| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021841
Identifier: 124021841
GI number: 124021841
Start: 136770
End: 137813
Strand: Direct
Name: 124021841
Synonym: P9303_01281
Alternate gene names: NA
Gene position: 136770-137813 (Clockwise)
Preceding gene: 124021840
Following gene: 124021846
Centisome position: 5.1
GC content: 42.34
Gene sequence:
>1044_bases ATGAATTCTGATCTCCAGGTTAAACCACTAGTACGCTTTCTATGCATACCAGATGTTGATGATCGCCCAATTGGTGGTGT TAAGCAAATCTATCGTCATGTTGAGCATCTATGTGCATTAGGTTGGGATGCTGCAGTTCTCACAGAAACTCAAGGCTTTA AGCCATCATGGTTTGCTAGTCAAGCTCCGACAATCTCTATTTCAAATGCTCATTCTTTAGGCGAACTTAGTTCATCAGGT TGTATTCTTGTCCTTCCAGAAACCTTTATTAGCACTAACCTCTCCTGTATTCTAGGTTATGATCTGTCGAAATTACCTAC AGTTGTCTTTAATCAGAATGCATATTACACATATGGTCAAATACATGAAGGTACGGCCCTTGAGATACAACGTTTCTACG ACAATGCCCAGCTTCTCCAGGTGCTTGCTATTTCAGAAGATACTCATGCTTTTCTGTCTCGAAATCTTGGTTTATCAGAT GTGATGCTAAGTCGAATTATCAATGCGATCGAACCAACCTTTGTTAATGACCACCCCAAAAGCGACCTTATCCATTGGAT GCCTCGTAAGAATCCAGAGCATGTTCAAGCTATCCTGTTAGGAATTCAACGAATCCAACTTAAATATGGCCAAGGTTGGC AAGCCGCTCCACTGTTTAACCTCTCTCATTCTCAGGTTGCTGACAGGCTAAACCGCTCTCGTATATTCCTTTCTTTTGGT CACCCTGAAGGATTTGGATTGCCTATTGCAGAGGCCATGGCCTCCGGTTGTTATGTTATTGGTTATAGCGGTGGAGGAGG TCGAGAACTTTTTGGATTCGGAACGTCTCAAGAGATCAACTTTGGAGACTGGACTTCGTATCTAACCGCGATAAAAGATG TCTTGATTCGTTTTACAGAACAACCAAGAGAGATGGCTTTTCTTTTACAACGCAATTCTCACGCAGTTCGCAACTTGTAT AGCTTCGACCAGGAGAGGCAGTCAATTGCTCTGGCTTGGGAAAGAATTGAACAAGCTTTTTTTAGTTGGCGAGAATACCA ATGA
Upstream 100 bases:
>100_bases GGCTGCAAGGTAAAATGCTTTGTTTCACTCTGCCTTTTTATCCCTACAAATTTGGAATTACTTATTCAACCCTTATACTT AAAACTTATGCCTTTATATT
Downstream 100 bases:
>100_bases GCTCTCCCACAATTGCATATTCATGGCACAGCCATTTAATCAAGAGCATCATTAACTTTTTGACTTCATCAATTGCCTTT CGTTTAACATTATAGATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MNSDLQVKPLVRFLCIPDVDDRPIGGVKQIYRHVEHLCALGWDAAVLTETQGFKPSWFASQAPTISISNAHSLGELSSSG CILVLPETFISTNLSCILGYDLSKLPTVVFNQNAYYTYGQIHEGTALEIQRFYDNAQLLQVLAISEDTHAFLSRNLGLSD VMLSRIINAIEPTFVNDHPKSDLIHWMPRKNPEHVQAILLGIQRIQLKYGQGWQAAPLFNLSHSQVADRLNRSRIFLSFG HPEGFGLPIAEAMASGCYVIGYSGGGGRELFGFGTSQEINFGDWTSYLTAIKDVLIRFTEQPREMAFLLQRNSHAVRNLY SFDQERQSIALAWERIEQAFFSWREYQ
Sequences:
>Translated_347_residues MNSDLQVKPLVRFLCIPDVDDRPIGGVKQIYRHVEHLCALGWDAAVLTETQGFKPSWFASQAPTISISNAHSLGELSSSG CILVLPETFISTNLSCILGYDLSKLPTVVFNQNAYYTYGQIHEGTALEIQRFYDNAQLLQVLAISEDTHAFLSRNLGLSD VMLSRIINAIEPTFVNDHPKSDLIHWMPRKNPEHVQAILLGIQRIQLKYGQGWQAAPLFNLSHSQVADRLNRSRIFLSFG HPEGFGLPIAEAMASGCYVIGYSGGGGRELFGFGTSQEINFGDWTSYLTAIKDVLIRFTEQPREMAFLLQRNSHAVRNLY SFDQERQSIALAWERIEQAFFSWREYQ >Mature_347_residues MNSDLQVKPLVRFLCIPDVDDRPIGGVKQIYRHVEHLCALGWDAAVLTETQGFKPSWFASQAPTISISNAHSLGELSSSG CILVLPETFISTNLSCILGYDLSKLPTVVFNQNAYYTYGQIHEGTALEIQRFYDNAQLLQVLAISEDTHAFLSRNLGLSD VMLSRIINAIEPTFVNDHPKSDLIHWMPRKNPEHVQAILLGIQRIQLKYGQGWQAAPLFNLSHSQVADRLNRSRIFLSFG HPEGFGLPIAEAMASGCYVIGYSGGGGRELFGFGTSQEINFGDWTSYLTAIKDVLIRFTEQPREMAFLLQRNSHAVRNLY SFDQERQSIALAWERIEQAFFSWREYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39135; Mature: 39135
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSDLQVKPLVRFLCIPDVDDRPIGGVKQIYRHVEHLCALGWDAAVLTETQGFKPSWFAS CCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCC QAPTISISNAHSLGELSSSGCILVLPETFISTNLSCILGYDLSKLPTVVFNQNAYYTYGQ CCCEEEECCCCCCCCCCCCCEEEEECHHHHHCCCEEEECCCHHHCCEEEECCCCEEEECE IHEGTALEIQRFYDNAQLLQVLAISEDTHAFLSRNLGLSDVMLSRIINAIEPTFVNDHPK EECCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC SDLIHWMPRKNPEHVQAILLGIQRIQLKYGQGWQAAPLFNLSHSQVADRLNRSRIFLSFG CCHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCEECCCHHHHHHHHCCCEEEEEEC HPEGFGLPIAEAMASGCYVIGYSGGGGRELFGFGTSQEINFGDWTSYLTAIKDVLIRFTE CCCCCCCCHHHHHHCCCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC QPREMAFLLQRNSHAVRNLYSFDQERQSIALAWERIEQAFFSWREYQ CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSDLQVKPLVRFLCIPDVDDRPIGGVKQIYRHVEHLCALGWDAAVLTETQGFKPSWFAS CCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCC QAPTISISNAHSLGELSSSGCILVLPETFISTNLSCILGYDLSKLPTVVFNQNAYYTYGQ CCCEEEECCCCCCCCCCCCCEEEEECHHHHHCCCEEEECCCHHHCCEEEECCCCEEEECE IHEGTALEIQRFYDNAQLLQVLAISEDTHAFLSRNLGLSDVMLSRIINAIEPTFVNDHPK EECCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC SDLIHWMPRKNPEHVQAILLGIQRIQLKYGQGWQAAPLFNLSHSQVADRLNRSRIFLSFG CCHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCEECCCHHHHHHHHCCCEEEEEEC HPEGFGLPIAEAMASGCYVIGYSGGGGRELFGFGTSQEINFGDWTSYLTAIKDVLIRFTE CCCCCCCCHHHHHHCCCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC QPREMAFLLQRNSHAVRNLYSFDQERQSIALAWERIEQAFFSWREYQ CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA