| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is fabZ [H]
Identifier: 124026468
GI number: 124026468
Start: 1443771
End: 1444178
Strand: Reverse
Name: fabZ [H]
Synonym: NATL1_17631
Alternate gene names: 124026468
Gene position: 1444178-1443771 (Counterclockwise)
Preceding gene: 124026469
Following gene: 124026467
Centisome position: 77.45
GC content: 41.18
Gene sequence:
>408_bases ATGGGGCTTTTGCCACATAGATATCCCTTTGCGCTTGTTGACAGAGTGATAGAACATGATCAAGGCAAGAAAGCTGTGGC AATAAAAAATGTCACTCTTAATGAGCCGCAATTTCAAGGCCATTTTCCTGATAGACCACTAATGCCTGGAGTTTTAATAG TAGAAGCAATGGCTCAAGTCGGTGGTTTGATTGTTTCTCAAATGCCTGATCTTCCAAAAGGGCTTTTTGTGTTCGCTGGG ATTGATTCGGTTCGGTTTAGGCGTCCAGTGGTTCCAGGAGATCAATTATTGATATCTTGTGAGTTGATAAGCATCAAAAG AAAGAGATTTGGGAAAGTTAAGGGAGAAGCAAAAGTGGATGATCAGTTGGTTTGTTCTGGAGATTTGATGTTCTCTCTTG TGGATTGA
Upstream 100 bases:
>100_bases TGAATTTGCAGCTTCTCTTCAAAAAGTATTAACTTAATTAAATCTGATTTTGACTGAAATTTCTCCTTCCCAACCTCTTG TTTTAAATAGCGAGCAAATA
Downstream 100 bases:
>100_bases AGTAATGATTGAACGTCAATCTTCTAAAAGCTTAATTGCAGATAACAAAGTAAATATTCATGAATTTGCGGACGTCTCTC CAAAAGCTGAACTTGGCAGA
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGLLPHRYPFALVDRVIEHDQGKKAVAIKNVTLNEPQFQGHFPDRPLMPGVLIVEAMAQVGGLIVSQMPDLPKGLFVFAG IDSVRFRRPVVPGDQLLISCELISIKRKRFGKVKGEAKVDDQLVCSGDLMFSLVD
Sequences:
>Translated_135_residues MGLLPHRYPFALVDRVIEHDQGKKAVAIKNVTLNEPQFQGHFPDRPLMPGVLIVEAMAQVGGLIVSQMPDLPKGLFVFAG IDSVRFRRPVVPGDQLLISCELISIKRKRFGKVKGEAKVDDQLVCSGDLMFSLVD >Mature_134_residues GLLPHRYPFALVDRVIEHDQGKKAVAIKNVTLNEPQFQGHFPDRPLMPGVLIVEAMAQVGGLIVSQMPDLPKGLFVFAGI DSVRFRRPVVPGDQLLISCELISIKRKRFGKVKGEAKVDDQLVCSGDLMFSLVD
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=130, Percent_Identity=50, Blast_Score=130, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 14923; Mature: 14792
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLPHRYPFALVDRVIEHDQGKKAVAIKNVTLNEPQFQGHFPDRPLMPGVLIVEAMAQV CCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH GGLIVSQMPDLPKGLFVFAGIDSVRFRRPVVPGDQLLISCELISIKRKRFGKVKGEAKVD HHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCC DQLVCSGDLMFSLVD CEEEECCCEEEEECC >Mature Secondary Structure GLLPHRYPFALVDRVIEHDQGKKAVAIKNVTLNEPQFQGHFPDRPLMPGVLIVEAMAQV CCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH GGLIVSQMPDLPKGLFVFAGIDSVRFRRPVVPGDQLLISCELISIKRKRFGKVKGEAKVD HHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCC DQLVCSGDLMFSLVD CEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]