Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026495

Identifier: 124026495

GI number: 124026495

Start: 1468008

End: 1468874

Strand: Reverse

Name: 124026495

Synonym: NATL1_17901

Alternate gene names: NA

Gene position: 1468874-1468008 (Counterclockwise)

Preceding gene: 124026496

Following gene: 124026490

Centisome position: 78.77

GC content: 29.53

Gene sequence:

>867_bases
ATGATTGGTTTTTTTGCAGCAATTTCAGCGGTATTGTTTTGGACATTTTCATGTTCTATTTGGCGTAAAGAATCTGAGAA
TTTATTACCAAGGCAAATAAATATTTATAAAAATGTTCTTGCCTCAATCTTATTTTTACCAGTGGTATTAACTATAAGTT
GGTTGTCTAATATGAGTTCTATCTTTGTTTTGATAATAAGTGGAATAGTCGGTATTTCTATCGGTGATACTTTATATATA
AATGCTTTGAAAATAATAGGAACTAGAAAAACCCTTTCATTCGAAGCTTTGACTCCAATAATTGCAACTACTTTAGGAAC
ATGGAGTATCGATGAGATATATCCTCAAAAAGTGTGGGTAGGATCTTTGATTGTGTCTTTCTCTTTGTTAATGATTGTAC
GACAAAATACATTAAAAAAAGAAGAGCCAAGAGAACGAAATATTCTCGGTATCCTCTGCGCATTTGGGTCGGTCCTTTGT
GCTGTTTTGGCAGCTTTATTGTCGAGGGTGATTTTAATTGGTTCTACATTAACCCCTTTGCAAACAACTGAAATCAGACT
TTTATCAGCATCAATATTTTTATTTTTAATTTTTAAAAAAGATTTTTTTGATATTCTTAATAATAGAGCACTAACAAAAA
AAAATCATTCAAATTTAATTTTATCAACCTTACTTGGCACTAATTTTGGAATATTATTTCAACAGATAGTTTTTAAATTT
TTACCTATTGGGATTGGTTGGACTTTGCTAAGTCTTTCACCTGTCTTTGCACTTTTTATTTCAAAGAGAGAGGGAGAAGA
AATAAATAAATTAACAATTTTTTACTCTTTTTTATCTTTTATTGGAGTTGCTATTACTTTAATTTAG

Upstream 100 bases:

>100_bases
AGTTTCCTAGAAGATAAATTTGTGTGAGTTATATCTCCTTTCTAGACTTTTGATGAATATATAAATACTTTTAAAATTTG
CTTGTTAGAAAGTTTTAAAT

Downstream 100 bases:

>100_bases
ACCTCAAAGTAATCATTTTCTTGCCAATATTCATCTGGATCATCTTCTACGTCGGGTGGATCTTCTAGTTCTCCGGGTTT
CTCACCTAGTAGTATAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MIGFFAAISAVLFWTFSCSIWRKESENLLPRQINIYKNVLASILFLPVVLTISWLSNMSSIFVLIISGIVGISIGDTLYI
NALKIIGTRKTLSFEALTPIIATTLGTWSIDEIYPQKVWVGSLIVSFSLLMIVRQNTLKKEEPRERNILGILCAFGSVLC
AVLAALLSRVILIGSTLTPLQTTEIRLLSASIFLFLIFKKDFFDILNNRALTKKNHSNLILSTLLGTNFGILFQQIVFKF
LPIGIGWTLLSLSPVFALFISKREGEEINKLTIFYSFLSFIGVAITLI

Sequences:

>Translated_288_residues
MIGFFAAISAVLFWTFSCSIWRKESENLLPRQINIYKNVLASILFLPVVLTISWLSNMSSIFVLIISGIVGISIGDTLYI
NALKIIGTRKTLSFEALTPIIATTLGTWSIDEIYPQKVWVGSLIVSFSLLMIVRQNTLKKEEPRERNILGILCAFGSVLC
AVLAALLSRVILIGSTLTPLQTTEIRLLSASIFLFLIFKKDFFDILNNRALTKKNHSNLILSTLLGTNFGILFQQIVFKF
LPIGIGWTLLSLSPVFALFISKREGEEINKLTIFYSFLSFIGVAITLI
>Mature_288_residues
MIGFFAAISAVLFWTFSCSIWRKESENLLPRQINIYKNVLASILFLPVVLTISWLSNMSSIFVLIISGIVGISIGDTLYI
NALKIIGTRKTLSFEALTPIIATTLGTWSIDEIYPQKVWVGSLIVSFSLLMIVRQNTLKKEEPRERNILGILCAFGSVLC
AVLAALLSRVILIGSTLTPLQTTEIRLLSASIFLFLIFKKDFFDILNNRALTKKNHSNLILSTLLGTNFGILFQQIVFKF
LPIGIGWTLLSLSPVFALFISKREGEEINKLTIFYSFLSFIGVAITLI

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32150; Mature: 32150

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFFAAISAVLFWTFSCSIWRKESENLLPRQINIYKNVLASILFLPVVLTISWLSNMSS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFVLIISGIVGISIGDTLYINALKIIGTRKTLSFEALTPIIATTLGTWSIDEIYPQKVWV
HHHHHHHHHHHCCCCCCCEEEHHHEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
GSLIVSFSLLMIVRQNTLKKEEPRERNILGILCAFGSVLCAVLAALLSRVILIGSTLTPL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QTTEIRLLSASIFLFLIFKKDFFDILNNRALTKKNHSNLILSTLLGTNFGILFQQIVFKF
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
LPIGIGWTLLSLSPVFALFISKREGEEINKLTIFYSFLSFIGVAITLI
HHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGFFAAISAVLFWTFSCSIWRKESENLLPRQINIYKNVLASILFLPVVLTISWLSNMSS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFVLIISGIVGISIGDTLYINALKIIGTRKTLSFEALTPIIATTLGTWSIDEIYPQKVWV
HHHHHHHHHHHCCCCCCCEEEHHHEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
GSLIVSFSLLMIVRQNTLKKEEPRERNILGILCAFGSVLCAVLAALLSRVILIGSTLTPL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QTTEIRLLSASIFLFLIFKKDFFDILNNRALTKKNHSNLILSTLLGTNFGILFQQIVFKF
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
LPIGIGWTLLSLSPVFALFISKREGEEINKLTIFYSFLSFIGVAITLI
HHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA