| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is piuC [C]
Identifier: 124026325
GI number: 124026325
Start: 1323336
End: 1324001
Strand: Direct
Name: piuC [C]
Synonym: NATL1_16191
Alternate gene names: 124026325
Gene position: 1323336-1324001 (Clockwise)
Preceding gene: 124026323
Following gene: 124026326
Centisome position: 70.97
GC content: 33.78
Gene sequence:
>666_bases ATGGAATATTTAACTCATTCTCTAATAGATGAAACAGAAGCTCTTCAAATAGTCAATAAGCTAAAAGCAGAGAAATCATC CTGGCAAGATGGCAAAAAAACTGCAGGAAGTCATGCTGCAGAAATCAAATCTAATTTTCAATTAGATAAAAATTCAAAAT TATCAATAGAGCTTAGAGATGTCATTGTTAATAAAATAATTTCGAATCCTCTTCTAAAAAGTTTTACATTACCTAGTCTT ATTCATGGAGTGATGTTTACTCAATCCCTAGTTGGGCATAGCTATGGGTCACATATCGATAATCCTTATATGCCCTCAGG AAGAAGTGATCTATCTTTTACCTTGTTTTTAAACGCGCCAGAAGATTATGAAGGTGGTGAATTATGTATTCAGACGATCA ATAAAACTGAAAAAATTAAACTTTCTGCTGGAGAAATTATAATTTATCCGAGCACTCAGCTACATTCTGTTGCTGAAGTC AAAGATGGTGAACGTCATGTATGTGTAGGCTGGATTCAAAGCTATGTTCAAAACAATGAAGATAGAAATTTCTTATTTGG ACTGGATGCAGGAGCAAAAGGCTTACTAGCAAAACATGGAAGATCCGATGAATTAGATTTAATTTTCCAGGCTTACAGCA ATATCCTAAGAAGATTAGGAGATTGA
Upstream 100 bases:
>100_bases AGATACTGATAAAAATAGATTCGCAACTTTGATACGTATCGACGTATAAATTGATATCTTATTTATACTTTAGGATGGTA ATTAAACCTAGCTAATAAAG
Downstream 100 bases:
>100_bases ATCGATCACTTTATACAAGCAGAAGTAAAAAAAGAACTTTCATTAGAAGTCTCGACCTATCAAAATAGAACAAATCAAAC TAGGCATGCCAAGTAAAACA
Product: putative hydroxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MEYLTHSLIDETEALQIVNKLKAEKSSWQDGKKTAGSHAAEIKSNFQLDKNSKLSIELRDVIVNKIISNPLLKSFTLPSL IHGVMFTQSLVGHSYGSHIDNPYMPSGRSDLSFTLFLNAPEDYEGGELCIQTINKTEKIKLSAGEIIIYPSTQLHSVAEV KDGERHVCVGWIQSYVQNNEDRNFLFGLDAGAKGLLAKHGRSDELDLIFQAYSNILRRLGD
Sequences:
>Translated_221_residues MEYLTHSLIDETEALQIVNKLKAEKSSWQDGKKTAGSHAAEIKSNFQLDKNSKLSIELRDVIVNKIISNPLLKSFTLPSL IHGVMFTQSLVGHSYGSHIDNPYMPSGRSDLSFTLFLNAPEDYEGGELCIQTINKTEKIKLSAGEIIIYPSTQLHSVAEV KDGERHVCVGWIQSYVQNNEDRNFLFGLDAGAKGLLAKHGRSDELDLIFQAYSNILRRLGD >Mature_221_residues MEYLTHSLIDETEALQIVNKLKAEKSSWQDGKKTAGSHAAEIKSNFQLDKNSKLSIELRDVIVNKIISNPLLKSFTLPSL IHGVMFTQSLVGHSYGSHIDNPYMPSGRSDLSFTLFLNAPEDYEGGELCIQTINKTEKIKLSAGEIIIYPSTQLHSVAEV KDGERHVCVGWIQSYVQNNEDRNFLFGLDAGAKGLLAKHGRSDELDLIFQAYSNILRRLGD
Specific function: Unknown
COG id: COG3128
COG function: function code S; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe2OG dioxygenase domain
Homologues:
Organism=Escherichia coli, GI87081784, Length=199, Percent_Identity=34.1708542713568, Blast_Score=135, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1619_PROM1 (A2C3W6)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001015441.1 - ProteinModelPortal: A2C3W6 - STRING: A2C3W6 - GeneID: 4779962 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_16191 - eggNOG: COG3128 - HOGENOM: HBG285605 - OMA: ADWADGK - ProtClustDB: PRK05467 - BioCyc: PMAR167555:NATL1_16191-MONOMER - HAMAP: MF_00657 - InterPro: IPR006620 - SMART: SM00702
Pfam domain/function: NA
EC number: 1.14.11.- [C]
Molecular weight: Translated: 24651; Mature: 24651
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS51471 FE2OG_OXY
Important sites: BINDING 165-165
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYLTHSLIDETEALQIVNKLKAEKSSWQDGKKTAGSHAAEIKSNFQLDKNSKLSIELRD CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHCCEECCCCEEEEHHHH VIVNKIISNPLLKSFTLPSLIHGVMFTQSLVGHSYGSHIDNPYMPSGRSDLSFTLFLNAP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECC EDYEGGELCIQTINKTEKIKLSAGEIIIYPSTQLHSVAEVKDGERHVCVGWIQSYVQNNE CCCCCHHHHHHHCCCCCEEEEECCEEEEECCHHHHHHHHHCCCCCEEHHHHHHHHHHCCC DRNFLFGLDAGAKGLLAKHGRSDELDLIFQAYSNILRRLGD CCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEYLTHSLIDETEALQIVNKLKAEKSSWQDGKKTAGSHAAEIKSNFQLDKNSKLSIELRD CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHCCEECCCCEEEEHHHH VIVNKIISNPLLKSFTLPSLIHGVMFTQSLVGHSYGSHIDNPYMPSGRSDLSFTLFLNAP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECC EDYEGGELCIQTINKTEKIKLSAGEIIIYPSTQLHSVAEVKDGERHVCVGWIQSYVQNNE CCCCCHHHHHHHCCCCCEEEEECCEEEEECCHHHHHHHHHCCCCCEEHHHHHHHHHHCCC DRNFLFGLDAGAKGLLAKHGRSDELDLIFQAYSNILRRLGD CCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA