| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026286
Identifier: 124026286
GI number: 124026286
Start: 1286946
End: 1287854
Strand: Direct
Name: 124026286
Synonym: NATL1_15801
Alternate gene names: NA
Gene position: 1286946-1287854 (Clockwise)
Preceding gene: 124026285
Following gene: 124026287
Centisome position: 69.02
GC content: 35.86
Gene sequence:
>909_bases GTGTATCATCTTTATTATTTATCTAGATTTCTAGTGTCTCGTCTATATAAAACCCTGCCACTGCTGGTTATTGCAAGTTT TTCCACAAGCCTATTGGGTTGTTCTAATTCATCTAATTCGGTTTCCAAGACTGATCCATGTGAAATTATTGTTTCTGAAA ATTCAGCAAAAGAAAGCACACTTAAGGAAGCTGAATCCAATGAAACTCTCAGAGGTATTAGATCTCATACGACAAGAAAA GTTGTTCTAATGCCAATTACAAGTGCTACTGGTACTAGCAATGCAAACCCCTACATGGGAGCAATGATGGGAACTTCCCA AAGTAGTGGCGCAGAGCTTACTGGTTTCGCAACTGAAATTATGAATCAAGCATTTAGGAATGAAGGAATAAAAACAGTCG CTTGGTTCAAAGTTTCGAAGAAACTAAAAGAAGTACTAAACACCTCAAGTGGCAATTCATATTCTGGTGTAAATATGTTT GGAGGAAATCAAACTCAAGTCAATGACGAAAATTTAAACGAAGTTATTGAAGTAGCTAAAGAGCTTGATGCTTGTTACGT TGTTAGACCAGTCATCTTAAAATCATCTAATACAAGTAACACTCAAACCTCCTATAACCCAGTTGGTCTTGCTTTAGGCT TTGGTGGATTAGCTGGCAGCACAAAGACGACTAATAACGCTGAGATTGACATTAAAATAGATATAATCAGTACACGAGAA GAGGATATTATTGCCTCCAAAACATTCTCGGGAAGGAGTGCACAAGTCACTAAAAAAAGAGCAAATACACTTGATGGAAT AACAGGTTCTAATTTATTTAGTGGAGGTTCATCAACTGATCAATTAAGAATAGCTTTTTATGACACTATTGATAAAATAG TTGAGTTTCTAGAAGATAAAATGCTCTAA
Upstream 100 bases:
>100_bases ATTTCTCTATTAGTTAAGAATATTTCTTCAAAGAGTGATTAGTATGATGCCCAAATTTCATCAATAATTTTTCATGAATT GAACAAAAGAGTCCTCCAAA
Downstream 100 bases:
>100_bases ATTTTATGTTTAAAAATATTACTTTATCAACTATTCTATCAGCTACTTTCATATTTTTTATACCCAATATAAAAGCAGCT GATGAATTCCTTGATCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MYHLYYLSRFLVSRLYKTLPLLVIASFSTSLLGCSNSSNSVSKTDPCEIIVSENSAKESTLKEAESNETLRGIRSHTTRK VVLMPITSATGTSNANPYMGAMMGTSQSSGAELTGFATEIMNQAFRNEGIKTVAWFKVSKKLKEVLNTSSGNSYSGVNMF GGNQTQVNDENLNEVIEVAKELDACYVVRPVILKSSNTSNTQTSYNPVGLALGFGGLAGSTKTTNNAEIDIKIDIISTRE EDIIASKTFSGRSAQVTKKRANTLDGITGSNLFSGGSSTDQLRIAFYDTIDKIVEFLEDKML
Sequences:
>Translated_302_residues MYHLYYLSRFLVSRLYKTLPLLVIASFSTSLLGCSNSSNSVSKTDPCEIIVSENSAKESTLKEAESNETLRGIRSHTTRK VVLMPITSATGTSNANPYMGAMMGTSQSSGAELTGFATEIMNQAFRNEGIKTVAWFKVSKKLKEVLNTSSGNSYSGVNMF GGNQTQVNDENLNEVIEVAKELDACYVVRPVILKSSNTSNTQTSYNPVGLALGFGGLAGSTKTTNNAEIDIKIDIISTRE EDIIASKTFSGRSAQVTKKRANTLDGITGSNLFSGGSSTDQLRIAFYDTIDKIVEFLEDKML >Mature_302_residues MYHLYYLSRFLVSRLYKTLPLLVIASFSTSLLGCSNSSNSVSKTDPCEIIVSENSAKESTLKEAESNETLRGIRSHTTRK VVLMPITSATGTSNANPYMGAMMGTSQSSGAELTGFATEIMNQAFRNEGIKTVAWFKVSKKLKEVLNTSSGNSYSGVNMF GGNQTQVNDENLNEVIEVAKELDACYVVRPVILKSSNTSNTQTSYNPVGLALGFGGLAGSTKTTNNAEIDIKIDIISTRE EDIIASKTFSGRSAQVTKKRANTLDGITGSNLFSGGSSTDQLRIAFYDTIDKIVEFLEDKML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32723; Mature: 32723
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHLYYLSRFLVSRLYKTLPLLVIASFSTSLLGCSNSSNSVSKTDPCEIIVSENSAKEST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEECCCCHHHH LKEAESNETLRGIRSHTTRKVVLMPITSATGTSNANPYMGAMMGTSQSSGAELTGFATEI HHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHH MNQAFRNEGIKTVAWFKVSKKLKEVLNTSSGNSYSGVNMFGGNQTQVNDENLNEVIEVAK HHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH ELDACYVVRPVILKSSNTSNTQTSYNPVGLALGFGGLAGSTKTTNNAEIDIKIDIISTRE HHCHHEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCC EDIIASKTFSGRSAQVTKKRANTLDGITGSNLFSGGSSTDQLRIAFYDTIDKIVEFLEDK CHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHC ML CC >Mature Secondary Structure MYHLYYLSRFLVSRLYKTLPLLVIASFSTSLLGCSNSSNSVSKTDPCEIIVSENSAKEST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEECCCCHHHH LKEAESNETLRGIRSHTTRKVVLMPITSATGTSNANPYMGAMMGTSQSSGAELTGFATEI HHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHH MNQAFRNEGIKTVAWFKVSKKLKEVLNTSSGNSYSGVNMFGGNQTQVNDENLNEVIEVAK HHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH ELDACYVVRPVILKSSNTSNTQTSYNPVGLALGFGGLAGSTKTTNNAEIDIKIDIISTRE HHCHHEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCC EDIIASKTFSGRSAQVTKKRANTLDGITGSNLFSGGSSTDQLRIAFYDTIDKIVEFLEDK CHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHC ML CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA