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The map label for this gene is yfeD [H]

Identifier: 124026607

GI number: 124026607

Start: 1565093

End: 1565878

Strand: Reverse

Name: yfeD [H]

Synonym: NATL1_19021

Alternate gene names: 124026607

Gene position: 1565878-1565093 (Counterclockwise)

Preceding gene: 124026609

Following gene: 124026606

Centisome position: 83.97

GC content: 39.31

Gene sequence:

>786_bases
ATGTCTTTTATCAATACAAATTGGTGGATAATTCCTCTTCTGATAACTTCCTTTTCAGGAGTGCTTTGCCCTGCCATGGG
GACTGTATTGATAACTCATAAAAGGCTTCTTCAAGTCAATTTAATTTCACACTGTGTTTTGCCAGGACTTGCCTTGGCTA
TGGCGCTTGGGATTGACCCATCTATTGGAGGTGTCTTAAGCGGATTAGTGGGAGCTATTGCAGCAGAAAGTTTGACAAAT
AAGAAAAATCAAAATTATGAAGCTGTAATGAATACAATTCTTGCTGGTTCGATGGGACTTGGTGTTTTGCTTATACCTTT
ACTTGGAATCAGGATTGATTTAGAGGCTGTTTTGTTTGGAGATTTATTAACTGCAAATTTGAGCGATTTATTAAGAACTT
TGATTGCGTTCTCGGCATTCATTTGCCTAATGCTTTTTGGGTACGACAAGCTTGTTCATATTGGTTTAGACCCAGAAGGA
GCTGCTTCAAGTGGCGTTAATGTGTCTTTTTTAAATTTAGCTCTGGGATTTACAACTGCACTTGTCATTGTGAGCTCAAT
GTCGGCAGTCGGGGTCATCCTTGTGATTGCGTTACTCTCAACTCCAACTTTGTTGGGCTTACAGAAAGCTAGCTCTCTAT
GGGTTGCGATGGTTCGATCTTCCATATTTGGATTAGTTTTATCGATCATTGGTTTTTCGCTTGCTATGTTTATGAATTTG
CCTCCAGGCCCACTTATTAGTGTTCTTTGTGTAATTTCATTGATCTTGCTTCCAAGGAGTAATTAG

Upstream 100 bases:

>100_bases
GAGAAGCTGTTGTTGTCTCTTAGTGATGTCAGGCTTGCTTGTATTCATTAGTAAGATCTTAATTTGATCTCTTTAATGAA
CATACTGAATCATTTGCATA

Downstream 100 bases:

>100_bases
AATTGAATTCAAAATCTCTTTAATTTTATTGGCTATATTTAATGAGACTCTAAGAAGATAGGATTAGATCAAGAAATCTG
AAAATAACAACGATTTGATT

Product: ABC transporter

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSFINTNWWIIPLLITSFSGVLCPAMGTVLITHKRLLQVNLISHCVLPGLALAMALGIDPSIGGVLSGLVGAIAAESLTN
KKNQNYEAVMNTILAGSMGLGVLLIPLLGIRIDLEAVLFGDLLTANLSDLLRTLIAFSAFICLMLFGYDKLVHIGLDPEG
AASSGVNVSFLNLALGFTTALVIVSSMSAVGVILVIALLSTPTLLGLQKASSLWVAMVRSSIFGLVLSIIGFSLAMFMNL
PPGPLISVLCVISLILLPRSN

Sequences:

>Translated_261_residues
MSFINTNWWIIPLLITSFSGVLCPAMGTVLITHKRLLQVNLISHCVLPGLALAMALGIDPSIGGVLSGLVGAIAAESLTN
KKNQNYEAVMNTILAGSMGLGVLLIPLLGIRIDLEAVLFGDLLTANLSDLLRTLIAFSAFICLMLFGYDKLVHIGLDPEG
AASSGVNVSFLNLALGFTTALVIVSSMSAVGVILVIALLSTPTLLGLQKASSLWVAMVRSSIFGLVLSIIGFSLAMFMNL
PPGPLISVLCVISLILLPRSN
>Mature_260_residues
SFINTNWWIIPLLITSFSGVLCPAMGTVLITHKRLLQVNLISHCVLPGLALAMALGIDPSIGGVLSGLVGAIAAESLTNK
KNQNYEAVMNTILAGSMGLGVLLIPLLGIRIDLEAVLFGDLLTANLSDLLRTLIAFSAFICLMLFGYDKLVHIGLDPEGA
ASSGVNVSFLNLALGFTTALVIVSSMSAVGVILVIALLSTPTLLGLQKASSLWVAMVRSSIFGLVLSIIGFSLAMFMNLP
PGPLISVLCVISLILLPRSN

Specific function: Part of an ATP-driven transport system yfeABCD for chelated iron [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 27356; Mature: 27225

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFINTNWWIIPLLITSFSGVLCPAMGTVLITHKRLLQVNLISHCVLPGLALAMALGIDP
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SIGGVLSGLVGAIAAESLTNKKNQNYEAVMNTILAGSMGLGVLLIPLLGIRIDLEAVLFG
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
DLLTANLSDLLRTLIAFSAFICLMLFGYDKLVHIGLDPEGAASSGVNVSFLNLALGFTTA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
LVIVSSMSAVGVILVIALLSTPTLLGLQKASSLWVAMVRSSIFGLVLSIIGFSLAMFMNL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPGPLISVLCVISLILLPRSN
CCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFINTNWWIIPLLITSFSGVLCPAMGTVLITHKRLLQVNLISHCVLPGLALAMALGIDP
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SIGGVLSGLVGAIAAESLTNKKNQNYEAVMNTILAGSMGLGVLLIPLLGIRIDLEAVLFG
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
DLLTANLSDLLRTLIAFSAFICLMLFGYDKLVHIGLDPEGAASSGVNVSFLNLALGFTTA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
LVIVSSMSAVGVILVIALLSTPTLLGLQKASSLWVAMVRSSIFGLVLSIIGFSLAMFMNL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPGPLISVLCVISLILLPRSN
CCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9495751; 11586360; 12142430 [H]