| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021802
Identifier: 124021802
GI number: 124021802
Start: 87959
End: 88738
Strand: Reverse
Name: 124021802
Synonym: P9303_00871
Alternate gene names: NA
Gene position: 88738-87959 (Counterclockwise)
Preceding gene: 124021803
Following gene: 124021801
Centisome position: 3.31
GC content: 52.18
Gene sequence:
>780_bases TTGGCGCCCAAGAACATCGTGGACGACCTCCAAGAGACCGTTCGGGAGAGCCTCAACAAGCTCCCTAAAGACATTCTGGT TCTGCTTCGCAGTAAAAACCTGTTGAGATCACTCGTGCAGAGGATGGTCATTGATCAAGCCTGCGAGGCTGTTCAGTTAC CCGCAGAAAAACTGGATCAGGCGATTGCGAGTTTCTGCGAGCAGCATGGGCTAAGTGATGAGGAACGTCTCGAGCGATAT CTCTCTCATCAAGGTCTGATCAAGCCAGACCTCATTCATCAACTCGGGATCCCTTTGAAAGTTCAATATTTAAGCCTGAA AGAATTCAGCGCCAAAGCCGAAGCGCACTTCCTCAAACGCAAGGAAGAACTCGATCAATTCACCTACAGCTTGCTCCGAG TTGAGGATTCTGATCTGGCCCATGAGCTTTACCTTCAGATCGAAGCCGGAGAAGCCGATTTCACGCTGCTGGCAACAGAA CATTCCCAGGGCCGAGAAAGTGCGTCCCACGGCCTCGTAGGGCCTGCAAGCCTCGGCAGAGCCCATCCCCTCCTTCGCCA GCGCTTACGCACAGCAACCCCAGGGGTCTTACTGGAGCCTTTCAAAATCGAGCAATGGTGGGTCGTCACGCGGCTTGAAG AGCGGCAACTCGCCACATTTGACACCAACATGCAAAAACGCATGGCGATCGAATTATTCGATGGCTGGATTGAGCAACAA ACCAATCAACTGATCTCAGTTGTTCGCGGCGATCAATTTGAGAATGGTGCCCTCACATGA
Upstream 100 bases:
>100_bases TCCATGACGATGACTCATCTCTGCCAGCCCTACTAAGCGCGAAAACAATCAAAAGACAAAGCTGAGAACCTTTCGACTGA CACCGACCCACTAGCCTCAA
Downstream 100 bases:
>100_bases CACTGGCGAATCTGAATCACCCCCTTGCTCCACTGCAAAACGCTTTACAGACCAAAGGTGAGCGGCTGAAGTTTCAAATC GGTCAATCCCTATGCGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MAPKNIVDDLQETVRESLNKLPKDILVLLRSKNLLRSLVQRMVIDQACEAVQLPAEKLDQAIASFCEQHGLSDEERLERY LSHQGLIKPDLIHQLGIPLKVQYLSLKEFSAKAEAHFLKRKEELDQFTYSLLRVEDSDLAHELYLQIEAGEADFTLLATE HSQGRESASHGLVGPASLGRAHPLLRQRLRTATPGVLLEPFKIEQWWVVTRLEERQLATFDTNMQKRMAIELFDGWIEQQ TNQLISVVRGDQFENGALT
Sequences:
>Translated_259_residues MAPKNIVDDLQETVRESLNKLPKDILVLLRSKNLLRSLVQRMVIDQACEAVQLPAEKLDQAIASFCEQHGLSDEERLERY LSHQGLIKPDLIHQLGIPLKVQYLSLKEFSAKAEAHFLKRKEELDQFTYSLLRVEDSDLAHELYLQIEAGEADFTLLATE HSQGRESASHGLVGPASLGRAHPLLRQRLRTATPGVLLEPFKIEQWWVVTRLEERQLATFDTNMQKRMAIELFDGWIEQQ TNQLISVVRGDQFENGALT >Mature_258_residues APKNIVDDLQETVRESLNKLPKDILVLLRSKNLLRSLVQRMVIDQACEAVQLPAEKLDQAIASFCEQHGLSDEERLERYL SHQGLIKPDLIHQLGIPLKVQYLSLKEFSAKAEAHFLKRKEELDQFTYSLLRVEDSDLAHELYLQIEAGEADFTLLATEH SQGRESASHGLVGPASLGRAHPLLRQRLRTATPGVLLEPFKIEQWWVVTRLEERQLATFDTNMQKRMAIELFDGWIEQQT NQLISVVRGDQFENGALT
Specific function: Unknown
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29574; Mature: 29443
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKNIVDDLQETVRESLNKLPKDILVLLRSKNLLRSLVQRMVIDQACEAVQLPAEKLDQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AIASFCEQHGLSDEERLERYLSHQGLIKPDLIHQLGIPLKVQYLSLKEFSAKAEAHFLKR HHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH KEELDQFTYSLLRVEDSDLAHELYLQIEAGEADFTLLATEHSQGRESASHGLVGPASLGR HHHHHHHHHHHHHCCCHHHHEEHEEEEECCCCCEEEEEECCCCCHHHHHCCCCCCHHHHH AHPLLRQRLRTATPGVLLEPFKIEQWWVVTRLEERQLATFDTNMQKRMAIELFDGWIEQQ CCHHHHHHHHHCCCCCEECCCCCCHHHEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TNQLISVVRGDQFENGALT HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure APKNIVDDLQETVRESLNKLPKDILVLLRSKNLLRSLVQRMVIDQACEAVQLPAEKLDQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AIASFCEQHGLSDEERLERYLSHQGLIKPDLIHQLGIPLKVQYLSLKEFSAKAEAHFLKR HHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH KEELDQFTYSLLRVEDSDLAHELYLQIEAGEADFTLLATEHSQGRESASHGLVGPASLGR HHHHHHHHHHHHHCCCHHHHEEHEEEEECCCCCEEEEEECCCCCHHHHHCCCCCCHHHHH AHPLLRQRLRTATPGVLLEPFKIEQWWVVTRLEERQLATFDTNMQKRMAIELFDGWIEQQ CCHHHHHHHHHCCCCCEECCCCCCHHHEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TNQLISVVRGDQFENGALT HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA