| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is queF [H]
Identifier: 124026565
GI number: 124026565
Start: 1519743
End: 1520129
Strand: Reverse
Name: queF [H]
Synonym: NATL1_18601
Alternate gene names: 124026565
Gene position: 1520129-1519743 (Counterclockwise)
Preceding gene: 124026568
Following gene: 124026561
Centisome position: 81.52
GC content: 31.01
Gene sequence:
>387_bases ATGTATGGGGAGAGGGAAATAGAGGCTGGGAGTTTAATTTGTTTCCCAAATCCAAATATTAATAGAGATTATGAGATTTC AATAGATTTCCCTGAATTTACCTGTAAGTGTCCTTTTTCGGGATATCCTGATTTTGCAACTTTGAAAATTAAATATCAAC CAAATACTAAGGTTATAGAATTAAAGGCAATTAAACTTTACTTAAATAGCTTTCGAGAAAAGAAGATATCTCATGAAGAA GTTACGAATAAAATTATCGATGACTTTGTTGAAGTTTCTGATCCTAAGTGGATGCAATTAGAAGCTGATTTCAATCCTAG AGGTAATGTTCATACAATCATTAGAGTCTGTCATGGGAAAAGAAAAAATTTAGATCTAATTCTCTAA
Upstream 100 bases:
>100_bases TTATTTAAAGTTTGAATTTTTAATCAAGCTTTTATGTAGTGTGAGTTTTAAATGCAGTTAAAATGTGATTAGACAAGAAA AAGACATCAAAGATGAAATT
Downstream 100 bases:
>100_bases AAAACTAATAAGATTTGGCAATTCTTTTGAAAGACCAGAGAGATTTCTATTACTTAATCCACCTATATAAATCATAGATT TTTCATTTTCATGTAAGACC
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MYGEREIEAGSLICFPNPNINRDYEISIDFPEFTCKCPFSGYPDFATLKIKYQPNTKVIELKAIKLYLNSFREKKISHEE VTNKIIDDFVEVSDPKWMQLEADFNPRGNVHTIIRVCHGKRKNLDLIL
Sequences:
>Translated_128_residues MYGEREIEAGSLICFPNPNINRDYEISIDFPEFTCKCPFSGYPDFATLKIKYQPNTKVIELKAIKLYLNSFREKKISHEE VTNKIIDDFVEVSDPKWMQLEADFNPRGNVHTIIRVCHGKRKNLDLIL >Mature_128_residues MYGEREIEAGSLICFPNPNINRDYEISIDFPEFTCKCPFSGYPDFATLKIKYQPNTKVIELKAIKLYLNSFREKKISHEE VTNKIIDDFVEVSDPKWMQLEADFNPRGNVHTIIRVCHGKRKNLDLIL
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016856 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 14955; Mature: 14955
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGEREIEAGSLICFPNPNINRDYEISIDFPEFTCKCPFSGYPDFATLKIKYQPNTKVIE CCCCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEEEEEECCCCEEEE LKAIKLYLNSFREKKISHEEVTNKIIDDFVEVSDPKWMQLEADFNPRGNVHTIIRVCHGK EEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCC RKNLDLIL CCCCEEEC >Mature Secondary Structure MYGEREIEAGSLICFPNPNINRDYEISIDFPEFTCKCPFSGYPDFATLKIKYQPNTKVIE CCCCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEEEEEECCCCEEEE LKAIKLYLNSFREKKISHEEVTNKIIDDFVEVSDPKWMQLEADFNPRGNVHTIIRVCHGK EEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCC RKNLDLIL CCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA