| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is dnaJ [H]
Identifier: 124021736
GI number: 124021736
Start: 25743
End: 26879
Strand: Direct
Name: dnaJ [H]
Synonym: P9303_00211
Alternate gene names: 124021736
Gene position: 25743-26879 (Clockwise)
Preceding gene: 124021735
Following gene: 124021737
Centisome position: 0.96
GC content: 51.28
Gene sequence:
>1137_bases ATGGCTGATTATTACGACCTGCTAGGGGTCAGCAAAGATGCTGATGGCGATACCCTGAAGCGGGCTTATCGCCGTTTGGC ACGTCAGTATCACCCAGATATCAATAAGGATCCTGGGGCAGAGGATCGTTTCAAGGAGATCGGTCGTGCTTATGAGGTGC TTAGCGATCCTCAGACTCGTGGCCGTTATGACCAATTTGGCGAGGCTGGGCTTGGGGGTGCAGGAGGCATGCCCGATGTG GGAGATATGGGTGGCTTTGCCGATCTCTTTGAGACCTTTTTTAGTGGTTTTGGTGGGGCTGGTGGATCTGGTGGTGGTCG TCCACGACGACGGGGACCGCAGCAAGGAGATGATCTTCGCTACGACTTGAAGATTGATTTTGAGCAAGCTGTTTTCGGAC AGGAACGAGAAATCAAAATTCCCCATCTTGAAACTTGCGACACCTGTAACGGCACTGGAGCCAAGGTGGGTAGTGGACCA ACGACCTGTTCCACTTGTGGTGGTGTTGGTCAGGTGCGACGAGCGACCAGAACACCTTTCGGTAGCTTCACTCAGGTGGC GGAATGTCCCAGTTGTGAAGGTACTGGACAGGTGATTTCAGATCCTTGTGGTGCATGTGCTGGACAGGGTGTACGTCAGG TTCGCAAGAAATTGCGCATCAATATTCCCGCTGGGGTTGATACCGGAACTCGTCTGAGAGTTGCCGGTGAGGGAAATGCT GGTTTGCGGGGTGGACCTTCTGGAGACCTTTACGTATTTTTGACGGTGAAATCCCATCCCCAATTGCGACGTGATGGGAT TACGGTGCTTTCAGAAGTCAACGTGAGTTATCTCCAAGCAATCCTTGGAGACATCATTGAGGTTGATACGGTTGATGGCA ATACCAGTCTTGAGATTCCTGCTGGAACTCAGCCCAATGCTGTACTAACCCTTGAAAACAAGGGTATTCCTAAGCTAGGC AACCCAGTAGCAAGAGGTAATCAGCGCATTTCTATCAATGTGAAGTTGCCGCTTCGTCTTTCTGATGAGGAGAGGGGCTT GCTTGAAGATCTGGCTGGCCATCATTCCGCTAAAGGCAGGCAGCATCACCACCACAACAGTGGTTTGTTTGCTCGTTTGT TTGGTCAGAAAGGATGA
Upstream 100 bases:
>100_bases ATGACTCCACTGCAACTTTTCAAGGTGAGGCAGATCCTGCCGAGCCAGGGGTCTGATTGCATGCTGTTGCCCTTTAGGGT GAAGGAGTGTTGACGAGCTG
Downstream 100 bases:
>100_bases CCGCCCAGCTTGTTCCTGATCAGCAGATTGATTTGCGTGGCACTCCCTGCCCGATCAACTTTATTCGCTGTCGCTTGGCT CTCGAGGGTCTTAAGGCCAA
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MADYYDLLGVSKDADGDTLKRAYRRLARQYHPDINKDPGAEDRFKEIGRAYEVLSDPQTRGRYDQFGEAGLGGAGGMPDV GDMGGFADLFETFFSGFGGAGGSGGGRPRRRGPQQGDDLRYDLKIDFEQAVFGQEREIKIPHLETCDTCNGTGAKVGSGP TTCSTCGGVGQVRRATRTPFGSFTQVAECPSCEGTGQVISDPCGACAGQGVRQVRKKLRINIPAGVDTGTRLRVAGEGNA GLRGGPSGDLYVFLTVKSHPQLRRDGITVLSEVNVSYLQAILGDIIEVDTVDGNTSLEIPAGTQPNAVLTLENKGIPKLG NPVARGNQRISINVKLPLRLSDEERGLLEDLAGHHSAKGRQHHHHNSGLFARLFGQKG
Sequences:
>Translated_378_residues MADYYDLLGVSKDADGDTLKRAYRRLARQYHPDINKDPGAEDRFKEIGRAYEVLSDPQTRGRYDQFGEAGLGGAGGMPDV GDMGGFADLFETFFSGFGGAGGSGGGRPRRRGPQQGDDLRYDLKIDFEQAVFGQEREIKIPHLETCDTCNGTGAKVGSGP TTCSTCGGVGQVRRATRTPFGSFTQVAECPSCEGTGQVISDPCGACAGQGVRQVRKKLRINIPAGVDTGTRLRVAGEGNA GLRGGPSGDLYVFLTVKSHPQLRRDGITVLSEVNVSYLQAILGDIIEVDTVDGNTSLEIPAGTQPNAVLTLENKGIPKLG NPVARGNQRISINVKLPLRLSDEERGLLEDLAGHHSAKGRQHHHHNSGLFARLFGQKG >Mature_377_residues ADYYDLLGVSKDADGDTLKRAYRRLARQYHPDINKDPGAEDRFKEIGRAYEVLSDPQTRGRYDQFGEAGLGGAGGMPDVG DMGGFADLFETFFSGFGGAGGSGGGRPRRRGPQQGDDLRYDLKIDFEQAVFGQEREIKIPHLETCDTCNGTGAKVGSGPT TCSTCGGVGQVRRATRTPFGSFTQVAECPSCEGTGQVISDPCGACAGQGVRQVRKKLRINIPAGVDTGTRLRVAGEGNAG LRGGPSGDLYVFLTVKSHPQLRRDGITVLSEVNVSYLQAILGDIIEVDTVDGNTSLEIPAGTQPNAVLTLENKGIPKLGN PVARGNQRISINVKLPLRLSDEERGLLEDLAGHHSAKGRQHHHHNSGLFARLFGQKG
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI205360838, Length=355, Percent_Identity=33.5211267605634, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI205360840, Length=355, Percent_Identity=33.5211267605634, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI5031741, Length=356, Percent_Identity=32.8651685393258, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI4504511, Length=359, Percent_Identity=31.4763231197772, Blast_Score=148, Evalue=9e-36, Organism=Homo sapiens, GI194328758, Length=348, Percent_Identity=29.3103448275862, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI194328760, Length=348, Percent_Identity=29.3103448275862, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI7706495, Length=359, Percent_Identity=28.9693593314763, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI194328762, Length=313, Percent_Identity=26.8370607028754, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI201862587, Length=69, Percent_Identity=59.4202898550725, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI201862518, Length=69, Percent_Identity=59.4202898550725, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI56549115, Length=69, Percent_Identity=59.4202898550725, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI194306642, Length=205, Percent_Identity=37.0731707317073, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI194306640, Length=205, Percent_Identity=37.0731707317073, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI6631085, Length=69, Percent_Identity=57.9710144927536, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI56687498, Length=68, Percent_Identity=55.8823529411765, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI27151736, Length=110, Percent_Identity=45.4545454545455, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI5453690, Length=66, Percent_Identity=57.5757575757576, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI88501736, Length=110, Percent_Identity=45.4545454545455, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI9558755, Length=112, Percent_Identity=41.0714285714286, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI39204547, Length=160, Percent_Identity=35.625, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI22749377, Length=109, Percent_Identity=41.2844036697248, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI47777312, Length=99, Percent_Identity=46.4646464646465, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI72534740, Length=65, Percent_Identity=56.9230769230769, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI217035105, Length=78, Percent_Identity=51.2820512820513, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI68077168, Length=101, Percent_Identity=44.5544554455446, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI21553335, Length=101, Percent_Identity=39.6039603960396, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI68077166, Length=101, Percent_Identity=44.5544554455446, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI45504382, Length=71, Percent_Identity=47.887323943662, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI24308127, Length=75, Percent_Identity=46.6666666666667, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI4885495, Length=68, Percent_Identity=47.0588235294118, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI23503241, Length=78, Percent_Identity=46.1538461538462, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI17388799, Length=68, Percent_Identity=47.0588235294118, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI29126218, Length=71, Percent_Identity=43.6619718309859, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1786197, Length=357, Percent_Identity=44.2577030812325, Blast_Score=272, Evalue=2e-74, Organism=Escherichia coli, GI1787235, Length=366, Percent_Identity=27.0491803278689, Blast_Score=120, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17553098, Length=357, Percent_Identity=33.3333333333333, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17553096, Length=362, Percent_Identity=33.1491712707182, Blast_Score=168, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17507263, Length=355, Percent_Identity=30.4225352112676, Blast_Score=127, Evalue=7e-30, Organism=Caenorhabditis elegans, GI212645553, Length=364, Percent_Identity=28.8461538461538, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17563890, Length=365, Percent_Identity=28.2191780821918, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17534355, Length=193, Percent_Identity=34.7150259067358, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI115532378, Length=70, Percent_Identity=55.7142857142857, Blast_Score=85, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17554644, Length=99, Percent_Identity=46.4646464646465, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI115532476, Length=65, Percent_Identity=53.8461538461538, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17568643, Length=69, Percent_Identity=50.7246376811594, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17538236, Length=123, Percent_Identity=36.5853658536585, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324265, Length=362, Percent_Identity=34.8066298342541, Blast_Score=163, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6321094, Length=399, Percent_Identity=32.5814536340852, Blast_Score=144, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6323870, Length=288, Percent_Identity=32.6388888888889, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323119, Length=367, Percent_Identity=25.8855585831063, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6324252, Length=429, Percent_Identity=23.7762237762238, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320888, Length=100, Percent_Identity=43, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6322194, Length=98, Percent_Identity=43.8775510204082, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6324321, Length=63, Percent_Identity=53.968253968254, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323813, Length=110, Percent_Identity=39.0909090909091, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324103, Length=71, Percent_Identity=52.112676056338, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI45549272, Length=373, Percent_Identity=29.7587131367292, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI45552813, Length=373, Percent_Identity=29.7587131367292, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI45552811, Length=373, Percent_Identity=29.7587131367292, Blast_Score=147, Evalue=8e-36, Organism=Drosophila melanogaster, GI20129487, Length=357, Percent_Identity=31.6526610644258, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI24584014, Length=357, Percent_Identity=31.6526610644258, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI24646562, Length=343, Percent_Identity=33.2361516034985, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI24646560, Length=343, Percent_Identity=33.2361516034985, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI24646558, Length=343, Percent_Identity=33.2361516034985, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI24646556, Length=343, Percent_Identity=33.2361516034985, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI21357547, Length=343, Percent_Identity=33.2361516034985, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI85726398, Length=375, Percent_Identity=27.7333333333333, Blast_Score=118, Evalue=6e-27, Organism=Drosophila melanogaster, GI28574949, Length=357, Percent_Identity=25.2100840336134, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI19920464, Length=360, Percent_Identity=29.4444444444444, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24658562, Length=69, Percent_Identity=56.5217391304348, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI24658555, Length=69, Percent_Identity=56.5217391304348, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI24654066, Length=77, Percent_Identity=49.3506493506493, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654070, Length=77, Percent_Identity=49.3506493506493, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654068, Length=77, Percent_Identity=49.3506493506493, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654072, Length=77, Percent_Identity=49.3506493506493, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=49.2753623188406, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574723, Length=68, Percent_Identity=50, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI17737735, Length=68, Percent_Identity=50, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24668523, Length=68, Percent_Identity=50, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI21358273, Length=65, Percent_Identity=52.3076923076923, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI19922238, Length=78, Percent_Identity=44.8717948717949, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24641698, Length=62, Percent_Identity=46.7741935483871, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641696, Length=62, Percent_Identity=46.7741935483871, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI161077138, Length=66, Percent_Identity=50, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI17648033, Length=112, Percent_Identity=34.8214285714286, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24584630, Length=112, Percent_Identity=34.8214285714286, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 40350; Mature: 40218
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2 ; PS00637 DNAJ_CXXCXGXG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADYYDLLGVSKDADGDTLKRAYRRLARQYHPDINKDPGAEDRFKEIGRAYEVLSDPQTR CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHC GRYDQFGEAGLGGAGGMPDVGDMGGFADLFETFFSGFGGAGGSGGGRPRRRGPQQGDDLR CCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE YDLKIDFEQAVFGQEREIKIPHLETCDTCNGTGAKVGSGPTTCSTCGGVGQVRRATRTPF EEEEECHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCC GSFTQVAECPSCEGTGQVISDPCGACAGQGVRQVRKKLRINIPAGVDTGTRLRVAGEGNA CCHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCC GLRGGPSGDLYVFLTVKSHPQLRRDGITVLSEVNVSYLQAILGDIIEVDTVDGNTSLEIP CCCCCCCCCEEEEEEECCCCCHHHCCHHHHHHCCHHHHHHHHHHHEEEEECCCCCEEEEC AGTQPNAVLTLENKGIPKLGNPVARGNQRISINVKLPLRLSDEERGLLEDLAGHHSAKGR CCCCCCEEEEECCCCCCCCCCHHHCCCEEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCC QHHHHNSGLFARLFGQKG CCCCCCCCCEEEECCCCC >Mature Secondary Structure ADYYDLLGVSKDADGDTLKRAYRRLARQYHPDINKDPGAEDRFKEIGRAYEVLSDPQTR CCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHC GRYDQFGEAGLGGAGGMPDVGDMGGFADLFETFFSGFGGAGGSGGGRPRRRGPQQGDDLR CCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE YDLKIDFEQAVFGQEREIKIPHLETCDTCNGTGAKVGSGPTTCSTCGGVGQVRRATRTPF EEEEECHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCC GSFTQVAECPSCEGTGQVISDPCGACAGQGVRQVRKKLRINIPAGVDTGTRLRVAGEGNA CCHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCC GLRGGPSGDLYVFLTVKSHPQLRRDGITVLSEVNVSYLQAILGDIIEVDTVDGNTSLEIP CCCCCCCCCEEEEEEECCCCCHHHCCHHHHHHCCHHHHHHHHHHHEEEEECCCCCEEEEC AGTQPNAVLTLENKGIPKLGNPVARGNQRISINVKLPLRLSDEERGLLEDLAGHHSAKGR CCCCCCEEEEECCCCCCCCCCHHHCCCEEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCC QHHHHNSGLFARLFGQKG CCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]