| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is psaA
Identifier: 124026662
GI number: 124026662
Start: 1613778
End: 1616084
Strand: Direct
Name: psaA
Synonym: NATL1_19571
Alternate gene names: 124026662
Gene position: 1613778-1616084 (Clockwise)
Preceding gene: 124026659
Following gene: 124026663
Centisome position: 86.54
GC content: 41.61
Gene sequence:
>2307_bases ATGACCATTAGCCCACCAGAAAAAGAACAAAAAAAAGAACCGGTTCTCGATAAACCTATCGAAACTGATGCAATCCCTGT AGATTTTTCCAAGCTTGATAAGCCTGGTTTTTGGTCAAAATCCCTTGCTAAAGGGCCAAAGACTACTACATGGATTTGGA ATCTTCATGCTGATGCGCATGATTTTGATACTCATGTTGGAGATCTCCAAGAAACCAGTAGAAAAGTATTTTCTGCTCAT TTTGGACATCTAGCAGTCATCTTTATTTGGATGAGTGCAGCTTTTTTCCATGGAGCTCGCTTTTCTAATTATTCTGGATG GCTCTCTGATCCAACTCATGTCAAGCCAGGAGCACAAGTTGTTTGGCCAATAGTTGGTCAGGAGATGCTTAATGCGGATT TAGGCGGTAATTATCACGGTATTCAGATCACTTCTGGAATTTTTCAGATGTGGAGAGGCTGGGGAATTACCAATGAAACC GAGCTCATGGCTTTAGCTATTGGTGCACTACTAATGGCAGCAATAATGTTGCACGGTGGCATATATCACTATCACAAAGC TGCTCCCAAGCTTGATTGGTTTAGAAATCTCGAGTCTATGCTCAATCACCACATAGCTGGTCTAGTGGGATTGGGTTCGA TTGCTTGGGCTGGACATTGCATTCACATTGGTGCACCTACAGCAGCACTCATGGATGCAATTGATGCAGGAAAGCCTCTG ATTATTGATGGAATTCCAATTGCTTCGATTGCGGACATGCCTCTGCCCCACGAGCTTTGCAATCCTGCTATTGCTAGTCA AATATTCCCTGGCCTCGCTGGAAGAACAGTTGAAAATTTCTTTACGACTAATTGGTGGGCGTTTAGTGATTTCCTAACTT TCAAAGGTGGTCTAAATCCAGTTACTGGTAGCTTATGGATGACAGATATTTCTCATCATCATTTAGCTTTTGGAGTGCTA GCTGTATTGGGCGGTCATCTATATAGAACAATGTTTGGCATTGGCCATAGCCTGAAAGAAATACTAGATAATCATGCTGG AGATCCAATTCTTTTCCCTGCTCCAAATGGTCACAAAGGGATTTATGAGTTTTTAGCTAATAGTTGGCATGCTCAGCTTG GTTTAAACCTTGCAATGATTGGCTCCTTGAGCATCATCATTTCCCATCACATGTATGCGATGCCCCCATATCCTTACTTG TCGATTGATTACCCAACTGTCCTAGGTCTATTCACTCACCACATGTGGATAGGAGGATTATTCATTGTTGGTGCAGCAGC TCATGCTGGTATTGCAATGATTAGAGACTATGACCCAGCTGTTCATATTGATAACGTTCTAGACAGAATCTTGAAAGCAA GAGATGCATTAATTAGTCATCTTAATTGGGCTTGTATGTTCTTAGGTTTCCATAGTTTTGGTCTTTATATTCATAACGAT GTAATGCGTGCATTAGGAAGGCCTGCAGATATGTTCAGTGATACAGGGATCCAACTTCAACCTGTTTTTGCTCAGTGGAT TCAAAATATTCATAATTCAGCAGCTGGTTCTACCACTCTTGCTGGTGCAAACGTAAACCTTCAACCTGGATTAGTTAGTG AAGTTTTTAATGGTTCCGTAAGTCAAGTTGGAGGAAAAATTGGAATCGCTCCTATACCTTTAGGAACTGCTGATTTCATG ATTCACCATATCCATGCTTTTACTATCCACGTAACCCTTCTGATTCTTCTAAAAGGAGTTTTATTCGCAAGGAGCTCCAG ATTAATTCCTGACAAAGCGAATCTTGGATTTAGATTCCCATGTGATGGACCAGGAAGAGGAGGTACATGCCAAGTTTCAT CTTGGGATCATGTTTTCCTTGGATTGTTCTGGATGTATAACGGCTTATCAGTAGTTATCTTCCACTTCTCATGGAAGATG CAAAGTGATGTATGGGGTCTAACAGGAGGAAACTTTGCTCAAAGTTCCATAACTATCAATGGATGGCTTAGAGATTTCCT ATGGGCTCAGTCATCTCAGGTCCTAACAAGTTATGGTCAACCTATAAGCATGTACGGTTTGATGTTCTTAGGAGCTCATT TCGTTTGGGCATTTAGTCTTATGTTCCTATTTAGTGGACGTGGTTACTGGCAAGAGTTATTTGAGTCAATCATTTGGGCT CATAATAAACTTAACTTGGCTCCAACCATCCAACCAAGGGCTTTATCTATTACTCAAGGTCGCGCAGTAGGAGCAGCTCA TTTCCTTCTTGGAGGAATTGCTACAACTTGGGCCTTCTTCCATGCTCGCTTAATTGGTCTCGGCTGA
Upstream 100 bases:
>100_bases AATTTCACTTCATAAGTAAAATTACTTGCTAAAGATTTCACCCTAGTCTTTCCAAGATTAGGCCCCCAAACCTCGATCAC ATTCCTGAAGGAATCACTCG
Downstream 100 bases:
>100_bases CCCTCTCTGATTTTTTATAAAATAATGGCAACTAAATTTCCATCTTTTAGTCAGGGTCTTGCTCAAGACCCTACAACCAG AAGAATCTGGTACGGCATAG
Product: photosystem I P700 chlorophyll a apoprotein A1
Products: NA
Alternate protein names: PsaA
Number of amino acids: Translated: 768; Mature: 767
Protein sequence:
>768_residues MTISPPEKEQKKEPVLDKPIETDAIPVDFSKLDKPGFWSKSLAKGPKTTTWIWNLHADAHDFDTHVGDLQETSRKVFSAH FGHLAVIFIWMSAAFFHGARFSNYSGWLSDPTHVKPGAQVVWPIVGQEMLNADLGGNYHGIQITSGIFQMWRGWGITNET ELMALAIGALLMAAIMLHGGIYHYHKAAPKLDWFRNLESMLNHHIAGLVGLGSIAWAGHCIHIGAPTAALMDAIDAGKPL IIDGIPIASIADMPLPHELCNPAIASQIFPGLAGRTVENFFTTNWWAFSDFLTFKGGLNPVTGSLWMTDISHHHLAFGVL AVLGGHLYRTMFGIGHSLKEILDNHAGDPILFPAPNGHKGIYEFLANSWHAQLGLNLAMIGSLSIIISHHMYAMPPYPYL SIDYPTVLGLFTHHMWIGGLFIVGAAAHAGIAMIRDYDPAVHIDNVLDRILKARDALISHLNWACMFLGFHSFGLYIHND VMRALGRPADMFSDTGIQLQPVFAQWIQNIHNSAAGSTTLAGANVNLQPGLVSEVFNGSVSQVGGKIGIAPIPLGTADFM IHHIHAFTIHVTLLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSSWDHVFLGLFWMYNGLSVVIFHFSWKM QSDVWGLTGGNFAQSSITINGWLRDFLWAQSSQVLTSYGQPISMYGLMFLGAHFVWAFSLMFLFSGRGYWQELFESIIWA HNKLNLAPTIQPRALSITQGRAVGAAHFLLGGIATTWAFFHARLIGLG
Sequences:
>Translated_768_residues MTISPPEKEQKKEPVLDKPIETDAIPVDFSKLDKPGFWSKSLAKGPKTTTWIWNLHADAHDFDTHVGDLQETSRKVFSAH FGHLAVIFIWMSAAFFHGARFSNYSGWLSDPTHVKPGAQVVWPIVGQEMLNADLGGNYHGIQITSGIFQMWRGWGITNET ELMALAIGALLMAAIMLHGGIYHYHKAAPKLDWFRNLESMLNHHIAGLVGLGSIAWAGHCIHIGAPTAALMDAIDAGKPL IIDGIPIASIADMPLPHELCNPAIASQIFPGLAGRTVENFFTTNWWAFSDFLTFKGGLNPVTGSLWMTDISHHHLAFGVL AVLGGHLYRTMFGIGHSLKEILDNHAGDPILFPAPNGHKGIYEFLANSWHAQLGLNLAMIGSLSIIISHHMYAMPPYPYL SIDYPTVLGLFTHHMWIGGLFIVGAAAHAGIAMIRDYDPAVHIDNVLDRILKARDALISHLNWACMFLGFHSFGLYIHND VMRALGRPADMFSDTGIQLQPVFAQWIQNIHNSAAGSTTLAGANVNLQPGLVSEVFNGSVSQVGGKIGIAPIPLGTADFM IHHIHAFTIHVTLLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSSWDHVFLGLFWMYNGLSVVIFHFSWKM QSDVWGLTGGNFAQSSITINGWLRDFLWAQSSQVLTSYGQPISMYGLMFLGAHFVWAFSLMFLFSGRGYWQELFESIIWA HNKLNLAPTIQPRALSITQGRAVGAAHFLLGGIATTWAFFHARLIGLG >Mature_767_residues TISPPEKEQKKEPVLDKPIETDAIPVDFSKLDKPGFWSKSLAKGPKTTTWIWNLHADAHDFDTHVGDLQETSRKVFSAHF GHLAVIFIWMSAAFFHGARFSNYSGWLSDPTHVKPGAQVVWPIVGQEMLNADLGGNYHGIQITSGIFQMWRGWGITNETE LMALAIGALLMAAIMLHGGIYHYHKAAPKLDWFRNLESMLNHHIAGLVGLGSIAWAGHCIHIGAPTAALMDAIDAGKPLI IDGIPIASIADMPLPHELCNPAIASQIFPGLAGRTVENFFTTNWWAFSDFLTFKGGLNPVTGSLWMTDISHHHLAFGVLA VLGGHLYRTMFGIGHSLKEILDNHAGDPILFPAPNGHKGIYEFLANSWHAQLGLNLAMIGSLSIIISHHMYAMPPYPYLS IDYPTVLGLFTHHMWIGGLFIVGAAAHAGIAMIRDYDPAVHIDNVLDRILKARDALISHLNWACMFLGFHSFGLYIHNDV MRALGRPADMFSDTGIQLQPVFAQWIQNIHNSAAGSTTLAGANVNLQPGLVSEVFNGSVSQVGGKIGIAPIPLGTADFMI HHIHAFTIHVTLLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSSWDHVFLGLFWMYNGLSVVIFHFSWKMQ SDVWGLTGGNFAQSSITINGWLRDFLWAQSSQVLTSYGQPISMYGLMFLGAHFVWAFSLMFLFSGRGYWQELFESIIWAH NKLNLAPTIQPRALSITQGRAVGAAHFLLGGIATTWAFFHARLIGLG
Specific function: PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which tran
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaA/psaB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAA_PROM1 (A2C4V3)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001015777.1 - ProteinModelPortal: A2C4V3 - SMR: A2C4V3 - STRING: A2C4V3 - GeneID: 4779260 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_19571 - eggNOG: NOG05023 - HOGENOM: HBG284930 - OMA: FSAHFGH - ProtClustDB: PRK13200 - BioCyc: PMAR167555:NATL1_19571-MONOMER - GO: GO:0015979 - GO: GO:0006810 - HAMAP: MF_00458 - InterPro: IPR006243 - InterPro: IPR001280 - InterPro: IPR020586 - Gene3D: G3DSA:1.20.1130.10 - PIRSF: PIRSF002905 - PRINTS: PR00257 - TIGRFAMs: TIGR01335
Pfam domain/function: PF00223 PsaA_PsaB
EC number: NA
Molecular weight: Translated: 84391; Mature: 84259
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS00419 PHOTOSYSTEM_I_PSAAB
Important sites: BINDING 709-709 BINDING 710-710
Signals:
None
Transmembrane regions:
HASH(0x91f9ed4)-; HASH(0xd53dddc)-; HASH(0xd5426d8)-; HASH(0xd5683e8)-; HASH(0xd3ba11c)-; HASH(0x946bcdc)-; HASH(0xd4af390)-; HASH(0xd3c1c70)-; HASH(0xd5f28d0)-; HASH(0xd5f5018)-; HASH(0xd3c2918)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISPPEKEQKKEPVLDKPIETDAIPVDFSKLDKPGFWSKSLAKGPKTTTWIWNLHADAH CCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCEEEEEEECCCCC DFDTHVGDLQETSRKVFSAHFGHLAVIFIWMSAAFFHGARFSNYSGWLSDPTHVKPGAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE VWPIVGQEMLNADLGGNYHGIQITSGIFQMWRGWGITNETELMALAIGALLMAAIMLHGG EHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC IYHYHKAAPKLDWFRNLESMLNHHIAGLVGLGSIAWAGHCIHIGAPTAALMDAIDAGKPL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHHHHHCCCCCE IIDGIPIASIADMPLPHELCNPAIASQIFPGLAGRTVENFFTTNWWAFSDFLTFKGGLNP EEECCCHHHHCCCCCCHHHHCHHHHHHHCCCCCCCHHHHHHCCCCEEHHHHHHHCCCCCC VTGSLWMTDISHHHLAFGVLAVLGGHLYRTMFGIGHSLKEILDNHAGDPILFPAPNGHKG CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHH IYEFLANSWHAQLGLNLAMIGSLSIIISHHMYAMPPYPYLSIDYPTVLGLFTHHMWIGGL HHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHEECCCCCEEEECHHHHHHHHHHHHHHHHH FIVGAAAHAGIAMIRDYDPAVHIDNVLDRILKARDALISHLNWACMFLGFHSFGLYIHND HHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMRALGRPADMFSDTGIQLQPVFAQWIQNIHNSAAGSTTLAGANVNLQPGLVSEVFNGSV HHHHHCCCHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHCCCH SQVGGKIGIAPIPLGTADFMIHHIHAFTIHVTLLILLKGVLFARSSRLIPDKANLGFRFP HHCCCEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECC CDGPGRGGTCQVSSWDHVFLGLFWMYNGLSVVIFHFSWKMQSDVWGLTGGNFAQSSITIN CCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEH GWLRDFLWAQSSQVLTSYGQPISMYGLMFLGAHFVWAFSLMFLFSGRGYWQELFESIIWA HHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HNKLNLAPTIQPRALSITQGRAVGAAHFLLGGIATTWAFFHARLIGLG CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure TISPPEKEQKKEPVLDKPIETDAIPVDFSKLDKPGFWSKSLAKGPKTTTWIWNLHADAH CCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCEEEEEEECCCCC DFDTHVGDLQETSRKVFSAHFGHLAVIFIWMSAAFFHGARFSNYSGWLSDPTHVKPGAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE VWPIVGQEMLNADLGGNYHGIQITSGIFQMWRGWGITNETELMALAIGALLMAAIMLHGG EHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC IYHYHKAAPKLDWFRNLESMLNHHIAGLVGLGSIAWAGHCIHIGAPTAALMDAIDAGKPL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHHHHHCCCCCE IIDGIPIASIADMPLPHELCNPAIASQIFPGLAGRTVENFFTTNWWAFSDFLTFKGGLNP EEECCCHHHHCCCCCCHHHHCHHHHHHHCCCCCCCHHHHHHCCCCEEHHHHHHHCCCCCC VTGSLWMTDISHHHLAFGVLAVLGGHLYRTMFGIGHSLKEILDNHAGDPILFPAPNGHKG CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHH IYEFLANSWHAQLGLNLAMIGSLSIIISHHMYAMPPYPYLSIDYPTVLGLFTHHMWIGGL HHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHEECCCCCEEEECHHHHHHHHHHHHHHHHH FIVGAAAHAGIAMIRDYDPAVHIDNVLDRILKARDALISHLNWACMFLGFHSFGLYIHND HHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMRALGRPADMFSDTGIQLQPVFAQWIQNIHNSAAGSTTLAGANVNLQPGLVSEVFNGSV HHHHHCCCHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHCCCH SQVGGKIGIAPIPLGTADFMIHHIHAFTIHVTLLILLKGVLFARSSRLIPDKANLGFRFP HHCCCEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECC CDGPGRGGTCQVSSWDHVFLGLFWMYNGLSVVIFHFSWKMQSDVWGLTGGNFAQSSITIN CCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEH GWLRDFLWAQSSQVLTSYGQPISMYGLMFLGAHFVWAFSLMFLFSGRGYWQELFESIIWA HHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HNKLNLAPTIQPRALSITQGRAVGAAHFLLGGIATTWAFFHARLIGLG CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA