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The map label for this gene is rfbE [H]

Identifier: 124026799

GI number: 124026799

Start: 1735572

End: 1736948

Strand: Reverse

Name: rfbE [H]

Synonym: NATL1_20941

Alternate gene names: 124026799

Gene position: 1736948-1735572 (Counterclockwise)

Preceding gene: 124026800

Following gene: 124026798

Centisome position: 93.15

GC content: 30.72

Gene sequence:

>1377_bases
ATGATTAATATTGACGCAAATGAATTGCAAAAACTATATATCGCCTATTTTGGAAGACCTGGAGATCCATCTGGCATAAA
TTATTGGCTTTCACGTTCTAATCAATCACTTGATCTAACGGGAATATCAAATGAATTATCTATGCAAGATGAATATATTA
AATATACTTCTTATGATAAATCTTTTGATTTTAAGATTAACAAATTATATTTGAATTTATACAATAGAAAAGCTGATTTT
GATGGTTTAAATTATTGGATGAAGATGACTAATAGTAAGGAATATAAGATTTCAGATATTGTATATGAATTAGTTTTTTC
TTCTAGTAAGCCTTATTCGGTTGACTTAAAGCAAGAGAAAAAGGATAGTCATATTCTTCAAAATAAAATTTTTGCGGCAG
AACTATTTACTAAGCAAATTAGTAAAAGTATTACTTTAATTAATTTATATAAACCCGATTCAATATCTCCTTGGATTTCA
GGTAACTCATTTATAAGAGTATCTAATTTCTTCAGTCATATTAATGAGAAGACGGTCTCAATAGATCATATAAATAATTT
TATTGCTTCTTTATCTGACACTCCAGTAAGCATACTCAATGAGCCAGCTATAGAAATTAAAGATACTTCACTTTCTATTC
CTATTTATCAAACAGAAAATAGATCTTTTGCAAAAAAAATTACAAAAAATGTAATAAATATTACAGGTGGAGCTCTTAGG
AAGTCTAAAAATAAGACTAGTATTATTGCACTAAATAATATTAATTTGACAATCATGAAGGGAGAGAGAGTCGGACTGAT
TGGTCATAATGGGTCCGGAAAAAGTAGTTTTTTGAGGTTGATTTCAGGTATTTATATCCCCACGAGTGGAAATATAAATG
TTTTAGTAGATGTGTATCCTATGCTCCAAAAAACTTTTCTGACTAGTACAGAGCTATCTGGAATCGATGCTTGTAAAGCG
CATTATTTACTTAAAAACCATAGCCTTGATGGCTTTGAATCTTTCTTGAATGAAATAACAGAATTTTCGGGCCTTGGCTC
ATATATCTCTTTACCTATAAAAACTTACAGTGAGGGTATGTCTGCAAGGTTGGTTTTTTCAATTCTTACTTCAACTCCTC
ATGAATGTTTAGCAATAGATGAAGGTTTCGGTACTGGTGACGCAGACTTTTGTGATAGAGCTGAAGAAAGAATGAAACAA
TTTATGGAATCCGCCGCAACCTTATTTTTGGCTAGTCATTCGGAGGAACTTTTAAAACAGTTTTGTAATAGAGGTATTGT
TTTTAGCCATGGATCAATTGTATATGATGGCCCTTTAGATGCTGCCTTGAATTATTATCATACCCATGACTATTATCGTA
AAAATGTTGTTGGATAA

Upstream 100 bases:

>100_bases
TGATGGTAAACATGAGAAGAAATGTGATTTACTCTATGTTTATGTTTCAACCAGCTCAAAAGAAAGTAGAAGCATAAATT
AAAATTTTTAAATTAATAAT

Downstream 100 bases:

>100_bases
TTTTAAACTTGCTTTTAAAACTAGAAGAGCTTGGTGGTATACAGCTAGCTCTAGGTCAAGAGCTAGGTTTGCAAGAACTA
CATTAGGAAGTTTTTGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MINIDANELQKLYIAYFGRPGDPSGINYWLSRSNQSLDLTGISNELSMQDEYIKYTSYDKSFDFKINKLYLNLYNRKADF
DGLNYWMKMTNSKEYKISDIVYELVFSSSKPYSVDLKQEKKDSHILQNKIFAAELFTKQISKSITLINLYKPDSISPWIS
GNSFIRVSNFFSHINEKTVSIDHINNFIASLSDTPVSILNEPAIEIKDTSLSIPIYQTENRSFAKKITKNVINITGGALR
KSKNKTSIIALNNINLTIMKGERVGLIGHNGSGKSSFLRLISGIYIPTSGNINVLVDVYPMLQKTFLTSTELSGIDACKA
HYLLKNHSLDGFESFLNEITEFSGLGSYISLPIKTYSEGMSARLVFSILTSTPHECLAIDEGFGTGDADFCDRAEERMKQ
FMESAATLFLASHSEELLKQFCNRGIVFSHGSIVYDGPLDAALNYYHTHDYYRKNVVG

Sequences:

>Translated_458_residues
MINIDANELQKLYIAYFGRPGDPSGINYWLSRSNQSLDLTGISNELSMQDEYIKYTSYDKSFDFKINKLYLNLYNRKADF
DGLNYWMKMTNSKEYKISDIVYELVFSSSKPYSVDLKQEKKDSHILQNKIFAAELFTKQISKSITLINLYKPDSISPWIS
GNSFIRVSNFFSHINEKTVSIDHINNFIASLSDTPVSILNEPAIEIKDTSLSIPIYQTENRSFAKKITKNVINITGGALR
KSKNKTSIIALNNINLTIMKGERVGLIGHNGSGKSSFLRLISGIYIPTSGNINVLVDVYPMLQKTFLTSTELSGIDACKA
HYLLKNHSLDGFESFLNEITEFSGLGSYISLPIKTYSEGMSARLVFSILTSTPHECLAIDEGFGTGDADFCDRAEERMKQ
FMESAATLFLASHSEELLKQFCNRGIVFSHGSIVYDGPLDAALNYYHTHDYYRKNVVG
>Mature_458_residues
MINIDANELQKLYIAYFGRPGDPSGINYWLSRSNQSLDLTGISNELSMQDEYIKYTSYDKSFDFKINKLYLNLYNRKADF
DGLNYWMKMTNSKEYKISDIVYELVFSSSKPYSVDLKQEKKDSHILQNKIFAAELFTKQISKSITLINLYKPDSISPWIS
GNSFIRVSNFFSHINEKTVSIDHINNFIASLSDTPVSILNEPAIEIKDTSLSIPIYQTENRSFAKKITKNVINITGGALR
KSKNKTSIIALNNINLTIMKGERVGLIGHNGSGKSSFLRLISGIYIPTSGNINVLVDVYPMLQKTFLTSTELSGIDACKA
HYLLKNHSLDGFESFLNEITEFSGLGSYISLPIKTYSEGMSARLVFSILTSTPHECLAIDEGFGTGDADFCDRAEERMKQ
FMESAATLFLASHSEELLKQFCNRGIVFSHGSIVYDGPLDAALNYYHTHDYYRKNVVG

Specific function: May form an ATP-driven O-antigen export apparatus, in association with RfbD [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 51646; Mature: 51646

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIDANELQKLYIAYFGRPGDPSGINYWLSRSNQSLDLTGISNELSMQDEYIKYTSYDK
CCCCCHHHHHHHHHHEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHEEEECCCC
SFDFKINKLYLNLYNRKADFDGLNYWMKMTNSKEYKISDIVYELVFSSSKPYSVDLKQEK
CCCEEEEEEEEEEECCCCCCCHHHHHHEECCCCCEEHHHHHHHHHHCCCCCEEECCHHCC
KDSHILQNKIFAAELFTKQISKSITLINLYKPDSISPWISGNSFIRVSNFFSHINEKTVS
CHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCEEE
IDHINNFIASLSDTPVSILNEPAIEIKDTSLSIPIYQTENRSFAKKITKNVINITGGALR
HHHHHHHHHHCCCCCHHHHCCCCEEEECCEEEEEEEECCCHHHHHHHHHHHHHCCCHHHH
KSKNKTSIIALNNINLTIMKGERVGLIGHNGSGKSSFLRLISGIYIPTSGNINVLVDVYP
CCCCCEEEEEEECCEEEEEECCEEEEEECCCCCHHHHHHHHHCEEEECCCCCEEEEEEHH
MLQKTFLTSTELSGIDACKAHYLLKNHSLDGFESFLNEITEFSGLGSYISLPIKTYSEGM
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCC
SARLVFSILTSTPHECLAIDEGFGTGDADFCDRAEERMKQFMESAATLFLASHSEELLKQ
CHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHH
FCNRGIVFSHGSIVYDGPLDAALNYYHTHDYYRKNVVG
HHCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MINIDANELQKLYIAYFGRPGDPSGINYWLSRSNQSLDLTGISNELSMQDEYIKYTSYDK
CCCCCHHHHHHHHHHEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHEEEECCCC
SFDFKINKLYLNLYNRKADFDGLNYWMKMTNSKEYKISDIVYELVFSSSKPYSVDLKQEK
CCCEEEEEEEEEEECCCCCCCHHHHHHEECCCCCEEHHHHHHHHHHCCCCCEEECCHHCC
KDSHILQNKIFAAELFTKQISKSITLINLYKPDSISPWISGNSFIRVSNFFSHINEKTVS
CHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCEEE
IDHINNFIASLSDTPVSILNEPAIEIKDTSLSIPIYQTENRSFAKKITKNVINITGGALR
HHHHHHHHHHCCCCCHHHHCCCCEEEECCEEEEEEEECCCHHHHHHHHHHHHHCCCHHHH
KSKNKTSIIALNNINLTIMKGERVGLIGHNGSGKSSFLRLISGIYIPTSGNINVLVDVYP
CCCCCEEEEEEECCEEEEEECCEEEEEECCCCCHHHHHHHHHCEEEECCCCCEEEEEEHH
MLQKTFLTSTELSGIDACKAHYLLKNHSLDGFESFLNEITEFSGLGSYISLPIKTYSEGM
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCC
SARLVFSILTSTPHECLAIDEGFGTGDADFCDRAEERMKQFMESAATLFLASHSEELLKQ
CHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHH
FCNRGIVFSHGSIVYDGPLDAALNYYHTHDYYRKNVVG
HHCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7692217 [H]