| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026495
Identifier: 124026495
GI number: 124026495
Start: 1468008
End: 1468874
Strand: Reverse
Name: 124026495
Synonym: NATL1_17901
Alternate gene names: NA
Gene position: 1468874-1468008 (Counterclockwise)
Preceding gene: 124026496
Following gene: 124026490
Centisome position: 78.77
GC content: 29.53
Gene sequence:
>867_bases ATGATTGGTTTTTTTGCAGCAATTTCAGCGGTATTGTTTTGGACATTTTCATGTTCTATTTGGCGTAAAGAATCTGAGAA TTTATTACCAAGGCAAATAAATATTTATAAAAATGTTCTTGCCTCAATCTTATTTTTACCAGTGGTATTAACTATAAGTT GGTTGTCTAATATGAGTTCTATCTTTGTTTTGATAATAAGTGGAATAGTCGGTATTTCTATCGGTGATACTTTATATATA AATGCTTTGAAAATAATAGGAACTAGAAAAACCCTTTCATTCGAAGCTTTGACTCCAATAATTGCAACTACTTTAGGAAC ATGGAGTATCGATGAGATATATCCTCAAAAAGTGTGGGTAGGATCTTTGATTGTGTCTTTCTCTTTGTTAATGATTGTAC GACAAAATACATTAAAAAAAGAAGAGCCAAGAGAACGAAATATTCTCGGTATCCTCTGCGCATTTGGGTCGGTCCTTTGT GCTGTTTTGGCAGCTTTATTGTCGAGGGTGATTTTAATTGGTTCTACATTAACCCCTTTGCAAACAACTGAAATCAGACT TTTATCAGCATCAATATTTTTATTTTTAATTTTTAAAAAAGATTTTTTTGATATTCTTAATAATAGAGCACTAACAAAAA AAAATCATTCAAATTTAATTTTATCAACCTTACTTGGCACTAATTTTGGAATATTATTTCAACAGATAGTTTTTAAATTT TTACCTATTGGGATTGGTTGGACTTTGCTAAGTCTTTCACCTGTCTTTGCACTTTTTATTTCAAAGAGAGAGGGAGAAGA AATAAATAAATTAACAATTTTTTACTCTTTTTTATCTTTTATTGGAGTTGCTATTACTTTAATTTAG
Upstream 100 bases:
>100_bases AGTTTCCTAGAAGATAAATTTGTGTGAGTTATATCTCCTTTCTAGACTTTTGATGAATATATAAATACTTTTAAAATTTG CTTGTTAGAAAGTTTTAAAT
Downstream 100 bases:
>100_bases ACCTCAAAGTAATCATTTTCTTGCCAATATTCATCTGGATCATCTTCTACGTCGGGTGGATCTTCTAGTTCTCCGGGTTT CTCACCTAGTAGTATAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MIGFFAAISAVLFWTFSCSIWRKESENLLPRQINIYKNVLASILFLPVVLTISWLSNMSSIFVLIISGIVGISIGDTLYI NALKIIGTRKTLSFEALTPIIATTLGTWSIDEIYPQKVWVGSLIVSFSLLMIVRQNTLKKEEPRERNILGILCAFGSVLC AVLAALLSRVILIGSTLTPLQTTEIRLLSASIFLFLIFKKDFFDILNNRALTKKNHSNLILSTLLGTNFGILFQQIVFKF LPIGIGWTLLSLSPVFALFISKREGEEINKLTIFYSFLSFIGVAITLI
Sequences:
>Translated_288_residues MIGFFAAISAVLFWTFSCSIWRKESENLLPRQINIYKNVLASILFLPVVLTISWLSNMSSIFVLIISGIVGISIGDTLYI NALKIIGTRKTLSFEALTPIIATTLGTWSIDEIYPQKVWVGSLIVSFSLLMIVRQNTLKKEEPRERNILGILCAFGSVLC AVLAALLSRVILIGSTLTPLQTTEIRLLSASIFLFLIFKKDFFDILNNRALTKKNHSNLILSTLLGTNFGILFQQIVFKF LPIGIGWTLLSLSPVFALFISKREGEEINKLTIFYSFLSFIGVAITLI >Mature_288_residues MIGFFAAISAVLFWTFSCSIWRKESENLLPRQINIYKNVLASILFLPVVLTISWLSNMSSIFVLIISGIVGISIGDTLYI NALKIIGTRKTLSFEALTPIIATTLGTWSIDEIYPQKVWVGSLIVSFSLLMIVRQNTLKKEEPRERNILGILCAFGSVLC AVLAALLSRVILIGSTLTPLQTTEIRLLSASIFLFLIFKKDFFDILNNRALTKKNHSNLILSTLLGTNFGILFQQIVFKF LPIGIGWTLLSLSPVFALFISKREGEEINKLTIFYSFLSFIGVAITLI
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32150; Mature: 32150
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGFFAAISAVLFWTFSCSIWRKESENLLPRQINIYKNVLASILFLPVVLTISWLSNMSS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFVLIISGIVGISIGDTLYINALKIIGTRKTLSFEALTPIIATTLGTWSIDEIYPQKVWV HHHHHHHHHHHCCCCCCCEEEHHHEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH GSLIVSFSLLMIVRQNTLKKEEPRERNILGILCAFGSVLCAVLAALLSRVILIGSTLTPL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QTTEIRLLSASIFLFLIFKKDFFDILNNRALTKKNHSNLILSTLLGTNFGILFQQIVFKF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH LPIGIGWTLLSLSPVFALFISKREGEEINKLTIFYSFLSFIGVAITLI HHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIGFFAAISAVLFWTFSCSIWRKESENLLPRQINIYKNVLASILFLPVVLTISWLSNMSS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFVLIISGIVGISIGDTLYINALKIIGTRKTLSFEALTPIIATTLGTWSIDEIYPQKVWV HHHHHHHHHHHCCCCCCCEEEHHHEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH GSLIVSFSLLMIVRQNTLKKEEPRERNILGILCAFGSVLCAVLAALLSRVILIGSTLTPL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QTTEIRLLSASIFLFLIFKKDFFDILNNRALTKKNHSNLILSTLLGTNFGILFQQIVFKF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH LPIGIGWTLLSLSPVFALFISKREGEEINKLTIFYSFLSFIGVAITLI HHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA