| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026758
Identifier: 124026758
GI number: 124026758
Start: 1698105
End: 1698443
Strand: Reverse
Name: 124026758
Synonym: NATL1_20531
Alternate gene names: NA
Gene position: 1698443-1698105 (Counterclockwise)
Preceding gene: 124026760
Following gene: 124026757
Centisome position: 91.08
GC content: 43.07
Gene sequence:
>339_bases ATGGCCCAGCTTCACGATCTTCGCTTGCGATTGCTTGTTCAACAAGAGAGTGAGCAAATATCCAAATCCCAACCAAACGA TTTAGATTTATCAATTGTTCAAGCTAGATGCTTGTGTTGGTTAACACTTCTTGCTGAAGCGCATGAAGATCAAGCTAATG ATGCGGAAGGAAGAAGCGATACAGAACAAGCAATGGGTTGGTTCGCTGACTCAATGAGGTTACGAGATGTTATTCAAGTT GTTACTAGCATTGAAATACCTCTGCCTGAAAGCTCTGAATTAGATAACCATGAGGAAGGAGGTGGCTTTTTTAGCGGTGA GCCTCCTATGACGGCCTAA
Upstream 100 bases:
>100_bases TGCGAAAAACGAATAAAAACTAAAAATATGTAGGCCTATATGTGGTGGGTGTGCAAAATCATTACTCTCTCGCTAGCGTT GGTTTAGTGAATCAGTCAAC
Downstream 100 bases:
>100_bases TAAATGTAATGATGGTTTGTAAGCTGCCTCGATGAAGGTGTCTGAAGAACCATGCCAATGCCCAGATTGCCTAAGATTTT ACAGGGAACATGATCGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAQLHDLRLRLLVQQESEQISKSQPNDLDLSIVQARCLCWLTLLAEAHEDQANDAEGRSDTEQAMGWFADSMRLRDVIQV VTSIEIPLPESSELDNHEEGGGFFSGEPPMTA
Sequences:
>Translated_112_residues MAQLHDLRLRLLVQQESEQISKSQPNDLDLSIVQARCLCWLTLLAEAHEDQANDAEGRSDTEQAMGWFADSMRLRDVIQV VTSIEIPLPESSELDNHEEGGGFFSGEPPMTA >Mature_111_residues AQLHDLRLRLLVQQESEQISKSQPNDLDLSIVQARCLCWLTLLAEAHEDQANDAEGRSDTEQAMGWFADSMRLRDVIQVV TSIEIPLPESSELDNHEEGGGFFSGEPPMTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12509; Mature: 12378
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLHDLRLRLLVQQESEQISKSQPNDLDLSIVQARCLCWLTLLAEAHEDQANDAEGRSD CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH TEQAMGWFADSMRLRDVIQVVTSIEIPLPESSELDNHEEGGGFFSGEPPMTA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQLHDLRLRLLVQQESEQISKSQPNDLDLSIVQARCLCWLTLLAEAHEDQANDAEGRSD CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH TEQAMGWFADSMRLRDVIQVVTSIEIPLPESSELDNHEEGGGFFSGEPPMTA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA