| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is murB
Identifier: 124021740
GI number: 124021740
Start: 28396
End: 29319
Strand: Reverse
Name: murB
Synonym: P9303_00251
Alternate gene names: 124021740
Gene position: 29319-28396 (Counterclockwise)
Preceding gene: 124021741
Following gene: 124021739
Centisome position: 1.09
GC content: 54.98
Gene sequence:
>924_bases ATGCCCACCCTCCCTGGCCGCCTGACCATAGTGAAGGGGATCAAGCCCCAACCACTGGTTTCTCTTGCCAACTTCACGAG CTGGCGCGTCGGAGGGCCTGCGGAATGGTTTGCATCGCCCAGCAGCGTGGAGGAACTACAGACACTGATTGCTTGGGCCT ATGAACAGAAGATGCCCTGTCGAGTCATCGGAGCAGGATCAAACCTACTGATCAACGACGCTGGCTTGCCGGGCCTGAGC ATTTGCATGCGCAAACTCCAAGGGAGCGACCTAGATCCAAAGACTGGCATTGTCGAAGCCTTGGCCGGTGAACCAATCCC CAACCTTTCCAAACGCGCCGCAAAGGCTGGCCTGCATGGCCTGGAATGGGCCGTTGGGATTCCTGGAACAGTTGGTGGTG CAACCGTCATGAATGCTGGAGCCCAGGGCGGCTGCACAGCCGACTGGCTGGAATCTGTACAAGTCATCGACCTCAATGGC GAGGGCCCTTTTGAACTGAGCCGCCAAGAGCTTGACTACGCCTACCGAAAAAGTCTCTTGCAGGAAAAAACACTCGTCGT GCTCTCAGCCAGATTCCGCCTAGACCCCGGCCATGATTACAAGGAGCTCAATCAAATCACACATAAAAACCTCACTCATC GCACGACCACCCAGCCTTATCAATTGCCTAGTTGCGGAAGTGTCTTTCGCAACCCAGAACCCCTCAAAGCTGGTCGTCTA ATCGAAGCGCTGGGTCTGAAAGGTCACCGCATTGGAGGAGCTGAAGTCTCCCCCATTCACGCAAACTTCATCGTCAATAT TGGTGGAGCCACGGCTGCCGACATCAATCAAATGATCAACCTCATTCAGCAACGGGTGCAGATGGCCCATGGAGTGATGC TTCATCCTGAAGTGAAACGACTTGGTTTCGAAGCGACCGCTTAA
Upstream 100 bases:
>100_bases TGCAAAAACACAGCCTCAAAGGTGACCTAGTCCTCGCCATGGGTGCAGGCAATATCAACAATCTATGGAGACAACTGACA CGTCTTGACAACGCAAAGAC
Downstream 100 bases:
>100_bases TCTGCCCATTCCTCCAGCAACGCAATGGCAGGGTTCGGACTTCCCAATTTCGGCCAACTCACCGAAGCCTTCCGCAAGGC CCAACAAATCCAACAAAACG
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPTLPGRLTIVKGIKPQPLVSLANFTSWRVGGPAEWFASPSSVEELQTLIAWAYEQKMPCRVIGAGSNLLINDAGLPGLS ICMRKLQGSDLDPKTGIVEALAGEPIPNLSKRAAKAGLHGLEWAVGIPGTVGGATVMNAGAQGGCTADWLESVQVIDLNG EGPFELSRQELDYAYRKSLLQEKTLVVLSARFRLDPGHDYKELNQITHKNLTHRTTTQPYQLPSCGSVFRNPEPLKAGRL IEALGLKGHRIGGAEVSPIHANFIVNIGGATAADINQMINLIQQRVQMAHGVMLHPEVKRLGFEATA
Sequences:
>Translated_307_residues MPTLPGRLTIVKGIKPQPLVSLANFTSWRVGGPAEWFASPSSVEELQTLIAWAYEQKMPCRVIGAGSNLLINDAGLPGLS ICMRKLQGSDLDPKTGIVEALAGEPIPNLSKRAAKAGLHGLEWAVGIPGTVGGATVMNAGAQGGCTADWLESVQVIDLNG EGPFELSRQELDYAYRKSLLQEKTLVVLSARFRLDPGHDYKELNQITHKNLTHRTTTQPYQLPSCGSVFRNPEPLKAGRL IEALGLKGHRIGGAEVSPIHANFIVNIGGATAADINQMINLIQQRVQMAHGVMLHPEVKRLGFEATA >Mature_306_residues PTLPGRLTIVKGIKPQPLVSLANFTSWRVGGPAEWFASPSSVEELQTLIAWAYEQKMPCRVIGAGSNLLINDAGLPGLSI CMRKLQGSDLDPKTGIVEALAGEPIPNLSKRAAKAGLHGLEWAVGIPGTVGGATVMNAGAQGGCTADWLESVQVIDLNGE GPFELSRQELDYAYRKSLLQEKTLVVLSARFRLDPGHDYKELNQITHKNLTHRTTTQPYQLPSCGSVFRNPEPLKAGRLI EALGLKGHRIGGAEVSPIHANFIVNIGGATAADINQMINLIQQRVQMAHGVMLHPEVKRLGFEATA
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
Organism=Escherichia coli, GI1790407, Length=308, Percent_Identity=25.974025974026, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_PROM3 (A2C5M2)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016047.1 - ProteinModelPortal: A2C5M2 - SMR: A2C5M2 - STRING: A2C5M2 - GeneID: 4777840 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_00251 - eggNOG: COG0812 - HOGENOM: HBG686573 - OMA: LESSKIP - ProtClustDB: PRK13905 - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 33018; Mature: 32886
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 176-176 ACT_SITE 227-227 ACT_SITE 297-297
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLPGRLTIVKGIKPQPLVSLANFTSWRVGGPAEWFASPSSVEELQTLIAWAYEQKMPC CCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCE RVIGAGSNLLINDAGLPGLSICMRKLQGSDLDPKTGIVEALAGEPIPNLSKRAAKAGLHG EEEECCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCC LEWAVGIPGTVGGATVMNAGAQGGCTADWLESVQVIDLNGEGPFELSRQELDYAYRKSLL CEEEECCCCCCCCHHHHCCCCCCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHH QEKTLVVLSARFRLDPGHDYKELNQITHKNLTHRTTTQPYQLPSCGSVFRNPEPLKAGRL HHHHEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHH IEALGLKGHRIGGAEVSPIHANFIVNIGGATAADINQMINLIQQRVQMAHGVMLHPEVKR HHHHCCCCCCCCCCEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCHHHH LGFEATA CCCCCCC >Mature Secondary Structure PTLPGRLTIVKGIKPQPLVSLANFTSWRVGGPAEWFASPSSVEELQTLIAWAYEQKMPC CCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCE RVIGAGSNLLINDAGLPGLSICMRKLQGSDLDPKTGIVEALAGEPIPNLSKRAAKAGLHG EEEECCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCC LEWAVGIPGTVGGATVMNAGAQGGCTADWLESVQVIDLNGEGPFELSRQELDYAYRKSLL CEEEECCCCCCCCHHHHCCCCCCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHH QEKTLVVLSARFRLDPGHDYKELNQITHKNLTHRTTTQPYQLPSCGSVFRNPEPLKAGRL HHHHEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHH IEALGLKGHRIGGAEVSPIHANFIVNIGGATAADINQMINLIQQRVQMAHGVMLHPEVKR HHHHCCCCCCCCCCEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCHHHH LGFEATA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA