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The map label for this gene is yfjD [C]

Identifier: 124026547

GI number: 124026547

Start: 1504193

End: 1505185

Strand: Direct

Name: yfjD [C]

Synonym: NATL1_18421

Alternate gene names: 124026547

Gene position: 1504193-1505185 (Clockwise)

Preceding gene: 124026544

Following gene: 124026548

Centisome position: 80.67

GC content: 38.57

Gene sequence:

>993_bases
ATGAGCCAAGACATTCTGCTTTTAACTGCTCTCGTTGCAGTTATTTTAATGGGTTCTGCAATGTGCTCAGGGATTGAAGC
AGCATTATTAGCAGTAAACCCATTACGCGTACATGAGCTCGCAAGGAGAAAGCCCAAAGTACTTGGAGCTAGAAGATTAG
AAAAATTACGCCACAGAATTGGAAGGACTTTAACTGTAGTAACAATTGCAAATAACAGTTTCAATATTTTTGGAAGTTTG
ATGGTTGGAAGCTACGCAACTTACATATTTCAAGATCGAATAGGAAATGTAAAATCCATATTTTTTGTTGGCCTAACTAT
TCTTGTTTTACTTCTTGGAGAAATTGTTCCCAAAGCTCTCGGCACAAGACTTGCATTGCAAATTAGTTTAACAAGCGCTC
CTGTCCTGGATTTCTTAAGCATAGTTATGCGTCCATTGCTAATAGTTCTTGAACGTCTACTACCAATCATCACTGCCAAG
AGCGAGCTAACAACAGACGAAGAAGAAATAAGACAGATGGCCAGACTTGGATCTCAAATAGGTCAAATAGAAGCTGATGA
GGCTGCAATGATATCCAAAGTTTTCCAGCTAAATGACCTTACTGCTAAAGATTTGATGACTCCACGTGTTGCCGCTCCAA
CACTTCCAGGAAGAGTTTCTTTACAATCTGTCAAATCAAACTTATTAGAAAATAATGCAACATGGTGGGTAGTATTAGGT
GAAGAAGTAGACAAGGTTGTTGGAGTTGCTAACCGTGAAAAGTTATTAGCCTCTTTACTTCAAGGAAACTCCCATTTAAC
TCCTTATGATCTAAGCGAGAATGTAGAGTTTGTACCCGAAATGATTCGAGTAGATAGACTACTTCTTGGTTTTAATGAAG
ACAAAAATGGAGTTAGAGTTGTGGTAGATGAGTTTGGTGGATTTGTTGGTTTAATAGGAGCAGAAGCTGTATTGGCAGTT
TTAGCTGGTTGGTGGAGGAAGTCAAATAAATGA

Upstream 100 bases:

>100_bases
CCACAAAAATACTCCTATTTATACTTTAGGATGGCAAGAGATCTAACTTAGTGGAAAAATAAAAGCAAAAGATCCTTACT
CTTTAAAAAATCTTTAGAGG

Downstream 100 bases:

>100_bases
TTTACCCAAGAGATATAGCTACAAAATGCAAGTTTTTACTTGGTCAATGGAAAGAGAACTTAAATCTCACTAATTACGAA
AGAACAAAATTTGAAGACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSQDILLLTALVAVILMGSAMCSGIEAALLAVNPLRVHELARRKPKVLGARRLEKLRHRIGRTLTVVTIANNSFNIFGSL
MVGSYATYIFQDRIGNVKSIFFVGLTILVLLLGEIVPKALGTRLALQISLTSAPVLDFLSIVMRPLLIVLERLLPIITAK
SELTTDEEEIRQMARLGSQIGQIEADEAAMISKVFQLNDLTAKDLMTPRVAAPTLPGRVSLQSVKSNLLENNATWWVVLG
EEVDKVVGVANREKLLASLLQGNSHLTPYDLSENVEFVPEMIRVDRLLLGFNEDKNGVRVVVDEFGGFVGLIGAEAVLAV
LAGWWRKSNK

Sequences:

>Translated_330_residues
MSQDILLLTALVAVILMGSAMCSGIEAALLAVNPLRVHELARRKPKVLGARRLEKLRHRIGRTLTVVTIANNSFNIFGSL
MVGSYATYIFQDRIGNVKSIFFVGLTILVLLLGEIVPKALGTRLALQISLTSAPVLDFLSIVMRPLLIVLERLLPIITAK
SELTTDEEEIRQMARLGSQIGQIEADEAAMISKVFQLNDLTAKDLMTPRVAAPTLPGRVSLQSVKSNLLENNATWWVVLG
EEVDKVVGVANREKLLASLLQGNSHLTPYDLSENVEFVPEMIRVDRLLLGFNEDKNGVRVVVDEFGGFVGLIGAEAVLAV
LAGWWRKSNK
>Mature_329_residues
SQDILLLTALVAVILMGSAMCSGIEAALLAVNPLRVHELARRKPKVLGARRLEKLRHRIGRTLTVVTIANNSFNIFGSLM
VGSYATYIFQDRIGNVKSIFFVGLTILVLLLGEIVPKALGTRLALQISLTSAPVLDFLSIVMRPLLIVLERLLPIITAKS
ELTTDEEEIRQMARLGSQIGQIEADEAAMISKVFQLNDLTAKDLMTPRVAAPTLPGRVSLQSVKSNLLENNATWWVVLGE
EVDKVVGVANREKLLASLLQGNSHLTPYDLSENVEFVPEMIRVDRLLLGFNEDKNGVRVVVDEFGGFVGLIGAEAVLAVL
AGWWRKSNK

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=238, Percent_Identity=22.2689075630252, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI145693175, Length=317, Percent_Identity=24.9211356466877, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1790664, Length=342, Percent_Identity=23.9766081871345, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786879, Length=156, Percent_Identity=26.9230769230769, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 36172; Mature: 36041

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDILLLTALVAVILMGSAMCSGIEAALLAVNPLRVHELARRKPKVLGARRLEKLRHRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
GRTLTVVTIANNSFNIFGSLMVGSYATYIFQDRIGNVKSIFFVGLTILVLLLGEIVPKAL
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GTRLALQISLTSAPVLDFLSIVMRPLLIVLERLLPIITAKSELTTDEEEIRQMARLGSQI
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHH
GQIEADEAAMISKVFQLNDLTAKDLMTPRVAAPTLPGRVSLQSVKSNLLENNATWWVVLG
CCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEC
EEVDKVVGVANREKLLASLLQGNSHLTPYDLSENVEFVPEMIRVDRLLLGFNEDKNGVRV
CHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEE
VVDEFGGFVGLIGAEAVLAVLAGWWRKSNK
EHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQDILLLTALVAVILMGSAMCSGIEAALLAVNPLRVHELARRKPKVLGARRLEKLRHRI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
GRTLTVVTIANNSFNIFGSLMVGSYATYIFQDRIGNVKSIFFVGLTILVLLLGEIVPKAL
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GTRLALQISLTSAPVLDFLSIVMRPLLIVLERLLPIITAKSELTTDEEEIRQMARLGSQI
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHH
GQIEADEAAMISKVFQLNDLTAKDLMTPRVAAPTLPGRVSLQSVKSNLLENNATWWVVLG
CCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEC
EEVDKVVGVANREKLLASLLQGNSHLTPYDLSENVEFVPEMIRVDRLLLGFNEDKNGVRV
CHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEE
VVDEFGGFVGLIGAEAVLAVLAGWWRKSNK
EHHHHCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]