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The map label for this gene is sodN [H]

Identifier: 124026419

GI number: 124026419

Start: 1400368

End: 1400859

Strand: Direct

Name: sodN [H]

Synonym: NATL1_17141

Alternate gene names: 124026419

Gene position: 1400368-1400859 (Clockwise)

Preceding gene: 124026418

Following gene: 124026420

Centisome position: 75.1

GC content: 40.65

Gene sequence:

>492_bases
ATGTTCACAAATTATTCTCAGATGTTGAGCGAAACACTTACATCAATCTTTAACAAGCTTCCAGCAAAATCTGTTCACGC
TCACTGTGACGGACCTTGCGGTGTATACGACCCTGCTTCAGCAAGAGTTGCAGCAGAAGCAGTTTTGTCTATGACAAAAA
AACTTATTGCTCTAGCTCCAGCTGGTAACGATCAAGCTTCCATTTCAGCTTATAACAACACTTTTTCTCGCTTCGTTGCG
ATTAAAGAAGAAGAATCACAAAAGGCCAAAAAAGAACTTCTAATCCTCTGGACTGATTACTTCAAGCCTGAGCACCTAGC
TACATATCCAGATCTTCATGACACTTTTTGGAAAGCAGCAAAGCTTTGTAGTGCATGCAAGGTAAATATTGATCAAACCA
AGGCAGAAGAACTATTAGCAGCTGTACAAAAGATTCACCCTATGTTTTGGTCATCAAAAGGTAGAAGTGATAGCTGGGTT
ACCGCAAGCTGA

Upstream 100 bases:

>100_bases
AAGTGGAATTATTAGCTGTTAAGTGAGTTTCTTAAATTATTCAGAAAGCTCTAGATAAAGTTATGGCGTTTGTTGACAAA
CGCCATTAATGTAAAAAAAA

Downstream 100 bases:

>100_bases
TAAAAGTCTTTTCCACAAGCCAGACTTATTTACTTTATTTACTTTAATAATCGGTTACCGACAACATTTACGTGTTGTCG
GTACTTCTATGGAAAGAACT

Product: putative nickel-containing superoxide dismutase precursor (NISOD)

Products: NA

Alternate protein names: NiSOD; Nickel-containing superoxide dismutase [H]

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MFTNYSQMLSETLTSIFNKLPAKSVHAHCDGPCGVYDPASARVAAEAVLSMTKKLIALAPAGNDQASISAYNNTFSRFVA
IKEEESQKAKKELLILWTDYFKPEHLATYPDLHDTFWKAAKLCSACKVNIDQTKAEELLAAVQKIHPMFWSSKGRSDSWV
TAS

Sequences:

>Translated_163_residues
MFTNYSQMLSETLTSIFNKLPAKSVHAHCDGPCGVYDPASARVAAEAVLSMTKKLIALAPAGNDQASISAYNNTFSRFVA
IKEEESQKAKKELLILWTDYFKPEHLATYPDLHDTFWKAAKLCSACKVNIDQTKAEELLAAVQKIHPMFWSSKGRSDSWV
TAS
>Mature_163_residues
MFTNYSQMLSETLTSIFNKLPAKSVHAHCDGPCGVYDPASARVAAEAVLSMTKKLIALAPAGNDQASISAYNNTFSRFVA
IKEEESQKAKKELLILWTDYFKPEHLATYPDLHDTFWKAAKLCSACKVNIDQTKAEELLAAVQKIHPMFWSSKGRSDSWV
TAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nickel superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014123 [H]

Pfam domain/function: PF09055 Sod_Ni [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 18077; Mature: 18077

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTNYSQMLSETLTSIFNKLPAKSVHAHCDGPCGVYDPASARVAAEAVLSMTKKLIALAP
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
AGNDQASISAYNNTFSRFVAIKEEESQKAKKELLILWTDYFKPEHLATYPDLHDTFWKAA
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCHHCCCCCHHHHHHHHH
KLCSACKVNIDQTKAEELLAAVQKIHPMFWSSKGRSDSWVTAS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECC
>Mature Secondary Structure
MFTNYSQMLSETLTSIFNKLPAKSVHAHCDGPCGVYDPASARVAAEAVLSMTKKLIALAP
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
AGNDQASISAYNNTFSRFVAIKEEESQKAKKELLILWTDYFKPEHLATYPDLHDTFWKAA
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCHHCCCCCHHHHHHHHH
KLCSACKVNIDQTKAEELLAAVQKIHPMFWSSKGRSDSWVTAS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8836134 [H]