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The map label for this gene is 124026270

Identifier: 124026270

GI number: 124026270

Start: 1269802

End: 1271292

Strand: Direct

Name: 124026270

Synonym: NATL1_15641

Alternate gene names: NA

Gene position: 1269802-1271292 (Clockwise)

Preceding gene: 124026269

Following gene: 124026271

Centisome position: 68.1

GC content: 28.91

Gene sequence:

>1491_bases
TTGAGAAAGATTTTCCTGATTTTTCCAAATCAATTATTCAAAATAAAAAAACAATTTACTGACGTTAGTCATATTGCTCT
GATCCAAGATAGCTTATTTTTTGGTTGTGATTCTCAATGGCAACAAAAGTTTCATTGTAACAAAATAATTTTCCACAAAG
CTACTATGGACTCTTACGAAGAAGATCTCAAATCTCAGGGGTTCAATGTAATTTATTTAAAACATCAAAGAGAAAGCAGA
ACAGAAGATAATCTCAATTATCTCTCAGAAAAAGGTTTTAACTATTTCATCACTTATGAAGCGTTTGATTGGTCGCTAGA
AAAAAGAATTAAGGATTTCTCTTTGAAAAAGAATATCAAGTTGGAAATAAGAAAAAATGATATGTTTTTAACTTGTAAAG
ATATATCTGAAGAAATACTTAATCAAAAAAAAATTTATGGAATGCAGAAATTTTATAAGATTCAAAGAAAAAGCCTAAAT
ATACTTATCGAAAAAGATGGTTCGCCAACAGGGGGGACATGGAGTTTTGACAAAATGAACAGAAAGAAGCTTCCAAATTC
AATTGAAGTTCCTAGAATACCAACTATAAAAACAAGCAGATTACTAGATAAAGCTAAGAAAGAAGTTTCTATAAATTATA
AAGATTATTATGGGAGCACAGAAAACTTTAATTATCCATTGTCTCATAAAGATGCTGAAGAATGGTTAGATAATTTTTTA
ATTGAAAGATTTAATTTATTTGGAGATTATGAAGATGCAATACATTCAAATCATAGGACACTTTGGCATAGTGTTCTTTC
TCCATTAATTAATTCCGGATTACTTACTCCGAGACAAATAATAGATAAATCATGGGAGTTTTATCAATCAAACAATATTG
GGATTAATTGCTATGAAGGATTTGTTAGACAAATTATTGGCTGGCGTGAATTTATCCTATTAATGTATAAACGAAATAGT
TTAGAACTAAGAAATGGAAATTTCTGGGATTTTGAGGACAAACCAATACCCTTAAGTTTTTACACTGGTCAAACAGGAAT
AAGGCCTTTAGATGACTCAATAAAAAATATTTTAGAGACAGGATATGCTCATCATATAGAAAGACTAATGATAGTTGGAA
ATTTAATGCTTCTATGCAGATTTCATCCAAATCAAGTATACAAATGGTTTATGGAATTATTTATAGATTCATATGATTGG
GTTATGGTTCCAAATGTTTATGGAATGAGTCAATTTTCAGATGGAGGACTATTTACAACCAAACCATATATTTCTGGCTC
TAATTATATTCGAAAAATGTCTAACTATAAATCTGAAGATTGGTGCTCAACTTGGGATAGTCTTTTTTGGACATTTATAG
ATGATTATAAAAATAAGTTCAAGGACCAATATCGTTTGTCAATGATTTTAAGGAATTTAGAAAAAATGGACCCTAATAAA
AAAATGAACCACAGACGTAATGCTAATGAATTCTTGTCTAAACTAAATTAA

Upstream 100 bases:

>100_bases
CCATGTTGAGTTTTTTCGCACTCAAAAAAGAATCCAGTTATTTTATAAAATTAACTTCTTAAATATTTTTGAGAAGTAAC
AAATTTATTAATCGACTAAA

Downstream 100 bases:

>100_bases
TAATTTAAACTCAGATATTTAGAACAAAAAAACTTCTATAAACTTTGTCTAGGTGTTGTTTTTACTCCAAAAGAGCACTC
TCGAGAGGAAGTGAATTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MRKIFLIFPNQLFKIKKQFTDVSHIALIQDSLFFGCDSQWQQKFHCNKIIFHKATMDSYEEDLKSQGFNVIYLKHQRESR
TEDNLNYLSEKGFNYFITYEAFDWSLEKRIKDFSLKKNIKLEIRKNDMFLTCKDISEEILNQKKIYGMQKFYKIQRKSLN
ILIEKDGSPTGGTWSFDKMNRKKLPNSIEVPRIPTIKTSRLLDKAKKEVSINYKDYYGSTENFNYPLSHKDAEEWLDNFL
IERFNLFGDYEDAIHSNHRTLWHSVLSPLINSGLLTPRQIIDKSWEFYQSNNIGINCYEGFVRQIIGWREFILLMYKRNS
LELRNGNFWDFEDKPIPLSFYTGQTGIRPLDDSIKNILETGYAHHIERLMIVGNLMLLCRFHPNQVYKWFMELFIDSYDW
VMVPNVYGMSQFSDGGLFTTKPYISGSNYIRKMSNYKSEDWCSTWDSLFWTFIDDYKNKFKDQYRLSMILRNLEKMDPNK
KMNHRRNANEFLSKLN

Sequences:

>Translated_496_residues
MRKIFLIFPNQLFKIKKQFTDVSHIALIQDSLFFGCDSQWQQKFHCNKIIFHKATMDSYEEDLKSQGFNVIYLKHQRESR
TEDNLNYLSEKGFNYFITYEAFDWSLEKRIKDFSLKKNIKLEIRKNDMFLTCKDISEEILNQKKIYGMQKFYKIQRKSLN
ILIEKDGSPTGGTWSFDKMNRKKLPNSIEVPRIPTIKTSRLLDKAKKEVSINYKDYYGSTENFNYPLSHKDAEEWLDNFL
IERFNLFGDYEDAIHSNHRTLWHSVLSPLINSGLLTPRQIIDKSWEFYQSNNIGINCYEGFVRQIIGWREFILLMYKRNS
LELRNGNFWDFEDKPIPLSFYTGQTGIRPLDDSIKNILETGYAHHIERLMIVGNLMLLCRFHPNQVYKWFMELFIDSYDW
VMVPNVYGMSQFSDGGLFTTKPYISGSNYIRKMSNYKSEDWCSTWDSLFWTFIDDYKNKFKDQYRLSMILRNLEKMDPNK
KMNHRRNANEFLSKLN
>Mature_496_residues
MRKIFLIFPNQLFKIKKQFTDVSHIALIQDSLFFGCDSQWQQKFHCNKIIFHKATMDSYEEDLKSQGFNVIYLKHQRESR
TEDNLNYLSEKGFNYFITYEAFDWSLEKRIKDFSLKKNIKLEIRKNDMFLTCKDISEEILNQKKIYGMQKFYKIQRKSLN
ILIEKDGSPTGGTWSFDKMNRKKLPNSIEVPRIPTIKTSRLLDKAKKEVSINYKDYYGSTENFNYPLSHKDAEEWLDNFL
IERFNLFGDYEDAIHSNHRTLWHSVLSPLINSGLLTPRQIIDKSWEFYQSNNIGINCYEGFVRQIIGWREFILLMYKRNS
LELRNGNFWDFEDKPIPLSFYTGQTGIRPLDDSIKNILETGYAHHIERLMIVGNLMLLCRFHPNQVYKWFMELFIDSYDW
VMVPNVYGMSQFSDGGLFTTKPYISGSNYIRKMSNYKSEDWCSTWDSLFWTFIDDYKNKFKDQYRLSMILRNLEKMDPNK
KMNHRRNANEFLSKLN

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59417; Mature: 59417

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIFLIFPNQLFKIKKQFTDVSHIALIQDSLFFGCDSQWQQKFHCNKIIFHKATMDSYE
CCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECHHHHHH
EDLKSQGFNVIYLKHQRESRTEDNLNYLSEKGFNYFITYEAFDWSLEKRIKDFSLKKNIK
HHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCCEE
LEIRKNDMFLTCKDISEEILNQKKIYGMQKFYKIQRKSLNILIEKDGSPTGGTWSFDKMN
EEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHCH
RKKLPNSIEVPRIPTIKTSRLLDKAKKEVSINYKDYYGSTENFNYPLSHKDAEEWLDNFL
HHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHH
IERFNLFGDYEDAIHSNHRTLWHSVLSPLINSGLLTPRQIIDKSWEFYQSNNIGINCYEG
HHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCCEEHHHH
FVRQIIGWREFILLMYKRNSLELRNGNFWDFEDKPIPLSFYTGQTGIRPLDDSIKNILET
HHHHHHHHHHHHHHHEECCCEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
GYAHHIERLMIVGNLMLLCRFHPNQVYKWFMELFIDSYDWVMVPNVYGMSQFSDGGLFTT
HHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEE
KPYISGSNYIRKMSNYKSEDWCSTWDSLFWTFIDDYKNKFKDQYRLSMILRNLEKMDPNK
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KMNHRRNANEFLSKLN
HHHHCCCHHHHHHHCC
>Mature Secondary Structure
MRKIFLIFPNQLFKIKKQFTDVSHIALIQDSLFFGCDSQWQQKFHCNKIIFHKATMDSYE
CCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECHHHHHH
EDLKSQGFNVIYLKHQRESRTEDNLNYLSEKGFNYFITYEAFDWSLEKRIKDFSLKKNIK
HHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCCEE
LEIRKNDMFLTCKDISEEILNQKKIYGMQKFYKIQRKSLNILIEKDGSPTGGTWSFDKMN
EEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHCH
RKKLPNSIEVPRIPTIKTSRLLDKAKKEVSINYKDYYGSTENFNYPLSHKDAEEWLDNFL
HHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHH
IERFNLFGDYEDAIHSNHRTLWHSVLSPLINSGLLTPRQIIDKSWEFYQSNNIGINCYEG
HHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCCEEHHHH
FVRQIIGWREFILLMYKRNSLELRNGNFWDFEDKPIPLSFYTGQTGIRPLDDSIKNILET
HHHHHHHHHHHHHHHEECCCEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
GYAHHIERLMIVGNLMLLCRFHPNQVYKWFMELFIDSYDWVMVPNVYGMSQFSDGGLFTT
HHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEE
KPYISGSNYIRKMSNYKSEDWCSTWDSLFWTFIDDYKNKFKDQYRLSMILRNLEKMDPNK
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KMNHRRNANEFLSKLN
HHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA