| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026606
Identifier: 124026606
GI number: 124026606
Start: 1564318
End: 1564935
Strand: Reverse
Name: 124026606
Synonym: NATL1_19011
Alternate gene names: NA
Gene position: 1564935-1564318 (Counterclockwise)
Preceding gene: 124026607
Following gene: 124026603
Centisome position: 83.92
GC content: 32.69
Gene sequence:
>618_bases ATGAAGAGAACGCAACTTAATGTAAGTATTGATCCAAAACTCTTAGAAAAGATTAAAGAGAGTGCCAGGATTTCTGGTAA ATCATTGGTTGGTTTTGTCTCTGATTGTTTTGTTAATCAAATAGAGAACCTTCCTGTTGAATCGATAGATTCTAGATTAC AAACAATTGAACAAAGGCTTCAATTAATTGAAAATAATCTTCAATTGCCAGCACTTAAGGCTCAAAGAACTCAACCTTTT ACATCTCAAGAATTAGAAAATTTTAATGAATTTATCAAAGCTGTTTTTAGAAAAGAATTAAAAAGAAAGGGATATAGATC AATGAAAGAGGCATGGAATGATTTTATAAACCATATAAATTGTTTTGAACAATGGGACGAGACATGTTCTTTTAGACTTA AAGAGTCTCTTTTTATTGAACATGCTGATCCTTTAACAAGCGAAGAAATTAATCACCTCAAAGAAGGAGACGTCTGTCCT CAACCAATCCGAACAGGGATTATTAATTGGATCAACAATTCAGATAGAGGAGAATGTTGTTGCTCCGATAAAGAGTTCCC TTCACAGCAGCAAATTTGCGAAAAGGGGCCAATTTTAGTAGAAGATATATATTCTTAG
Upstream 100 bases:
>100_bases ATAGGATTAGATCAAGAAATCTGAAAATAACAACGATTTGATTTTAGTTTGAATAAAATTGAACAAGGTGTTTTCTATTC GTCCTTTTATTGATTGAATC
Downstream 100 bases:
>100_bases ACCAATTAAGATCACTTTACGAAAGTTAATTAAATCCTAATTTGTTAAAAAACAGGGAGATGAATTGAGTCGTTTGCATA TATATTGCCAAGGATTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKRTQLNVSIDPKLLEKIKESARISGKSLVGFVSDCFVNQIENLPVESIDSRLQTIEQRLQLIENNLQLPALKAQRTQPF TSQELENFNEFIKAVFRKELKRKGYRSMKEAWNDFINHINCFEQWDETCSFRLKESLFIEHADPLTSEEINHLKEGDVCP QPIRTGIINWINNSDRGECCCSDKEFPSQQQICEKGPILVEDIYS
Sequences:
>Translated_205_residues MKRTQLNVSIDPKLLEKIKESARISGKSLVGFVSDCFVNQIENLPVESIDSRLQTIEQRLQLIENNLQLPALKAQRTQPF TSQELENFNEFIKAVFRKELKRKGYRSMKEAWNDFINHINCFEQWDETCSFRLKESLFIEHADPLTSEEINHLKEGDVCP QPIRTGIINWINNSDRGECCCSDKEFPSQQQICEKGPILVEDIYS >Mature_205_residues MKRTQLNVSIDPKLLEKIKESARISGKSLVGFVSDCFVNQIENLPVESIDSRLQTIEQRLQLIENNLQLPALKAQRTQPF TSQELENFNEFIKAVFRKELKRKGYRSMKEAWNDFINHINCFEQWDETCSFRLKESLFIEHADPLTSEEINHLKEGDVCP QPIRTGIINWINNSDRGECCCSDKEFPSQQQICEKGPILVEDIYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23825; Mature: 23825
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTQLNVSIDPKLLEKIKESARISGKSLVGFVSDCFVNQIENLPVESIDSRLQTIEQRL CCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QLIENNLQLPALKAQRTQPFTSQELENFNEFIKAVFRKELKRKGYRSMKEAWNDFINHIN HHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFEQWDETCSFRLKESLFIEHADPLTSEEINHLKEGDVCPQPIRTGIINWINNSDRGECC HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC CSDKEFPSQQQICEKGPILVEDIYS CCCCCCCCHHHHHHHCCCHHHHHCC >Mature Secondary Structure MKRTQLNVSIDPKLLEKIKESARISGKSLVGFVSDCFVNQIENLPVESIDSRLQTIEQRL CCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QLIENNLQLPALKAQRTQPFTSQELENFNEFIKAVFRKELKRKGYRSMKEAWNDFINHIN HHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFEQWDETCSFRLKESLFIEHADPLTSEEINHLKEGDVCPQPIRTGIINWINNSDRGECC HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC CSDKEFPSQQQICEKGPILVEDIYS CCCCCCCCHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA