| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124026859
Identifier: 124026859
GI number: 124026859
Start: 1812770
End: 1813225
Strand: Reverse
Name: 124026859
Synonym: NATL1_21541
Alternate gene names: NA
Gene position: 1813225-1812770 (Counterclockwise)
Preceding gene: 124026861
Following gene: 124026858
Centisome position: 97.24
GC content: 37.06
Gene sequence:
>456_bases ATGGAACAAATATCTCGCACGTCGATTCAAGCAAAAGTCTTTGAGTTCGCATTGTTGGAATTAATTTATAGTAAGCGAGA TAGCTTTCAGCCATTATGGAGCGTAGATAGTTGGGCTAAATTTTTAATTTGGTTAAGTTTAAATTGTGGGCTTTCTGGAG AAAAAGAAAGCCTAGAAATGTTTGCGAAAGCGATGGGTTCTGCTTTAACAAGTCGAATGAGAAAAATATTTTTTGAAAGA GCTTTAGAGGATTTGTCATTACATGTGATGGCTGATCCTGCAGAAGCGCAAGTTTTGATTATGCCTATCGCTTTAGATAA GATGATTAATGATAATGACGTAGTTCAAGCCTTAGAAAGGATCGGTTTAAGTGACAAGGTTTCTTTATCTTCGGCTGCAT GGGAAAGGCATGACTCAATAGTTTCGATTCCTTGGAACGTGAAAAGTGACATTTGA
Upstream 100 bases:
>100_bases GATCGGAGAACTCAAGTTCAGGGTCGTTCAGATCCATGACAAATAAACAGATAACGAACAATAAACACTAGTTTGGCTGT AGTTGGAGAAAATGTCTTCT
Downstream 100 bases:
>100_bases ATTTAGGAAAAGCAAGAATGATGTAAAACTTTTGTCGGGAATGAGTAAATTAAATTAAACACATTTTTTTTCTGTGATAG AGCGGGCAAAAACTACAAAA
Product: protein phosphatase 2A regulatory B s
Products: NA
Alternate protein names: A Regulatory B Subunit
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MEQISRTSIQAKVFEFALLELIYSKRDSFQPLWSVDSWAKFLIWLSLNCGLSGEKESLEMFAKAMGSALTSRMRKIFFER ALEDLSLHVMADPAEAQVLIMPIALDKMINDNDVVQALERIGLSDKVSLSSAAWERHDSIVSIPWNVKSDI
Sequences:
>Translated_151_residues MEQISRTSIQAKVFEFALLELIYSKRDSFQPLWSVDSWAKFLIWLSLNCGLSGEKESLEMFAKAMGSALTSRMRKIFFER ALEDLSLHVMADPAEAQVLIMPIALDKMINDNDVVQALERIGLSDKVSLSSAAWERHDSIVSIPWNVKSDI >Mature_151_residues MEQISRTSIQAKVFEFALLELIYSKRDSFQPLWSVDSWAKFLIWLSLNCGLSGEKESLEMFAKAMGSALTSRMRKIFFER ALEDLSLHVMADPAEAQVLIMPIALDKMINDNDVVQALERIGLSDKVSLSSAAWERHDSIVSIPWNVKSDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17109; Mature: 17109
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQISRTSIQAKVFEFALLELIYSKRDSFQPLWSVDSWAKFLIWLSLNCGLSGEKESLEM CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH FAKAMGSALTSRMRKIFFERALEDLSLHVMADPAEAQVLIMPIALDKMINDNDVVQALER HHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEHHHHHCCCCHHHHHHHH IGLSDKVSLSSAAWERHDSIVSIPWNVKSDI CCCCCCCHHHHHHHHHCCCEEECCCCCCCCC >Mature Secondary Structure MEQISRTSIQAKVFEFALLELIYSKRDSFQPLWSVDSWAKFLIWLSLNCGLSGEKESLEM CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH FAKAMGSALTSRMRKIFFERALEDLSLHVMADPAEAQVLIMPIALDKMINDNDVVQALER HHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEHHHHHCCCCHHHHHHHH IGLSDKVSLSSAAWERHDSIVSIPWNVKSDI CCCCCCCHHHHHHHHHCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA