Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026257

Identifier: 124026257

GI number: 124026257

Start: 1260318

End: 1260659

Strand: Direct

Name: 124026257

Synonym: NATL1_15511

Alternate gene names: NA

Gene position: 1260318-1260659 (Clockwise)

Preceding gene: 124026255

Following gene: 124026259

Centisome position: 67.59

GC content: 34.8

Gene sequence:

>342_bases
ATGCCATTCATTCAAATCAACACATCCTCAAAAAGTGTTGTAGAAAATGATGATTTGCTCCAAAAAGATATTTCAAAAAT
GATTGCTGTTTTAACCGGAAAACCGGAAAATTACGTAATGACGATGATCCAAAAAAATGCCAAAATGACATTTGCTGGAT
CCGATGAACCATGCTGTTTTATCAAGGTTCAATCAATTGGCTCGCTAAACCCATCCTCGATGAGCAAGGCTTTGTGCGAG
TTAATTGCATCTAAAACCAATATAAATACAAATAGAATTTATATTGAATTTTTCGACGTTGAAGCCTCAAATTGGGGATT
CAATGGTTCAACATTTGGATAG

Upstream 100 bases:

>100_bases
TCTGTTGATAATTTTGGAGAAAAGAGGCTTAGATCTTTCTATCTTTTTAAAAATCAATCTCCCATTCAAGTATTAATATC
TGTCAAAGACTGATTCACTT

Downstream 100 bases:

>100_bases
GAAGGAAATTTATTATCTTTTGTAATCATTATTGAAAATATCTTAATTGAATCAACCAACTATTCATTTAACTAAGAGAG
TTCACAACCCTTTTCAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Macrophage Migration Inhibitory Factor; ATLS1-Like Light-Inducible Protein; Phenylpyruvate Tautomerase; Macrophage Migration Inhibitory Factor Superfamily; MIF/Phenylpyruvate Tautomerase Family Protein; Macrophage Migration Inhibitory Factor Family; Glycosyl Transferase

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPFIQINTSSKSVVENDDLLQKDISKMIAVLTGKPENYVMTMIQKNAKMTFAGSDEPCCFIKVQSIGSLNPSSMSKALCE
LIASKTNINTNRIYIEFFDVEASNWGFNGSTFG

Sequences:

>Translated_113_residues
MPFIQINTSSKSVVENDDLLQKDISKMIAVLTGKPENYVMTMIQKNAKMTFAGSDEPCCFIKVQSIGSLNPSSMSKALCE
LIASKTNINTNRIYIEFFDVEASNWGFNGSTFG
>Mature_112_residues
PFIQINTSSKSVVENDDLLQKDISKMIAVLTGKPENYVMTMIQKNAKMTFAGSDEPCCFIKVQSIGSLNPSSMSKALCEL
IASKTNINTNRIYIEFFDVEASNWGFNGSTFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4505185, Length=115, Percent_Identity=35.6521739130435, Blast_Score=82, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17556260, Length=116, Percent_Identity=30.1724137931034, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12486; Mature: 12355

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFIQINTSSKSVVENDDLLQKDISKMIAVLTGKPENYVMTMIQKNAKMTFAGSDEPCCF
CCEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCHHEEEEEECCCEEEECCCCCCEEE
IKVQSIGSLNPSSMSKALCELIASKTNINTNRIYIEFFDVEASNWGFNGSTFG
EEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
PFIQINTSSKSVVENDDLLQKDISKMIAVLTGKPENYVMTMIQKNAKMTFAGSDEPCCF
CEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCHHEEEEEECCCEEEECCCCCCEEE
IKVQSIGSLNPSSMSKALCELIASKTNINTNRIYIEFFDVEASNWGFNGSTFG
EEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA