| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021861
Identifier: 124021861
GI number: 124021861
Start: 164971
End: 166005
Strand: Direct
Name: 124021861
Synonym: P9303_01481
Alternate gene names: NA
Gene position: 164971-166005 (Clockwise)
Preceding gene: 124021860
Following gene: 124021863
Centisome position: 6.15
GC content: 44.15
Gene sequence:
>1035_bases TTGCAGTCAGCATGTTGGCGAAAAAAGCATAATCGTAAAATGAGTTTGCTAAGTAAGCCCCTGACGATTTGGATTCCTAC CTTTCGTAGACCAAGACAGCTCTCTCGACTTTTAAACAATTTTGATCAGCTTGGGATCATTGATTTTGCTGATGTTTTAA TTTCTGATAATGACCCTGAAGGACCCTTGGCATCAGCCATAGCGAACGGAGATGGTGATTTGCCACTACATGTTCGTTAT CGATGTAACTCGGCCAATTTATCTGCGGGTGTGAATTTTCTTCGGGCTTTTGAATGTTGTACAACCCCTTGGTTAATGAT CGTCGGTGATGACGACTGGTTTAAGTCTGGTGCGGCTGATCAAATTCAAGATCTTATTGCTTCACTTCGCGACGACATCG CTGCAGTGAAGTTTGATTCAAGCTTGTTTGGTTCTCAGCCTGTATGTGTTTCATCAGGACTTGGTGATTATGTAGAGCAG CTCTCTCCTCGTAACTATCCTGATGCTTTCAACAATCTCTGCTTAATATCAAACTGGTTGTTCCGTACTGACTCTTATAG ACCATATTTGTCTAGCGCTTATCTTGGCTATTCCAGCAAAATATCTCATTTGTTCCCGGCTTTGCAGGCTTGTGTTCGCG ATGATGCGAAGCTGATGTTTTCACATTTGCAGCCAGTCGAGCATGGTGTCTCGGACGCCTCTTGGCCCAAGGCAGCGACT TGGTTTGAGATGGTAATCACTCTTGCGAGTTTCAGTGGCTTTATTGATTCCCAAAATCGATATGCATTGTTGAAGCTGCT TTTGCATTCCGATTGGCGACGTAATATTGCTAAGTGTCTACGAGTGCAGCATTTTTATGGTGACCAAATACTTGGCTTGG ATTCTTGGCGGATTCATGTGCATCTTGCTTTGATCTCCGCAGGCTACCTACAAGCTCTTCTACTTTCATGGCCATTGTTG TTACTACCTTATCGATGGTGGCCTCGATCTCTCAGGAATAAACTCGGAGACCCAGGAAGTATCGAACGTTGGTGA
Upstream 100 bases:
>100_bases ATCAGAGTTCTCTACCTATGCTTGCTCCTGTGGAAAAAGCTTGGTTTAGCTACTCTTTTCAGATTCTTCCTTAATAGAAT AATCAACTTTAACCGAATCA
Downstream 100 bases:
>100_bases GCCACGCCACTTGCTTTGCATCCACCATCGCAATGCTCTTGCAGGAAGTAGACGCCACGGCAGCCTGCTCACGCAAGCAA TGATTGCTATCCAAGGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MQSACWRKKHNRKMSLLSKPLTIWIPTFRRPRQLSRLLNNFDQLGIIDFADVLISDNDPEGPLASAIANGDGDLPLHVRY RCNSANLSAGVNFLRAFECCTTPWLMIVGDDDWFKSGAADQIQDLIASLRDDIAAVKFDSSLFGSQPVCVSSGLGDYVEQ LSPRNYPDAFNNLCLISNWLFRTDSYRPYLSSAYLGYSSKISHLFPALQACVRDDAKLMFSHLQPVEHGVSDASWPKAAT WFEMVITLASFSGFIDSQNRYALLKLLLHSDWRRNIAKCLRVQHFYGDQILGLDSWRIHVHLALISAGYLQALLLSWPLL LLPYRWWPRSLRNKLGDPGSIERW
Sequences:
>Translated_344_residues MQSACWRKKHNRKMSLLSKPLTIWIPTFRRPRQLSRLLNNFDQLGIIDFADVLISDNDPEGPLASAIANGDGDLPLHVRY RCNSANLSAGVNFLRAFECCTTPWLMIVGDDDWFKSGAADQIQDLIASLRDDIAAVKFDSSLFGSQPVCVSSGLGDYVEQ LSPRNYPDAFNNLCLISNWLFRTDSYRPYLSSAYLGYSSKISHLFPALQACVRDDAKLMFSHLQPVEHGVSDASWPKAAT WFEMVITLASFSGFIDSQNRYALLKLLLHSDWRRNIAKCLRVQHFYGDQILGLDSWRIHVHLALISAGYLQALLLSWPLL LLPYRWWPRSLRNKLGDPGSIERW >Mature_344_residues MQSACWRKKHNRKMSLLSKPLTIWIPTFRRPRQLSRLLNNFDQLGIIDFADVLISDNDPEGPLASAIANGDGDLPLHVRY RCNSANLSAGVNFLRAFECCTTPWLMIVGDDDWFKSGAADQIQDLIASLRDDIAAVKFDSSLFGSQPVCVSSGLGDYVEQ LSPRNYPDAFNNLCLISNWLFRTDSYRPYLSSAYLGYSSKISHLFPALQACVRDDAKLMFSHLQPVEHGVSDASWPKAAT WFEMVITLASFSGFIDSQNRYALLKLLLHSDWRRNIAKCLRVQHFYGDQILGLDSWRIHVHLALISAGYLQALLLSWPLL LLPYRWWPRSLRNKLGDPGSIERW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39111; Mature: 39111
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSACWRKKHNRKMSLLSKPLTIWIPTFRRPRQLSRLLNNFDQLGIIDFADVLISDNDPE CCCHHHHHHHCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC GPLASAIANGDGDLPLHVRYRCNSANLSAGVNFLRAFECCTTPWLMIVGDDDWFKSGAAD CHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHH QIQDLIASLRDDIAAVKFDSSLFGSQPVCVSSGLGDYVEQLSPRNYPDAFNNLCLISNWL HHHHHHHHHHHHHHEEEECHHHCCCCCCCHHCCHHHHHHHCCCCCCCHHHCCHHHHHHHH FRTDSYRPYLSSAYLGYSSKISHLFPALQACVRDDAKLMFSHLQPVEHGVSDASWPKAAT HHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH WFEMVITLASFSGFIDSQNRYALLKLLLHSDWRRNIAKCLRVQHFYGDQILGLDSWRIHV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEE HLALISAGYLQALLLSWPLLLLPYRWWPRSLRNKLGDPGSIERW EEHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQSACWRKKHNRKMSLLSKPLTIWIPTFRRPRQLSRLLNNFDQLGIIDFADVLISDNDPE CCCHHHHHHHCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC GPLASAIANGDGDLPLHVRYRCNSANLSAGVNFLRAFECCTTPWLMIVGDDDWFKSGAAD CHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHH QIQDLIASLRDDIAAVKFDSSLFGSQPVCVSSGLGDYVEQLSPRNYPDAFNNLCLISNWL HHHHHHHHHHHHHHEEEECHHHCCCCCCCHHCCHHHHHHHCCCCCCCHHHCCHHHHHHHH FRTDSYRPYLSSAYLGYSSKISHLFPALQACVRDDAKLMFSHLQPVEHGVSDASWPKAAT HHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH WFEMVITLASFSGFIDSQNRYALLKLLLHSDWRRNIAKCLRVQHFYGDQILGLDSWRIHV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEE HLALISAGYLQALLLSWPLLLLPYRWWPRSLRNKLGDPGSIERW EEHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA