| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026616
Identifier: 124026616
GI number: 124026616
Start: 1572225
End: 1572854
Strand: Direct
Name: 124026616
Synonym: NATL1_19111
Alternate gene names: NA
Gene position: 1572225-1572854 (Clockwise)
Preceding gene: 124026615
Following gene: 124026618
Centisome position: 84.31
GC content: 40.32
Gene sequence:
>630_bases ATGAATTTAATAGCTAGTTATAGAAATAAAGGTTTTGAATCTGTTGCAGATGGTGTGATGTCATTTTTCGATCGTCGCAC AGACTTGCATCGCAATGGAATCGCCTTCAGCAATGGATCAAATAATGATTCAGATCCTGCAAAAATTTCTACTGATATCA GCCTTGTAGCCATAGATCGCAGCGACCCAGAAGCATTTGCACTCTCTGAGGTCATTGTAAGAGGCGTCGATGCTGGGCTT CAAAAATACCTCCAAGATCGTCCTCTTTTTAGTAAATGCTCCCCAGAACAATCACTATTTGTCAATCCAATTTTCAACAT ACAACGTTACGCCCCTGGAGAAGGATTTAAAAAATGGCATTGTGACTGGACGATTAGCGAAGAAGCAACCGAACCGGTTC ATAGAGTTTTAGCTTGGATTCTCTATTGCAATGATGTCGAATCTGGAGGTACAGAATTCCACTGGCAGGAATATCATGAG ACAGCTGAGCGAGGAAAATTAGTTATTTTCCCTGCTGGATTGACACATATTCATAGAGGAAGAGTTAACAAAATTCATTC AAAAACAATTGCAACTGGTTGGATAAATGCAGGTTCAAGAGACTCATACATTTCCAGGCTGGCAAGTTAA
Upstream 100 bases:
>100_bases CCAACTAAAAGAGGGTAAAAGTCCCTATAGGATTTTTATCGAATTAGCACTTTCAATGGATTGAAAGTATCCAGAGATCG AAAAACCCTTAAAAAATCCC
Downstream 100 bases:
>100_bases TTAATAGAAAAATATTCTTACACAATTATTTTTTCAAGGTAGAGACAAGATTTGTCCATCTCTCCATAGAGTCCATCAGC AATAATTTTTGCCCAACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Trypsin; Prolyl 4-Hydroxylase Alpha Subunit; Mannitol Dehydrogenase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; 2OG-Fe(II) Oxygenase Family; 2og-Fe(Ii) Oxygenase; 2-Oxoglutarate-Fe(Ii) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily; 2OG-Fe(II) Oxygenase Family Protein; 2-Oxoglutarate-Fe(II) Oxygenase Family Protein; Dioxygenase
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MNLIASYRNKGFESVADGVMSFFDRRTDLHRNGIAFSNGSNNDSDPAKISTDISLVAIDRSDPEAFALSEVIVRGVDAGL QKYLQDRPLFSKCSPEQSLFVNPIFNIQRYAPGEGFKKWHCDWTISEEATEPVHRVLAWILYCNDVESGGTEFHWQEYHE TAERGKLVIFPAGLTHIHRGRVNKIHSKTIATGWINAGSRDSYISRLAS
Sequences:
>Translated_209_residues MNLIASYRNKGFESVADGVMSFFDRRTDLHRNGIAFSNGSNNDSDPAKISTDISLVAIDRSDPEAFALSEVIVRGVDAGL QKYLQDRPLFSKCSPEQSLFVNPIFNIQRYAPGEGFKKWHCDWTISEEATEPVHRVLAWILYCNDVESGGTEFHWQEYHE TAERGKLVIFPAGLTHIHRGRVNKIHSKTIATGWINAGSRDSYISRLAS >Mature_209_residues MNLIASYRNKGFESVADGVMSFFDRRTDLHRNGIAFSNGSNNDSDPAKISTDISLVAIDRSDPEAFALSEVIVRGVDAGL QKYLQDRPLFSKCSPEQSLFVNPIFNIQRYAPGEGFKKWHCDWTISEEATEPVHRVLAWILYCNDVESGGTEFHWQEYHE TAERGKLVIFPAGLTHIHRGRVNKIHSKTIATGWINAGSRDSYISRLAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23520; Mature: 23520
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIASYRNKGFESVADGVMSFFDRRTDLHRNGIAFSNGSNNDSDPAKISTDISLVAIDR CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECCEEEEEEEC SDPEAFALSEVIVRGVDAGLQKYLQDRPLFSKCSPEQSLFVNPIFNIQRYAPGEGFKKWH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCEEE CDWTISEEATEPVHRVLAWILYCNDVESGGTEFHWQEYHETAERGKLVIFPAGLTHIHRG CCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHC RVNKIHSKTIATGWINAGSRDSYISRLAS CHHHHHHHHHHEEECCCCCHHHHHHHHCC >Mature Secondary Structure MNLIASYRNKGFESVADGVMSFFDRRTDLHRNGIAFSNGSNNDSDPAKISTDISLVAIDR CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECCEEEEEEEC SDPEAFALSEVIVRGVDAGLQKYLQDRPLFSKCSPEQSLFVNPIFNIQRYAPGEGFKKWH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCEEE CDWTISEEATEPVHRVLAWILYCNDVESGGTEFHWQEYHETAERGKLVIFPAGLTHIHRG CCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHC RVNKIHSKTIATGWINAGSRDSYISRLAS CHHHHHHHHHHEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA