| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026671
Identifier: 124026671
GI number: 124026671
Start: 1623054
End: 1623617
Strand: Reverse
Name: 124026671
Synonym: NATL1_19661
Alternate gene names: NA
Gene position: 1623617-1623054 (Counterclockwise)
Preceding gene: 124026672
Following gene: 124026670
Centisome position: 87.07
GC content: 25.35
Gene sequence:
>564_bases GTGCTTAAAGAAAGAATCCAAGAGGTTTTTGAGTTCACTAAAAGTGAGTCTCCCTATAGGAAAGCTAATAAAGGGTGGAT TAATCAAGATATATTTTTAGATTTAAGTCCCTCTACTGATACAAACAAACAAACAAGTGAGGCTGCTAAAGTAACACTAT TTTGGTCTCCACTAAAAAGTTTATTATCGAATATTTTTCTGATTATTATTCTAGGTTCAATACTAGTATTTATCTCAGTA TCTTTTGTAAAAGGTAGATTTGATATTAATTTATTTAATAATTCTGACATTAACGATATTGTAAAAGTTGATCAAAATAA AGCTCCAGATATAACTATTTTAAAGGATATAGATTCTATAAATTCAACAATCCAAAAAAATATTGAGACAAAAGACTTAG CTAAATCAACTGAAATAAGTTCATTAGATGATAATTTTAAGAAAGCTGATGAAAAAGCAATAAATAAAAAAATTGATAAA CAAGATAATGCAATAAAAGAAAGTGAAGGGAATAAAGATATTAAAAGCTTACAAAATAAAAAACCAAAATCAAATTTTAT TTGA
Upstream 100 bases:
>100_bases GCTGGGTAATTCAATTTCACGAATATCTATATAAAAGCAACTTTTTTATTCTGACTTTCTGCTATGTTTTCGTTCCTGTA GTTTTAGGTAAACCTAACCT
Downstream 100 bases:
>100_bases ACTATTTTTTCGTATTAATGAAAATTCTTTGGTTTTTTAAAAATTGTTTTATCAGTTAAACTTTTTTTGTTTTTTGGCAG AGTTAGATGCTTTAATCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLKERIQEVFEFTKSESPYRKANKGWINQDIFLDLSPSTDTNKQTSEAAKVTLFWSPLKSLLSNIFLIIILGSILVFISV SFVKGRFDINLFNNSDINDIVKVDQNKAPDITILKDIDSINSTIQKNIETKDLAKSTEISSLDDNFKKADEKAINKKIDK QDNAIKESEGNKDIKSLQNKKPKSNFI
Sequences:
>Translated_187_residues MLKERIQEVFEFTKSESPYRKANKGWINQDIFLDLSPSTDTNKQTSEAAKVTLFWSPLKSLLSNIFLIIILGSILVFISV SFVKGRFDINLFNNSDINDIVKVDQNKAPDITILKDIDSINSTIQKNIETKDLAKSTEISSLDDNFKKADEKAINKKIDK QDNAIKESEGNKDIKSLQNKKPKSNFI >Mature_187_residues MLKERIQEVFEFTKSESPYRKANKGWINQDIFLDLSPSTDTNKQTSEAAKVTLFWSPLKSLLSNIFLIIILGSILVFISV SFVKGRFDINLFNNSDINDIVKVDQNKAPDITILKDIDSINSTIQKNIETKDLAKSTEISSLDDNFKKADEKAINKKIDK QDNAIKESEGNKDIKSLQNKKPKSNFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21230; Mature: 21230
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKERIQEVFEFTKSESPYRKANKGWINQDIFLDLSPSTDTNKQTSEAAKVTLFWSPLKS CCHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHEEEEHHHHHHH LLSNIFLIIILGSILVFISVSFVKGRFDINLFNNSDINDIVKVDQNKAPDITILKDIDSI HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHCCCCCCCCEEEEHHHHHH NSTIQKNIETKDLAKSTEISSLDDNFKKADEKAINKKIDKQDNAIKESEGNKDIKSLQNK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHCCCCHHHHHHHCC KPKSNFI CCCCCCC >Mature Secondary Structure MLKERIQEVFEFTKSESPYRKANKGWINQDIFLDLSPSTDTNKQTSEAAKVTLFWSPLKS CCHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHEEEEHHHHHHH LLSNIFLIIILGSILVFISVSFVKGRFDINLFNNSDINDIVKVDQNKAPDITILKDIDSI HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHCCCCCCCCEEEEHHHHHH NSTIQKNIETKDLAKSTEISSLDDNFKKADEKAINKKIDKQDNAIKESEGNKDIKSLQNK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHCCCCHHHHHHHCC KPKSNFI CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA