Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026444

Identifier: 124026444

GI number: 124026444

Start: 1424368

End: 1425591

Strand: Reverse

Name: 124026444

Synonym: NATL1_17391

Alternate gene names: NA

Gene position: 1425591-1424368 (Counterclockwise)

Preceding gene: 124026445

Following gene: 124026443

Centisome position: 76.45

GC content: 36.6

Gene sequence:

>1224_bases
TTGAGCGTAAATTCATCTTTAGATCTTCCAAGCAATATTGCATTAGTACATGAGTGGTTTACTCCAAGATCGACAGGAGG
TGCTGAGAATGTTGTTCAGGTGATTGATGATTTGTTATCTGAAATTGCATCGCAGCCAGAACTGTTTTCTTTGGTTAATG
AAGAGAGGTTAGAAAAAAATAGCTGGTTATTTGATCGAAAAGTACATACTAGCTTTATTCAAAATTTACCATTCGGGATC
TCACATGTTCAACAATATTTACCCCTTTTGCCTTTTGCAATTGAGCAACTCGATTTTGAGGGATATCCATTGATTTTAAG
CAGTAATCATCTTGTCGCTAAGGGAATTTTGACATCGCCTGATCAACTTCATATTAGTTATGTCCATACACCTGTTAGAT
ACGCTTGGGATCAAATGAATATATATTTGAAAAGATCTTTTTTAAGAAAAATTGGTTTAGGGCCGATAATTAGATGGCAA
TTGCATACTTTGAGGCAATGGGATCAATTAAGTAGCTCAAGAGTAGATTATCTGTTGGCCAATTCTAATTTTACGGCAAA
AAGGATTTGGAAGTATTGGAGAAGGCGTTCAGAGGTTCTGCATCCACCTGTTGATGTAAATCGTTTTGAATGGAATAGGC
CTAGGGAAGATTTCTATTTAAGTGTCTGTAGATTGGTTCCTAATAAAAGGGTTGATTTACTTGTTAGGGCTTTTAATAGG
CTTAAATTGCCTTTAATAGTTGTTGGCGACGGAGTGGAAAAGGAATATTTAAAAAAACTTGCAGGTCCAACTGTTCAAAT
TATTGGTTTTCAAAGCAAAGAGAAGATTGAAAGTCTAATGAGCAGATGTAGAGCCTTTGTCTATGCTGGTATTGAGGATT
TTGGAATAGCTCCTGTGGAGGCAATGGCCTCAGGTGCTCCTGTGATTGCTTTTGGTAAGGGAGGGGTTTTAGATACAGTT
AAATGTTTTCATTCTGATTCTGATAAAGGAGCAACTGGCCTTTTGTTCCCTTCTCAGACAGTAAAGTCCCTGGTTGAAGC
AATCGAATTTTTCAAGCAAAAGCAACTTTGGAGAGATTTAAAACCTGAGTTCATTAGAGATTGGAGCAATTCTTTTTCTC
AAGATTCTTTTAAAGATAAATTTGCCAAAACCATAAATAGAGCTTGGAGGGAGCATGTCAATTCTTGTGACATTGCTACT
AGTGACCTTACTTCTTCATCATAA

Upstream 100 bases:

>100_bases
AAATAATTTAAGTTTCAACAATTGATGATTTCATTCTATCTTGTCATAATATCTAAATTGCAATAAAATAAAAATAATTT
AAGGATTTAAGGATATTACT

Downstream 100 bases:

>100_bases
AAATCCTAATTATGTATGGTGTAAATCTATTCGAGTAGTGAGCTTACTAACTCAATAATTTGTGCAAACTAATCCTAGAA
AATCTTTATTACGATGGTCT

Product: glycosyltransferase

Products: NA

Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Mannosyltransferase; Glycosyl Transferase Group 1 Protein; First Mannosyl Transferase; Mannosyl Transferase; Glycosyltransferase Protein; Glycosyl Transferase Group 1 Family; Glycosyltransferase Group 1 Family Protein; Lipopolysaccharide Biosynthesys-Related Glycosyltransferase; First Mannosyl Transferase WbaZ; Group 1 Family Glycosyltransferase; Glycosyltransferase Family 4 Domain Protein; Lipopolysaccharide Biosynthesis Protein; First Mannosyl Transferase O- Antigen Biosynthesis; Aldehyde Dehydrogenase; Hexosyltransferase; Glycosyl Transferase Family Protein; Mannose-1-Phosphate Guanylyltransferase

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSVNSSLDLPSNIALVHEWFTPRSTGGAENVVQVIDDLLSEIASQPELFSLVNEERLEKNSWLFDRKVHTSFIQNLPFGI
SHVQQYLPLLPFAIEQLDFEGYPLILSSNHLVAKGILTSPDQLHISYVHTPVRYAWDQMNIYLKRSFLRKIGLGPIIRWQ
LHTLRQWDQLSSSRVDYLLANSNFTAKRIWKYWRRRSEVLHPPVDVNRFEWNRPREDFYLSVCRLVPNKRVDLLVRAFNR
LKLPLIVVGDGVEKEYLKKLAGPTVQIIGFQSKEKIESLMSRCRAFVYAGIEDFGIAPVEAMASGAPVIAFGKGGVLDTV
KCFHSDSDKGATGLLFPSQTVKSLVEAIEFFKQKQLWRDLKPEFIRDWSNSFSQDSFKDKFAKTINRAWREHVNSCDIAT
SDLTSSS

Sequences:

>Translated_407_residues
MSVNSSLDLPSNIALVHEWFTPRSTGGAENVVQVIDDLLSEIASQPELFSLVNEERLEKNSWLFDRKVHTSFIQNLPFGI
SHVQQYLPLLPFAIEQLDFEGYPLILSSNHLVAKGILTSPDQLHISYVHTPVRYAWDQMNIYLKRSFLRKIGLGPIIRWQ
LHTLRQWDQLSSSRVDYLLANSNFTAKRIWKYWRRRSEVLHPPVDVNRFEWNRPREDFYLSVCRLVPNKRVDLLVRAFNR
LKLPLIVVGDGVEKEYLKKLAGPTVQIIGFQSKEKIESLMSRCRAFVYAGIEDFGIAPVEAMASGAPVIAFGKGGVLDTV
KCFHSDSDKGATGLLFPSQTVKSLVEAIEFFKQKQLWRDLKPEFIRDWSNSFSQDSFKDKFAKTINRAWREHVNSCDIAT
SDLTSSS
>Mature_406_residues
SVNSSLDLPSNIALVHEWFTPRSTGGAENVVQVIDDLLSEIASQPELFSLVNEERLEKNSWLFDRKVHTSFIQNLPFGIS
HVQQYLPLLPFAIEQLDFEGYPLILSSNHLVAKGILTSPDQLHISYVHTPVRYAWDQMNIYLKRSFLRKIGLGPIIRWQL
HTLRQWDQLSSSRVDYLLANSNFTAKRIWKYWRRRSEVLHPPVDVNRFEWNRPREDFYLSVCRLVPNKRVDLLVRAFNRL
KLPLIVVGDGVEKEYLKKLAGPTVQIIGFQSKEKIESLMSRCRAFVYAGIEDFGIAPVEAMASGAPVIAFGKGGVLDTVK
CFHSDSDKGATGLLFPSQTVKSLVEAIEFFKQKQLWRDLKPEFIRDWSNSFSQDSFKDKFAKTINRAWREHVNSCDIATS
DLTSSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI32564184, Length=259, Percent_Identity=26.6409266409266, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46678; Mature: 46547

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNSSLDLPSNIALVHEWFTPRSTGGAENVVQVIDDLLSEIASQPELFSLVNEERLEKN
CCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
SWLFDRKVHTSFIQNLPFGISHVQQYLPLLPFAIEQLDFEGYPLILSSNHLVAKGILTSP
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCC
DQLHISYVHTPVRYAWDQMNIYLKRSFLRKIGLGPIIRWQLHTLRQWDQLSSSRVDYLLA
CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
NSNFTAKRIWKYWRRRSEVLHPPVDVNRFEWNRPREDFYLSVCRLVPNKRVDLLVRAFNR
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LKLPLIVVGDGVEKEYLKKLAGPTVQIIGFQSKEKIESLMSRCRAFVYAGIEDFGIAPVE
CCCCEEEECCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHCCCCCHH
AMASGAPVIAFGKGGVLDTVKCFHSDSDKGATGLLFPSQTVKSLVEAIEFFKQKQLWRDL
HHCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHC
KPEFIRDWSNSFSQDSFKDKFAKTINRAWREHVNSCDIATSDLTSSS
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVNSSLDLPSNIALVHEWFTPRSTGGAENVVQVIDDLLSEIASQPELFSLVNEERLEKN
CCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
SWLFDRKVHTSFIQNLPFGISHVQQYLPLLPFAIEQLDFEGYPLILSSNHLVAKGILTSP
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCC
DQLHISYVHTPVRYAWDQMNIYLKRSFLRKIGLGPIIRWQLHTLRQWDQLSSSRVDYLLA
CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
NSNFTAKRIWKYWRRRSEVLHPPVDVNRFEWNRPREDFYLSVCRLVPNKRVDLLVRAFNR
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LKLPLIVVGDGVEKEYLKKLAGPTVQIIGFQSKEKIESLMSRCRAFVYAGIEDFGIAPVE
CCCCEEEECCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHCCCCCHH
AMASGAPVIAFGKGGVLDTVKCFHSDSDKGATGLLFPSQTVKSLVEAIEFFKQKQLWRDL
HHCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHC
KPEFIRDWSNSFSQDSFKDKFAKTINRAWREHVNSCDIATSDLTSSS
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA