| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026247
Identifier: 124026247
GI number: 124026247
Start: 1255457
End: 1256695
Strand: Direct
Name: 124026247
Synonym: NATL1_15411
Alternate gene names: NA
Gene position: 1255457-1256695 (Clockwise)
Preceding gene: 124026245
Following gene: 124026249
Centisome position: 67.33
GC content: 30.43
Gene sequence:
>1239_bases ATGAATTTGTTCTCAACTTCTATTGTTAGCAATTATTGGGAGAAATTCCCTGTATCCCTAAGACTAATCATAAAAGCTCG TTTATGGACAGCAATAGGAGCAGGAGGGGTATTGTATTTAAGTCCGATAATATTCAATAGTTTAGGTTTTTCAGCAGAGC AAATCGGAAGAGGAATAACCACAGCGGCATTTGCTGGAATAACGACAAGATTTGGGACGGGATATTTACTTGACAAAAAA TTTAGCTCTATAAAAGCAATTAAAGTTGCATGTTTATTTGCAATTTTATCGGATTTTATACTTTTTTATTCGCAAAATTT CTTAGCTTTCCTTTGTGGTCAGTTTTTCTTAGGAGCTGCAGCTGGAATATATTGGCCTTCTGCGGAATTAGCTATTCCAT CAAATTGCAATACCAAAATAAAATCAAGTGAAGGTTATTCTCTTGCAAGAAGTGCTGATGCAATTGGAGTCACATTAGGG GTCTTACTTGGTACTATAGGATCTTATTTTGAATTCCCAAGAATAATATATTTAATAGATATTTTATGCATGTTATATAT ATTAAATATATTATTAAATAAGCTAGACAAAAGTAGAAACAAAATTGCTTTCAAGATCAAAGGCGATTTAGATGTTAAAT ATAAATCTCTTGAAAAAAAATACAATCTGAAATGGATAATAAGTTTACTACCTTTATTATTAATAACTCTATTTGTAACA GGGATAATGAGTTTATTACAAAGCATCCTTCCTATAGATTTAGCGAACGGAGGGATAATAAGGCCACCATTCACAGACCA AAAAGTAGCTACATTATTAACAATTAAACTCATTTTACTTGCTTTTTTTCAATGGCCAGTGGGTTATATTTTAAGAAATA AAAATTCACCTTTTAAATTCAGATTATGCTTAATATCTCTACTCATAGGTTTTATTTTTTTGTCACTTTCAAATTTCTTA CTTGATGGATATCTATTAATACTTATAGCTTTCATACCACTAACAATATCTCTATGTATATTTTTACCCTCTGCTTCAGA TGCAATTATAAATTCTGCTCCCATTAAATATCAAGGTTCAGCCATAGCATTATATTCACAATGTTTTGGCATTAGTTCTT TAACAGTACCTTGGATGGCGGGAAAATTAATTGACACTTATGATACAGCCCTTCAACTATGGTTAATTGTTAGTATTCTT TGTATACTTTTAGTACCAATATCTAAGAATATTAAATAA
Upstream 100 bases:
>100_bases AAATGAATTTCAAATCTCTCTGCTGCTTGAAGTTTTGGATAAAAACAATAAGGAGCTAGTAAGCTTCCAACTGTTCCAAG AACAACTAATTTTTTAATGA
Downstream 100 bases:
>100_bases TAAAATATTTAATTCAATTCCTATTCATCTCTTCAATTCTTAATTCCCTTAGATATAGAAAAAGAGGAGCTGAAAAAGCA AATGCGATTGTAAATGTAGT
Product: major facilitator superfamily multidrug-efflux transporter
Products: NA
Alternate protein names: Facilitator Superfamily Permease; Permease Facilitator Superfamily; Transporter Facilitator Family Protein; Facilitator Superfamily Multidrug-Efflux Transporter-Like
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MNLFSTSIVSNYWEKFPVSLRLIIKARLWTAIGAGGVLYLSPIIFNSLGFSAEQIGRGITTAAFAGITTRFGTGYLLDKK FSSIKAIKVACLFAILSDFILFYSQNFLAFLCGQFFLGAAAGIYWPSAELAIPSNCNTKIKSSEGYSLARSADAIGVTLG VLLGTIGSYFEFPRIIYLIDILCMLYILNILLNKLDKSRNKIAFKIKGDLDVKYKSLEKKYNLKWIISLLPLLLITLFVT GIMSLLQSILPIDLANGGIIRPPFTDQKVATLLTIKLILLAFFQWPVGYILRNKNSPFKFRLCLISLLIGFIFLSLSNFL LDGYLLILIAFIPLTISLCIFLPSASDAIINSAPIKYQGSAIALYSQCFGISSLTVPWMAGKLIDTYDTALQLWLIVSIL CILLVPISKNIK
Sequences:
>Translated_412_residues MNLFSTSIVSNYWEKFPVSLRLIIKARLWTAIGAGGVLYLSPIIFNSLGFSAEQIGRGITTAAFAGITTRFGTGYLLDKK FSSIKAIKVACLFAILSDFILFYSQNFLAFLCGQFFLGAAAGIYWPSAELAIPSNCNTKIKSSEGYSLARSADAIGVTLG VLLGTIGSYFEFPRIIYLIDILCMLYILNILLNKLDKSRNKIAFKIKGDLDVKYKSLEKKYNLKWIISLLPLLLITLFVT GIMSLLQSILPIDLANGGIIRPPFTDQKVATLLTIKLILLAFFQWPVGYILRNKNSPFKFRLCLISLLIGFIFLSLSNFL LDGYLLILIAFIPLTISLCIFLPSASDAIINSAPIKYQGSAIALYSQCFGISSLTVPWMAGKLIDTYDTALQLWLIVSIL CILLVPISKNIK >Mature_412_residues MNLFSTSIVSNYWEKFPVSLRLIIKARLWTAIGAGGVLYLSPIIFNSLGFSAEQIGRGITTAAFAGITTRFGTGYLLDKK FSSIKAIKVACLFAILSDFILFYSQNFLAFLCGQFFLGAAAGIYWPSAELAIPSNCNTKIKSSEGYSLARSADAIGVTLG VLLGTIGSYFEFPRIIYLIDILCMLYILNILLNKLDKSRNKIAFKIKGDLDVKYKSLEKKYNLKWIISLLPLLLITLFVT GIMSLLQSILPIDLANGGIIRPPFTDQKVATLLTIKLILLAFFQWPVGYILRNKNSPFKFRLCLISLLIGFIFLSLSNFL LDGYLLILIAFIPLTISLCIFLPSASDAIINSAPIKYQGSAIALYSQCFGISSLTVPWMAGKLIDTYDTALQLWLIVSIL CILLVPISKNIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45569; Mature: 45569
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFSTSIVSNYWEKFPVSLRLIIKARLWTAIGAGGVLYLSPIIFNSLGFSAEQIGRGIT CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHH TAAFAGITTRFGTGYLLDKKFSSIKAIKVACLFAILSDFILFYSQNFLAFLCGQFFLGAA HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGIYWPSAELAIPSNCNTKIKSSEGYSLARSADAIGVTLGVLLGTIGSYFEFPRIIYLID HHCCCCCCCEECCCCCCCCEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ILCMLYILNILLNKLDKSRNKIAFKIKGDLDVKYKSLEKKYNLKWIISLLPLLLITLFVT HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GIMSLLQSILPIDLANGGIIRPPFTDQKVATLLTIKLILLAFFQWPVGYILRNKNSPFKF HHHHHHHHHCCEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH RLCLISLLIGFIFLSLSNFLLDGYLLILIAFIPLTISLCIFLPSASDAIINSAPIKYQGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEECCC AIALYSQCFGISSLTVPWMAGKLIDTYDTALQLWLIVSILCILLVPISKNIK CHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNLFSTSIVSNYWEKFPVSLRLIIKARLWTAIGAGGVLYLSPIIFNSLGFSAEQIGRGIT CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHH TAAFAGITTRFGTGYLLDKKFSSIKAIKVACLFAILSDFILFYSQNFLAFLCGQFFLGAA HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGIYWPSAELAIPSNCNTKIKSSEGYSLARSADAIGVTLGVLLGTIGSYFEFPRIIYLID HHCCCCCCCEECCCCCCCCEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ILCMLYILNILLNKLDKSRNKIAFKIKGDLDVKYKSLEKKYNLKWIISLLPLLLITLFVT HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GIMSLLQSILPIDLANGGIIRPPFTDQKVATLLTIKLILLAFFQWPVGYILRNKNSPFKF HHHHHHHHHCCEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH RLCLISLLIGFIFLSLSNFLLDGYLLILIAFIPLTISLCIFLPSASDAIINSAPIKYQGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEECCC AIALYSQCFGISSLTVPWMAGKLIDTYDTALQLWLIVSILCILLVPISKNIK CHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA