKIWEQRAAYLCCRLGANFASDNWMPATPVIPLPGPAKQPYRPDLSRK EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHH ERRQLARKVLGISDEAFVICFVGRLSFHSKAHPVILYQTLANLSQDTREVVLIECGQFPN HHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCC YHFREAFDEVAGMFQGFTRIVIGGLSPATENEKWEVYAAANVFLSHSDNIQETFGLTILE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHH AMLAELPVIASAWSGYRDLVADGQTGFLLPTIDLLLDLEDDPLQDAYYERELSYDIWVGI HHHHHCCHHHHHHCCHHHHHCCCCCCCCHHHHHHHEECCCCCCHHHHHHHHCCHHHHHHH ASLGVLIDKDALYASLRTFVECPELGERFAAEGLRRFHKLFSPFAVLQRYRDLWLDLAAK HHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNQAKKDGGYPSGKAPKMGELFSGYPSTVQHLEAISIKKTTYFWALLKGPMVNEFLQKIS HCCHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC SDSGDTFLEFINDRKVVSVVDLLALGYRRDQALRLLTLLVKLGLAESHAVGG CCCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ASLGCLQLLDSSLNRFAEIRLPLKEIDFSIVGMIHTLSSSEAIETVANCVARDLYPWDA CCHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCE IVCTSNAGKEVVQKIWEQRAAYLCCRLGANFASDNWMPATPVIPLPGPAKQPYRPDLSRK EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHH ERRQLARKVLGISDEAFVICFVGRLSFHSKAHPVILYQTLANLSQDTREVVLIECGQFPN HHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCC YHFREAFDEVAGMFQGFTRIVIGGLSPATENEKWEVYAAANVFLSHSDNIQETFGLTILE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHH AMLAELPVIASAWSGYRDLVADGQTGFLLPTIDLLLDLEDDPLQDAYYERELSYDIWVGI HHHHHCCHHHHHHCCHHHHHCCCCCCCCHHHHHHHEECCCCCCHHHHHHHHCCHHHHHHH ASLGVLIDKDALYASLRTFVECPELGERFAAEGLRRFHKLFSPFAVLQRYRDLWLDLAAK HHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNQAKKDGGYPSGKAPKMGELFSGYPSTVQHLEAISIKKTTYFWALLKGPMVNEFLQKIS HCCHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC SDSGDTFLEFINDRKVVSVVDLLALGYRRDQALRLLTLLVKLGLAESHAVGG CCCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA