| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026332
Identifier: 124026332
GI number: 124026332
Start: 1331288
End: 1331815
Strand: Direct
Name: 124026332
Synonym: NATL1_16261
Alternate gene names: NA
Gene position: 1331288-1331815 (Clockwise)
Preceding gene: 124026331
Following gene: 124026333
Centisome position: 71.39
GC content: 43.37
Gene sequence:
>528_bases GTGAAAGAATCAGTCGTCGAAATCAACGAGGAGCTGAGCTGCGTGGGGCAGTCGCTAAGGGCTGTGGCGGCCAACCTCTC CGATATAAAGAGCAACATCAAGCCTGGGAACTGGAGGGCCTTCTTGAAGTCAGGAGCAATCAACTGCTCTGAAAGGTTTG CTATTGACCTTGTAAGTGCATACACAAACTGGCTAGGTGGCTCCGATATAGACGACAACATGCTTGCGTCACTAACGCCC AGATCGTTGGCATTAATGGGAAGCAAAGGAGTGACTGACAAGGAGCGACAAAAGGTATTCGAAGCCGTTGAGAACGGCGA AAGAATGACAGAAGCGACTGTAAGAACCCTAGTGAAAGGGAAAAAGAAAAAAGCCAACAAAGTCTCACAAAAAAGCGAAA GCGAAAAGATTAAATCACTGAAAGAAAAGATCGAAACTTACAAGAAAGTAATCAATAACCTTCAAGATGAAAACAAAAAA CTTAGCAAACTACTATCAAATAGAGAAAAAATTGATTCACTTGTCTAG
Upstream 100 bases:
>100_bases TCGGTCTATGGAATTATCGCCTACAGAGGTGGTCGACTTAGCAAGTATTCCGCTCAACAGCGAAGTCACTAAGGGGCTCG TGCCTGCGCAGGTGGAGTAC
Downstream 100 bases:
>100_bases CAATTATTACTAAAAAAGCAATCCTCCACTACATTATTAAAAATGAAAAGCACCAACTTTAGCTCTAGAATCTATAAACA AATTAAATCTAAAAATAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKESVVEINEELSCVGQSLRAVAANLSDIKSNIKPGNWRAFLKSGAINCSERFAIDLVSAYTNWLGGSDIDDNMLASLTP RSLALMGSKGVTDKERQKVFEAVENGERMTEATVRTLVKGKKKKANKVSQKSESEKIKSLKEKIETYKKVINNLQDENKK LSKLLSNREKIDSLV
Sequences:
>Translated_175_residues MKESVVEINEELSCVGQSLRAVAANLSDIKSNIKPGNWRAFLKSGAINCSERFAIDLVSAYTNWLGGSDIDDNMLASLTP RSLALMGSKGVTDKERQKVFEAVENGERMTEATVRTLVKGKKKKANKVSQKSESEKIKSLKEKIETYKKVINNLQDENKK LSKLLSNREKIDSLV >Mature_175_residues MKESVVEINEELSCVGQSLRAVAANLSDIKSNIKPGNWRAFLKSGAINCSERFAIDLVSAYTNWLGGSDIDDNMLASLTP RSLALMGSKGVTDKERQKVFEAVENGERMTEATVRTLVKGKKKKANKVSQKSESEKIKSLKEKIETYKKVINNLQDENKK LSKLLSNREKIDSLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19465; Mature: 19465
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKESVVEINEELSCVGQSLRAVAANLSDIKSNIKPGNWRAFLKSGAINCSERFAIDLVSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHH YTNWLGGSDIDDNMLASLTPRSLALMGSKGVTDKERQKVFEAVENGERMTEATVRTLVKG HHHHCCCCCCCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH KKKKANKVSQKSESEKIKSLKEKIETYKKVINNLQDENKKLSKLLSNREKIDSLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKESVVEINEELSCVGQSLRAVAANLSDIKSNIKPGNWRAFLKSGAINCSERFAIDLVSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHH YTNWLGGSDIDDNMLASLTPRSLALMGSKGVTDKERQKVFEAVENGERMTEATVRTLVKG HHHHCCCCCCCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH KKKKANKVSQKSESEKIKSLKEKIETYKKVINNLQDENKKLSKLLSNREKIDSLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA