| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is folE [H]
Identifier: 124026602
GI number: 124026602
Start: 1561192
End: 1561938
Strand: Direct
Name: folE [H]
Synonym: NATL1_18971
Alternate gene names: 124026602
Gene position: 1561192-1561938 (Clockwise)
Preceding gene: 124026600
Following gene: 124026604
Centisome position: 83.72
GC content: 37.35
Gene sequence:
>747_bases ATGACTTCTACTGCTCCTAATGAGAATGTTAAGGATAATTTAAAAGATCAAATTTCTTGCAAATTAGTCTCAGAAATAAT TCGCGAACGTATACAAGCAAATGGAGCTAGATTCCATGCAAATGATAATATTTCCGATTTCATTCAGCCTAGAGAACTAG AAACTCTTGAGAGAGAAGTTGCCACCAGAGTTAGAGATTTGCTGAAGACTTTATTGATTGATGTTGATAATGACCACAAC ACTCAAGAAACTGCAGAACGCGTTTCCAGAATGTATCTAAATGAAGTTTTTAAAGGCAGATATCATCCCCAACCTAAAGT TACTAATTTTCCTAACGATAGGAATTTAGATGAGATCTATACACTCGGGCCAATAACCGTTCGCTCTGCATGTTCTCATC ACTTTGTTCCAATTCTTGGAGATTGTTGGATAGGAATAAAACCTGGAGAAAAAGTTATTGGAATCTCGAAGTTTGCCAGA GTAGCTGATTGGGTTTTTTCTAGACCACATATTCAAGAAGAAGCTGTCATGATTCTTGCTGATGAAATAGAGCGATTATG TGAACCCAAAGGTCTAGCGATACTTGTTAAAGCTCAACATTATTGTATGAAATGGCGAGGAGTCAAAGAGCCTGAAACCA GCATGATCAACTCAATCGTTAGGGGTGATTTTCGCCATGATGCAAGCTTGAAGCAGGAGTTCTTCGAACTTGTTAAGCAA CAGTCTAATTTCGGTAAAAATTATTAG
Upstream 100 bases:
>100_bases GCGTCTAGGTATTCTGTTCATAACGAAAGTGATCTTGATATGTTAGGGTCTTAGCGCTCTAAATGTATGTCATCGGTTTT TACCCTTACAAACAAAGGTT
Downstream 100 bases:
>100_bases GAAATTTTAGAAAACTATCAACTGATCTAAAAGCGAACTCACAATACTCACTAGATTTTAAAACTAGAAATTAAAAGTAG TTTTCACCAAGGCTCCATTA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTSTAPNENVKDNLKDQISCKLVSEIIRERIQANGARFHANDNISDFIQPRELETLEREVATRVRDLLKTLLIDVDNDHN TQETAERVSRMYLNEVFKGRYHPQPKVTNFPNDRNLDEIYTLGPITVRSACSHHFVPILGDCWIGIKPGEKVIGISKFAR VADWVFSRPHIQEEAVMILADEIERLCEPKGLAILVKAQHYCMKWRGVKEPETSMINSIVRGDFRHDASLKQEFFELVKQ QSNFGKNY
Sequences:
>Translated_248_residues MTSTAPNENVKDNLKDQISCKLVSEIIRERIQANGARFHANDNISDFIQPRELETLEREVATRVRDLLKTLLIDVDNDHN TQETAERVSRMYLNEVFKGRYHPQPKVTNFPNDRNLDEIYTLGPITVRSACSHHFVPILGDCWIGIKPGEKVIGISKFAR VADWVFSRPHIQEEAVMILADEIERLCEPKGLAILVKAQHYCMKWRGVKEPETSMINSIVRGDFRHDASLKQEFFELVKQ QSNFGKNY >Mature_247_residues TSTAPNENVKDNLKDQISCKLVSEIIRERIQANGARFHANDNISDFIQPRELETLEREVATRVRDLLKTLLIDVDNDHNT QETAERVSRMYLNEVFKGRYHPQPKVTNFPNDRNLDEIYTLGPITVRSACSHHFVPILGDCWIGIKPGEKVIGISKFARV ADWVFSRPHIQEEAVMILADEIERLCEPKGLAILVKAQHYCMKWRGVKEPETSMINSIVRGDFRHDASLKQEFFELVKQQ SNFGKNY
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=127, Percent_Identity=33.8582677165354, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI4503949, Length=127, Percent_Identity=33.8582677165354, Blast_Score=89, Evalue=3e-18, Organism=Escherichia coli, GI1788476, Length=190, Percent_Identity=30, Blast_Score=110, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17560486, Length=129, Percent_Identity=34.1085271317829, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6321706, Length=191, Percent_Identity=29.8429319371728, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI24656791, Length=129, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24656796, Length=129, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24656782, Length=126, Percent_Identity=34.1269841269841, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 28593; Mature: 28462
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTAPNENVKDNLKDQISCKLVSEIIRERIQANGARFHANDNISDFIQPRELETLEREV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCCHHHHHHHHHH ATRVRDLLKTLLIDVDNDHNTQETAERVSRMYLNEVFKGRYHPQPKVTNFPNDRNLDEIY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH TLGPITVRSACSHHFVPILGDCWIGIKPGEKVIGISKFARVADWVFSRPHIQEEAVMILA CCCCHHHHHHHCCCCCHHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DEIERLCEPKGLAILVKAQHYCMKWRGVKEPETSMINSIVRGDFRHDASLKQEFFELVKQ HHHHHHCCCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QSNFGKNY HHHCCCCC >Mature Secondary Structure TSTAPNENVKDNLKDQISCKLVSEIIRERIQANGARFHANDNISDFIQPRELETLEREV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCCHHHHHHHHHH ATRVRDLLKTLLIDVDNDHNTQETAERVSRMYLNEVFKGRYHPQPKVTNFPNDRNLDEIY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH TLGPITVRSACSHHFVPILGDCWIGIKPGEKVIGISKFARVADWVFSRPHIQEEAVMILA CCCCHHHHHHHCCCCCHHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DEIERLCEPKGLAILVKAQHYCMKWRGVKEPETSMINSIVRGDFRHDASLKQEFFELVKQ HHHHHHCCCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QSNFGKNY HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA