| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026802
Identifier: 124026802
GI number: 124026802
Start: 1741129
End: 1742310
Strand: Direct
Name: 124026802
Synonym: NATL1_20971
Alternate gene names: NA
Gene position: 1741129-1742310 (Clockwise)
Preceding gene: 124026801
Following gene: 124026803
Centisome position: 93.37
GC content: 29.1
Gene sequence:
>1182_bases ATGCTTACGTTTAATGATATAAAAAGTTCAGAGCTTATAATACACACAAGAAAAGTTCTTCTTAATAACGAAGGGGAGAC TATTAGTTACTATATAGATAAAATAGAAGGAACGCAATATCTAGATAAATATTATATAAATTCTGGAATATCGTACAAAG AGAGTAATTATATAACCCTTGATTCACGTTTACATTCTATTGAAGAAAAGAGTTTTTTACGATCAGTATTTAGGAGATTA GATGAAGAATTAGATCTTGATTTTTTTGAGATGTCTCATAATAATGGATCAGATATTGATATTTTTCATGTAAATAGTTC TTCAATTTTTGATACAAATACTATAGGCCAAGCAATAAAACAAGAGCATCAATCAGGAGCATGGTGGGAATTATTTTGGA AAGACAGTGACGAATTGAAAAAATTTGGATCTTTAGAAAAAAATACAATCATTCATGAAATCGGTCACGCATTAGGTTTA GCTCACCCTTTCAATGATCCTTTTAACAAAAATTACACGACTCAAGACACAATAATGTCTTACAATAGAGGTCCATCTGG ATGGAATGAATGGTTTTCTAGTATCGACTTGCTTGCTCTAAAAAGTATTTGGAAAAGAGAAGATGATTTAGGAATAATAG AATATGAAAACCCAAGTAACAGTTACAAGTTTATTCGTGAAAATAATGATTCATTATTTATAAAAAGTGAGATAGGTAAT GAGTTGATTGATGGCATACAAAATTTACATTTCAGTGATCAAATTCTCAACGTTAATGAAGACATACTCAGTGTATTCAA TGAACTCAAAGGAATTGACCATATTACAGGACAAATATATAGACTATATAATTCTGCTTTTGCAAGATTCCCTGATATAA ACGGTTTCAGATATTGGATAGAAATGAATGAATCTGAAAATAATACATACTATCAAACATCTGCTTCATTTATTAATTCA GCTGAATTTAAGAAATTGTATTTTAATGATCAATCGAACGAAGCATATATATACTCACTTTACAACAATATTTTTAAGAG AGAGCCTGATACTGATGGCTATGAATATTGGCTTGGACGAATTGAAGGTAACCACGAAAATAAAAATGATTTATTAATTG GATTTGCAGAATCCATGGAAAGCAAAGAGCTATTTATGAAAGAAACATCTTTAAAATTTTAA
Upstream 100 bases:
>100_bases ATAATATCGAGAGTCTGATAATTGAAATGATCGAAGAAGATAAAATAGACAAGAAATATAATTATAATTAAATTCTAAAA TTCATTAGAAATAATCATAA
Downstream 100 bases:
>100_bases TGTGACTTGTTACAATAAAATCTCTATCATTGCTTGTACGGCTAACCGCTCTTTACCCTGTCATCTCTTGAAATTAATAT TCCTGAAATAACAAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MLTFNDIKSSELIIHTRKVLLNNEGETISYYIDKIEGTQYLDKYYINSGISYKESNYITLDSRLHSIEEKSFLRSVFRRL DEELDLDFFEMSHNNGSDIDIFHVNSSSIFDTNTIGQAIKQEHQSGAWWELFWKDSDELKKFGSLEKNTIIHEIGHALGL AHPFNDPFNKNYTTQDTIMSYNRGPSGWNEWFSSIDLLALKSIWKREDDLGIIEYENPSNSYKFIRENNDSLFIKSEIGN ELIDGIQNLHFSDQILNVNEDILSVFNELKGIDHITGQIYRLYNSAFARFPDINGFRYWIEMNESENNTYYQTSASFINS AEFKKLYFNDQSNEAYIYSLYNNIFKREPDTDGYEYWLGRIEGNHENKNDLLIGFAESMESKELFMKETSLKF
Sequences:
>Translated_393_residues MLTFNDIKSSELIIHTRKVLLNNEGETISYYIDKIEGTQYLDKYYINSGISYKESNYITLDSRLHSIEEKSFLRSVFRRL DEELDLDFFEMSHNNGSDIDIFHVNSSSIFDTNTIGQAIKQEHQSGAWWELFWKDSDELKKFGSLEKNTIIHEIGHALGL AHPFNDPFNKNYTTQDTIMSYNRGPSGWNEWFSSIDLLALKSIWKREDDLGIIEYENPSNSYKFIRENNDSLFIKSEIGN ELIDGIQNLHFSDQILNVNEDILSVFNELKGIDHITGQIYRLYNSAFARFPDINGFRYWIEMNESENNTYYQTSASFINS AEFKKLYFNDQSNEAYIYSLYNNIFKREPDTDGYEYWLGRIEGNHENKNDLLIGFAESMESKELFMKETSLKF >Mature_393_residues MLTFNDIKSSELIIHTRKVLLNNEGETISYYIDKIEGTQYLDKYYINSGISYKESNYITLDSRLHSIEEKSFLRSVFRRL DEELDLDFFEMSHNNGSDIDIFHVNSSSIFDTNTIGQAIKQEHQSGAWWELFWKDSDELKKFGSLEKNTIIHEIGHALGL AHPFNDPFNKNYTTQDTIMSYNRGPSGWNEWFSSIDLLALKSIWKREDDLGIIEYENPSNSYKFIRENNDSLFIKSEIGN ELIDGIQNLHFSDQILNVNEDILSVFNELKGIDHITGQIYRLYNSAFARFPDINGFRYWIEMNESENNTYYQTSASFINS AEFKKLYFNDQSNEAYIYSLYNNIFKREPDTDGYEYWLGRIEGNHENKNDLLIGFAESMESKELFMKETSLKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46161; Mature: 46161
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTFNDIKSSELIIHTRKVLLNNEGETISYYIDKIEGTQYLDKYYINSGISYKESNYITL CCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEE DSRLHSIEEKSFLRSVFRRLDEELDLDFFEMSHNNGSDIDIFHVNSSSIFDTNTIGQAIK HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHH QEHQSGAWWELFWKDSDELKKFGSLEKNTIIHEIGHALGLAHPFNDPFNKNYTTQDTIMS HHHCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH YNRGPSGWNEWFSSIDLLALKSIWKREDDLGIIEYENPSNSYKFIRENNDSLFIKSEIGN CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCEEEEHHHCH ELIDGIQNLHFSDQILNVNEDILSVFNELKGIDHITGQIYRLYNSAFARFPDINGFRYWI HHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE EMNESENNTYYQTSASFINSAEFKKLYFNDQSNEAYIYSLYNNIFKREPDTDGYEYWLGR EECCCCCCEEEEEHHHHHCCHHHEEEEECCCCCCEEEEHHHHHHHHCCCCCCCHHEEEEE IEGNHENKNDLLIGFAESMESKELFMKETSLKF ECCCCCCCCCEEEEEHHCCCHHHHHHHHHCCCC >Mature Secondary Structure MLTFNDIKSSELIIHTRKVLLNNEGETISYYIDKIEGTQYLDKYYINSGISYKESNYITL CCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEE DSRLHSIEEKSFLRSVFRRLDEELDLDFFEMSHNNGSDIDIFHVNSSSIFDTNTIGQAIK HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHH QEHQSGAWWELFWKDSDELKKFGSLEKNTIIHEIGHALGLAHPFNDPFNKNYTTQDTIMS HHHCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH YNRGPSGWNEWFSSIDLLALKSIWKREDDLGIIEYENPSNSYKFIRENNDSLFIKSEIGN CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCEEEEHHHCH ELIDGIQNLHFSDQILNVNEDILSVFNELKGIDHITGQIYRLYNSAFARFPDINGFRYWI HHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE EMNESENNTYYQTSASFINSAEFKKLYFNDQSNEAYIYSLYNNIFKREPDTDGYEYWLGR EECCCCCCEEEEEHHHHHCCHHHEEEEECCCCCCEEEEHHHHHHHHCCCCCCCHHEEEEE IEGNHENKNDLLIGFAESMESKELFMKETSLKF ECCCCCCCCCEEEEEHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA