| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is arcB [C]
Identifier: 124026730
GI number: 124026730
Start: 1669758
End: 1671143
Strand: Reverse
Name: arcB [C]
Synonym: NATL1_20251
Alternate gene names: 124026730
Gene position: 1671143-1669758 (Counterclockwise)
Preceding gene: 124026731
Following gene: 124026729
Centisome position: 89.62
GC content: 38.38
Gene sequence:
>1386_bases GTGAGCACGCCTCTAGTAACTATTAAAGCCTTACAAAGAAGAATGGCTGAGGGTGTTCCTCATGCCACAAGCAGTGAATC CGCAGTAAGGAGAATGTGGTGGGCAGCTCTTGATACTCTTCAGTCAGACATTTTGTTGCCAATGAACCTTACAAGAGGTT TGTGGTTATCTGCACCGTTGCCTGCACTCTACGAACCTAAATTACTCAAGAAATTTCAAGGATGGGTGTGGGCACCAAAG GACTTGTTAAATATTTCAAACCCTTCTATGGGGATGCTGCCTCCAAGTAAATCGGCTTCGATGGATTTCCACAATGATTC TGCAAGCTATGAGCGCTTGTCTCTTCTTGAGGAAGATGGAAATGATCCATTACTAATAGTTATTACTCCTGAAATTCAAA TAGCTTTGGCTCTGGAAGGTAAATCGAATGAGAGAAAATTATTAATGCGAAGTGATCCCGAGACTCTAAGTGATCTTTTG ACACTACTTGATAATAGATTGAATACAGAAAATGTTGAACAAGCAAATAATCTGCGAAATGCACTTGGAGAGATGGGACA GCTAAAAACAAATGATGATTTATCTAAAGTATTTTGGCCTCTATTATCTCAACGTCTAGCAGACATTGCACCAAGTCTAA ATATTCAAACTTTGCCAGACAATTTAATTAATGATCACAAATCTAGTTCAAAAAATAGTGAAATTTCCTTGCTAGAGGCA TTAACTCATGAAATCAGAACTCCGTTGGCGACAATAAGAACCCTAATAAGATCTCTTTTAAGAAAGCAAGATTTACCTCA AGTAGTTGAAACGCGTTTGAAGCAAATAGATATTGAATGTACGGAACAAATTGATCGTTTTGGTTTGATTTTTAATGCAG TGGAGCTAGAGAGAAGCAAGCCTAAACAAACAAATTTAGCTTTAACCGATTTAGGGCAAATGCTCACAATGCTTTCTCCC GTGTGGAGAAGTCAGTTAGAGCGAAAAGGCTTGACACTTATTCTTGATATCACACAGGATTTACCAAAAGTTTTGAGTGA CTCAGAAGGACTTGAATTAATGTTGACAGGTCTTATTGACAGAAACAGTCGTGGATTACAAGTGGGTGGAGAATTAACTT TGAAATTAAGGCCAGCTGGACAGAGACTAAAGCTTCAGATTTTAACTCATCTTACAGCTACTACTCATTCTGGATTATCA GAAAGTGTTTCCAATGAAGAAATTGGACCAGTACTCAGTTGGAATCCAGCTACAGGTAATTTGCAACTTAGTCAGGCTGC AACACAAAGACTTTTGAAAAGCCTTGGTGGACGTCTTACAAATAGGCGAGACAGTGGAATGACGATATTTTTTCCTGTTT CTGAATCAAAAGAACTTGATCTTTAA
Upstream 100 bases:
>100_bases AAACCTCACGAGTTTTAACTCTACATTTTATGCTTTTTCATCCTTTAAAATCTAATCAATCAAATGGATTTAAAGGTTTG CATGAGGTTTTTAGGTTCTC
Downstream 100 bases:
>100_bases GGTTAATGTTGACGCGTGTGAAGTTGACGTCTAATGAGTCAAAAGGCACAAAATAAAGTGCTAATTTAAAAATATAAAGA AAAGTTGATCTAATTGAAAG
Product: Signal transduction histidine kinase
Products: NA
Alternate protein names: Two-Component Sensor Histidine Kinase; Sensor Histidine Kinase; Signal Transduction Histidine Kinase; Histidine Kinase A Domain Protein; Two Component System Sensor Histidine Kinase; Sensory Transduction Histidine Kinase
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MSTPLVTIKALQRRMAEGVPHATSSESAVRRMWWAALDTLQSDILLPMNLTRGLWLSAPLPALYEPKLLKKFQGWVWAPK DLLNISNPSMGMLPPSKSASMDFHNDSASYERLSLLEEDGNDPLLIVITPEIQIALALEGKSNERKLLMRSDPETLSDLL TLLDNRLNTENVEQANNLRNALGEMGQLKTNDDLSKVFWPLLSQRLADIAPSLNIQTLPDNLINDHKSSSKNSEISLLEA LTHEIRTPLATIRTLIRSLLRKQDLPQVVETRLKQIDIECTEQIDRFGLIFNAVELERSKPKQTNLALTDLGQMLTMLSP VWRSQLERKGLTLILDITQDLPKVLSDSEGLELMLTGLIDRNSRGLQVGGELTLKLRPAGQRLKLQILTHLTATTHSGLS ESVSNEEIGPVLSWNPATGNLQLSQAATQRLLKSLGGRLTNRRDSGMTIFFPVSESKELDL
Sequences:
>Translated_461_residues MSTPLVTIKALQRRMAEGVPHATSSESAVRRMWWAALDTLQSDILLPMNLTRGLWLSAPLPALYEPKLLKKFQGWVWAPK DLLNISNPSMGMLPPSKSASMDFHNDSASYERLSLLEEDGNDPLLIVITPEIQIALALEGKSNERKLLMRSDPETLSDLL TLLDNRLNTENVEQANNLRNALGEMGQLKTNDDLSKVFWPLLSQRLADIAPSLNIQTLPDNLINDHKSSSKNSEISLLEA LTHEIRTPLATIRTLIRSLLRKQDLPQVVETRLKQIDIECTEQIDRFGLIFNAVELERSKPKQTNLALTDLGQMLTMLSP VWRSQLERKGLTLILDITQDLPKVLSDSEGLELMLTGLIDRNSRGLQVGGELTLKLRPAGQRLKLQILTHLTATTHSGLS ESVSNEEIGPVLSWNPATGNLQLSQAATQRLLKSLGGRLTNRRDSGMTIFFPVSESKELDL >Mature_460_residues STPLVTIKALQRRMAEGVPHATSSESAVRRMWWAALDTLQSDILLPMNLTRGLWLSAPLPALYEPKLLKKFQGWVWAPKD LLNISNPSMGMLPPSKSASMDFHNDSASYERLSLLEEDGNDPLLIVITPEIQIALALEGKSNERKLLMRSDPETLSDLLT LLDNRLNTENVEQANNLRNALGEMGQLKTNDDLSKVFWPLLSQRLADIAPSLNIQTLPDNLINDHKSSSKNSEISLLEAL THEIRTPLATIRTLIRSLLRKQDLPQVVETRLKQIDIECTEQIDRFGLIFNAVELERSKPKQTNLALTDLGQMLTMLSPV WRSQLERKGLTLILDITQDLPKVLSDSEGLELMLTGLIDRNSRGLQVGGELTLKLRPAGQRLKLQILTHLTATTHSGLSE SVSNEEIGPVLSWNPATGNLQLSQAATQRLLKSLGGRLTNRRDSGMTIFFPVSESKELDL
Specific function: Member Of The Two-Component Regulatory System Arcb/Arca. Sensor-Regulator Protein For Anaerobic Repression Of The Arc Modulon. Activates Arca Via A Four-Step Phosphorelay. Arcb Can Also Dephosphorylate Arca By A Reverse Phosphorelay Involving His- 717 And
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 51399; Mature: 51268
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPLVTIKALQRRMAEGVPHATSSESAVRRMWWAALDTLQSDILLPMNLTRGLWLSAPL CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCC PALYEPKLLKKFQGWVWAPKDLLNISNPSMGMLPPSKSASMDFHNDSASYERLSLLEEDG CCCCCCHHHHHHCCCEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC NDPLLIVITPEIQIALALEGKSNERKLLMRSDPETLSDLLTLLDNRLNTENVEQANNLRN CCCEEEEECCCEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH ALGEMGQLKTNDDLSKVFWPLLSQRLADIAPSLNIQTLPDNLINDHKSSSKNSEISLLEA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHCCCCCCCCCHHHHHHH LTHEIRTPLATIRTLIRSLLRKQDLPQVVETRLKQIDIECTEQIDRFGLIFNAVELERSK HHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC PKQTNLALTDLGQMLTMLSPVWRSQLERKGLTLILDITQDLPKVLSDSEGLELMLTGLID CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCEEEEEHHHC RNSRGLQVGGELTLKLRPAGQRLKLQILTHLTATTHSGLSESVSNEEIGPVLSWNPATGN CCCCCEEECCEEEEEECCCCCCEEHHHHHHHHHHHHCCHHHHCCCCCCCCEEECCCCCCC LQLSQAATQRLLKSLGGRLTNRRDSGMTIFFPVSESKELDL EEHHHHHHHHHHHHHCCHHCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure STPLVTIKALQRRMAEGVPHATSSESAVRRMWWAALDTLQSDILLPMNLTRGLWLSAPL CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCC PALYEPKLLKKFQGWVWAPKDLLNISNPSMGMLPPSKSASMDFHNDSASYERLSLLEEDG CCCCCCHHHHHHCCCEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC NDPLLIVITPEIQIALALEGKSNERKLLMRSDPETLSDLLTLLDNRLNTENVEQANNLRN CCCEEEEECCCEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH ALGEMGQLKTNDDLSKVFWPLLSQRLADIAPSLNIQTLPDNLINDHKSSSKNSEISLLEA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHCCCCCCCCCHHHHHHH LTHEIRTPLATIRTLIRSLLRKQDLPQVVETRLKQIDIECTEQIDRFGLIFNAVELERSK HHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC PKQTNLALTDLGQMLTMLSPVWRSQLERKGLTLILDITQDLPKVLSDSEGLELMLTGLID CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCEEEEEHHHC RNSRGLQVGGELTLKLRPAGQRLKLQILTHLTATTHSGLSESVSNEEIGPVLSWNPATGN CCCCCEEECCEEEEEECCCCCCEEHHHHHHHHHHHHCCHHHHCCCCCCCCEEECCCCCCC LQLSQAATQRLLKSLGGRLTNRRDSGMTIFFPVSESKELDL EEHHHHHHHHHHHHHCCHHCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA