| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026809
Identifier: 124026809
GI number: 124026809
Start: 1748701
End: 1750359
Strand: Reverse
Name: 124026809
Synonym: NATL1_21041
Alternate gene names: NA
Gene position: 1750359-1748701 (Counterclockwise)
Preceding gene: 124026810
Following gene: 124026808
Centisome position: 93.87
GC content: 34.36
Gene sequence:
>1659_bases ATGAGTACAAACAGTACTGCAATTTATTATCAATCTGATGCCTATACAACTAGCAAGCAGAAGCTCATGGGTCGTAATGC TGCTGGTGAATCTTTTCTTAGGGCTTATTTTAAATATGATAATAGTCATAATCTTTATGTTTATCCTGTATCTCTAGAGG ATTTAGATTGTTTTAAAAGGAAAGCCATTGCTTACAATCGTCATGAACCTATTGAGTGTATAACCAAGAGATCTTTAACT AAGCTTGTTGATGTTGGAAATCTTTTTGTACCTGGTCCAGGTCTTGATCAATTTGCTCATGAACGTTGTTTCTCTGGTCA TAATTCTTGGAGTCTTTGCGGTATCACACATACAACCAGCAGTATTAACGCTATGGATTGTATTTCCTCTCTCGCCACTG CTCCTATTCAAGAATGGGATGCTTTGATTTGTACTAGTAACGCTGTTAAAAAACATGTTAATGAAACTCTTAATTCCCAA TTTGAATATTTAAAATATCGTTTAGGAATTTCAAAGCTCGTATTACCCCAATTACCCGTTATTCCTCTTGGAATTCATAC CTCTGACTTTCATTTTACCGATTCCGAAAAGTTTTCTTCTAGAAATACTTTGGGCATTGATGATAATTCAATTGTGATTT TATACACAGGTCGATTATCTTTTCATGCTAAGGCTCATCCCCTAGCGATGTATCAAGCTTTGGAGTTATCTTCAAAACAA ACAAATATTCCTATTGTGTTAATTGAATGTGGATGGCATGCGAATCAGTCAATAGCAGATTCTTTCACTGAAGCAGCTCA AAGATTTTGCCCCTCGATAAAAGTACTTCATTTAGATGGTCGCATTAATAAAAATCGTTCTTTGGCTTGGTCTTCTGCTG ATATCTTCTGTTCTTTGCCTGATAATATTCAAGAAACTTTTGGAATCGTTCCCATTGAGGCAATGGCTGCGGGTTTACCC GTAGTAGTATCTGATTGGGATGGCTATAAAGATACAGTTAGAGATGAAATAGATGGTTTTAGAATTCCAACGTTAATTCC CGAAGAAGGTCTTGGTGCGGATCTTATGCAAAGATATTCTCTGGGTATTGATACTTATGATATGTATTGTGGTCATACCT CAAGTCTGATTTCCGTTGATGTTTTATCTGCTAATAGAGCATTTACAAAATTGATTCAATCACCTTCTCTTCGAGTCAAG ATGGGTGCATCTGGTCTTAAAAGAGCACGAGAAATGTATGACTGGTCAGTTATTTATAAACAGTATGATGACCTTTTTAA TCATTTAAACCTGATTAGAAAGAGCAGTGTACTTAATGATTTTGACAAACAACGTTTTTGGCCCGGACGAGTTAATCCCT TTCAGGGTTTTTCAGATTATGCTACCAATCAACTTTCATTAAATTCAAAAGTGAGTTTAGTTGATGATGATTTTCAAATT ACATTTCAACGATACATTGATATTAAGGATCTAAAAATGGTCTCTTTTGCTTCATATATTTTACCAACACATGAAGAAGT TAAATGTATATTTAATAATCTTAGTAAAGCTCCAATGAAAGCTTGTGATCTATTAATTCCATTTGAACTAAAAAGAAGAC CTTTCATCTTAAGAACTTTAGTCTCTTTACTCAAGTTTAATCTTATTAAACTAGTCTAA
Upstream 100 bases:
>100_bases CTTGTTGCATAAACTTTGTCCACATAAAAAAGACCCCTAAGTAGGGGTCTTTTTTTTTCTTTAAAAATTCATATAGTCTG AGCCATCATCCTCTATTTTT
Downstream 100 bases:
>100_bases TGAAGATTTTATTTGTTCATCAAAACTTCCCCGGACAATTTAAGTTTTTAGCTCCCGCTTTAATTAAAAGAGGGCATTCT GTCTCAGCGTTATGCTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MSTNSTAIYYQSDAYTTSKQKLMGRNAAGESFLRAYFKYDNSHNLYVYPVSLEDLDCFKRKAIAYNRHEPIECITKRSLT KLVDVGNLFVPGPGLDQFAHERCFSGHNSWSLCGITHTTSSINAMDCISSLATAPIQEWDALICTSNAVKKHVNETLNSQ FEYLKYRLGISKLVLPQLPVIPLGIHTSDFHFTDSEKFSSRNTLGIDDNSIVILYTGRLSFHAKAHPLAMYQALELSSKQ TNIPIVLIECGWHANQSIADSFTEAAQRFCPSIKVLHLDGRINKNRSLAWSSADIFCSLPDNIQETFGIVPIEAMAAGLP VVVSDWDGYKDTVRDEIDGFRIPTLIPEEGLGADLMQRYSLGIDTYDMYCGHTSSLISVDVLSANRAFTKLIQSPSLRVK MGASGLKRAREMYDWSVIYKQYDDLFNHLNLIRKSSVLNDFDKQRFWPGRVNPFQGFSDYATNQLSLNSKVSLVDDDFQI TFQRYIDIKDLKMVSFASYILPTHEEVKCIFNNLSKAPMKACDLLIPFELKRRPFILRTLVSLLKFNLIKLV
Sequences:
>Translated_552_residues MSTNSTAIYYQSDAYTTSKQKLMGRNAAGESFLRAYFKYDNSHNLYVYPVSLEDLDCFKRKAIAYNRHEPIECITKRSLT KLVDVGNLFVPGPGLDQFAHERCFSGHNSWSLCGITHTTSSINAMDCISSLATAPIQEWDALICTSNAVKKHVNETLNSQ FEYLKYRLGISKLVLPQLPVIPLGIHTSDFHFTDSEKFSSRNTLGIDDNSIVILYTGRLSFHAKAHPLAMYQALELSSKQ TNIPIVLIECGWHANQSIADSFTEAAQRFCPSIKVLHLDGRINKNRSLAWSSADIFCSLPDNIQETFGIVPIEAMAAGLP VVVSDWDGYKDTVRDEIDGFRIPTLIPEEGLGADLMQRYSLGIDTYDMYCGHTSSLISVDVLSANRAFTKLIQSPSLRVK MGASGLKRAREMYDWSVIYKQYDDLFNHLNLIRKSSVLNDFDKQRFWPGRVNPFQGFSDYATNQLSLNSKVSLVDDDFQI TFQRYIDIKDLKMVSFASYILPTHEEVKCIFNNLSKAPMKACDLLIPFELKRRPFILRTLVSLLKFNLIKLV >Mature_551_residues STNSTAIYYQSDAYTTSKQKLMGRNAAGESFLRAYFKYDNSHNLYVYPVSLEDLDCFKRKAIAYNRHEPIECITKRSLTK LVDVGNLFVPGPGLDQFAHERCFSGHNSWSLCGITHTTSSINAMDCISSLATAPIQEWDALICTSNAVKKHVNETLNSQF EYLKYRLGISKLVLPQLPVIPLGIHTSDFHFTDSEKFSSRNTLGIDDNSIVILYTGRLSFHAKAHPLAMYQALELSSKQT NIPIVLIECGWHANQSIADSFTEAAQRFCPSIKVLHLDGRINKNRSLAWSSADIFCSLPDNIQETFGIVPIEAMAAGLPV VVSDWDGYKDTVRDEIDGFRIPTLIPEEGLGADLMQRYSLGIDTYDMYCGHTSSLISVDVLSANRAFTKLIQSPSLRVKM GASGLKRAREMYDWSVIYKQYDDLFNHLNLIRKSSVLNDFDKQRFWPGRVNPFQGFSDYATNQLSLNSKVSLVDDDFQIT FQRYIDIKDLKMVSFASYILPTHEEVKCIFNNLSKAPMKACDLLIPFELKRRPFILRTLVSLLKFNLIKLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62464; Mature: 62333
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNSTAIYYQSDAYTTSKQKLMGRNAAGESFLRAYFKYDNSHNLYVYPVSLEDLDCFKR CCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH KAIAYNRHEPIECITKRSLTKLVDVGNLFVPGPGLDQFAHERCFSGHNSWSLCGITHTTS HHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCC SINAMDCISSLATAPIQEWDALICTSNAVKKHVNETLNSQFEYLKYRLGISKLVLPQLPV CCHHHHHHHHHHHCCHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCE IPLGIHTSDFHFTDSEKFSSRNTLGIDDNSIVILYTGRLSFHAKAHPLAMYQALELSSKQ EEEEECCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCEEECCCCCHHHHHHHHHCCCCC TNIPIVLIECGWHANQSIADSFTEAAQRFCPSIKVLHLDGRINKNRSLAWSSADIFCSLP CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCCEEEECC DNIQETFGIVPIEAMAAGLPVVVSDWDGYKDTVRDEIDGFRIPTLIPEEGLGADLMQRYS CCHHHHHCCCCHHHHHCCCCEEEECCCCCHHHHHHHCCCEECCCCCCCCCCCHHHHHHHH LGIDTYDMYCGHTSSLISVDVLSANRAFTKLIQSPSLRVKMGASGLKRAREMYDWSVIYK CCCCCHHECCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH QYDDLFNHLNLIRKSSVLNDFDKQRFWPGRVNPFQGFSDYATNQLSLNSKVSLVDDDFQI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCCEEEEECCCCEE TFQRYIDIKDLKMVSFASYILPTHEEVKCIFNNLSKAPMKACDLLIPFELKRRPFILRTL EEEHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHCEECCHHCCCCCHHHHHH VSLLKFNLIKLV HHHHHHHHHHCC >Mature Secondary Structure STNSTAIYYQSDAYTTSKQKLMGRNAAGESFLRAYFKYDNSHNLYVYPVSLEDLDCFKR CCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH KAIAYNRHEPIECITKRSLTKLVDVGNLFVPGPGLDQFAHERCFSGHNSWSLCGITHTTS HHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCC SINAMDCISSLATAPIQEWDALICTSNAVKKHVNETLNSQFEYLKYRLGISKLVLPQLPV CCHHHHHHHHHHHCCHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCE IPLGIHTSDFHFTDSEKFSSRNTLGIDDNSIVILYTGRLSFHAKAHPLAMYQALELSSKQ EEEEECCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCEEECCCCCHHHHHHHHHCCCCC TNIPIVLIECGWHANQSIADSFTEAAQRFCPSIKVLHLDGRINKNRSLAWSSADIFCSLP CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCCEEEECC DNIQETFGIVPIEAMAAGLPVVVSDWDGYKDTVRDEIDGFRIPTLIPEEGLGADLMQRYS CCHHHHHCCCCHHHHHCCCCEEEECCCCCHHHHHHHCCCEECCCCCCCCCCCHHHHHHHH LGIDTYDMYCGHTSSLISVDVLSANRAFTKLIQSPSLRVKMGASGLKRAREMYDWSVIYK CCCCCHHECCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH QYDDLFNHLNLIRKSSVLNDFDKQRFWPGRVNPFQGFSDYATNQLSLNSKVSLVDDDFQI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCCEEEEECCCCEE TFQRYIDIKDLKMVSFASYILPTHEEVKCIFNNLSKAPMKACDLLIPFELKRRPFILRTL EEEHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHCEECCHHCCCCCHHHHHH VSLLKFNLIKLV HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA