| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026212
Identifier: 124026212
GI number: 124026212
Start: 1219118
End: 1219675
Strand: Reverse
Name: 124026212
Synonym: NATL1_15061
Alternate gene names: NA
Gene position: 1219675-1219118 (Counterclockwise)
Preceding gene: 124026216
Following gene: 124026211
Centisome position: 65.41
GC content: 30.82
Gene sequence:
>558_bases ATGGCTATTTCTCATACATCTGGTCCTGGAAGAACTACAAAATCTTCAGTAGGTATAGATAGACTTAGAATTGATTTTGA TAGTAGTTTAAGGCGGTGGTTTGATCGAAATATTGGTTTATGGCATTCTAAAAGACAATATTTTTTTGATGAAGAAAAGG CTATTAATTTGGAAATGTATATAAATGTAAGTAAGTTAATTCAAAGTGATTTGGAATTTGAAAGCTATCGGTTTAATTGG TGGTGCGAAGATCAAAAAGATTTTTTTATTAAAAAGCCAAATTATAAAAGTGAGGGTGAAATAACTGCTCGATTACAAGG CCATCAATTAATTCGTGATTGCGCTTATTTATCTGATTCTTCAGGGATATCAAATATTAGGCAAGTGGATGAACATGAGT TGATCTTTGAGTCTAATTATGATAACTGGCACGTATTAGAACATACTCGCTTAATAGACCAAGATAAATTTAGATCCAGA ACTATTTATAGTTGGTTTAATGATAAGTTGAAAATAGTTGAAAATCACCATGAAATAAGGGTTAAGAATCCCAACTAA
Upstream 100 bases:
>100_bases AGCAATCTAAATAATTACGCATACCTTAAGGTAATGAGACTCGTTTTAGGAATTAGCTAATAATTAAGAGATACCTTTTT AATTTTCTCAGTTCCAGAAA
Downstream 100 bases:
>100_bases TGACTTTATAAAATCTATTTATATGGACCCTAATGTATGATATAGATCTTATCTGAAAGTAAAGATTTTTTAATAAATTC TTTTTGCATCAGATGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MAISHTSGPGRTTKSSVGIDRLRIDFDSSLRRWFDRNIGLWHSKRQYFFDEEKAINLEMYINVSKLIQSDLEFESYRFNW WCEDQKDFFIKKPNYKSEGEITARLQGHQLIRDCAYLSDSSGISNIRQVDEHELIFESNYDNWHVLEHTRLIDQDKFRSR TIYSWFNDKLKIVENHHEIRVKNPN
Sequences:
>Translated_185_residues MAISHTSGPGRTTKSSVGIDRLRIDFDSSLRRWFDRNIGLWHSKRQYFFDEEKAINLEMYINVSKLIQSDLEFESYRFNW WCEDQKDFFIKKPNYKSEGEITARLQGHQLIRDCAYLSDSSGISNIRQVDEHELIFESNYDNWHVLEHTRLIDQDKFRSR TIYSWFNDKLKIVENHHEIRVKNPN >Mature_184_residues AISHTSGPGRTTKSSVGIDRLRIDFDSSLRRWFDRNIGLWHSKRQYFFDEEKAINLEMYINVSKLIQSDLEFESYRFNWW CEDQKDFFIKKPNYKSEGEITARLQGHQLIRDCAYLSDSSGISNIRQVDEHELIFESNYDNWHVLEHTRLIDQDKFRSRT IYSWFNDKLKIVENHHEIRVKNPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22282; Mature: 22151
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISHTSGPGRTTKSSVGIDRLRIDFDSSLRRWFDRNIGLWHSKRQYFFDEEKAINLEMY CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEE INVSKLIQSDLEFESYRFNWWCEDQKDFFIKKPNYKSEGEITARLQGHQLIRDCAYLSDS EEHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHCCCC SGISNIRQVDEHELIFESNYDNWHVLEHTRLIDQDKFRSRTIYSWFNDKLKIVENHHEIR CCHHHHHHCCCCEEEEECCCCCEEEEEHHHHCCCHHHCCCEEHHHHCCEEEEEECCCEEE VKNPN EECCC >Mature Secondary Structure AISHTSGPGRTTKSSVGIDRLRIDFDSSLRRWFDRNIGLWHSKRQYFFDEEKAINLEMY CCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEE INVSKLIQSDLEFESYRFNWWCEDQKDFFIKKPNYKSEGEITARLQGHQLIRDCAYLSDS EEHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHCCCC SGISNIRQVDEHELIFESNYDNWHVLEHTRLIDQDKFRSRTIYSWFNDKLKIVENHHEIR CCHHHHHHCCCCEEEEECCCCCEEEEEHHHHCCCHHHCCCEEHHHHCCEEEEEECCCEEE VKNPN EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA